CX671756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18 Identity = 51/177 (28.81%), Postives = 94/177 (53.11%), Query Frame = -3 Query: 277 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHE-ALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 804 ++E+G +K G P+ E++++ E + A+ G+ V +K V +D+ GFV ++ K+ P + F +Q+ I+ I G++ V+ HT+ V +L+ K+++ + ++ +K P F K G + + P+ VET+ DYP LGRF +RD T+A+G I + Sbjct: 508 KIESGHIKKGQSTLLMPNKTAVEIQNIYNETENEVDMAMCGEQVKLRIKGVEEEDISPGFVLTSPKN-PIKSVTKFVAQIAIVELKSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 683
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 50/174 (28.74%), Postives = 93/174 (53.45%), Query Frame = -3 Query: 286 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEA-LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 804 ++E+G +K G + P+ EV ++ EA A G+ V ++ + +DL G+V S S + P + F +Q+ I+ + G++ V+ HT+ V F++L+ + + + + +K P F K G + + T+P+ +E++ DYP LGRF +RD QT+A+G + Sbjct: 565 KIESGHVKKGQNLLVMPNKTQVEVTTIYNETEAEADSAFCGEQVRLRLRGIEEEDLSAGYVLS-SINHPVKTVTRFEAQIAIVELKSILSTGFSCVMHVHTAIEEVTFTQLLHNLQKGTNRRSKKAPAFAKQGMKIIAVLETTEPVCIESYDDYPQLGRFTLRDQGQTIAIGKV 737
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18 Identity = 49/181 (27.07%), Postives = 95/181 (52.49%), Query Frame = -3 Query: 265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804 ++E+G + G + P+ EV + PG+N+ +K + +++ GF+ + ++ F +Q++I+ H I GY VL HT V+ + L+ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 320 KLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDL-NNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 499
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18 Identity = 49/181 (27.07%), Postives = 95/181 (52.49%), Query Frame = -3 Query: 265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804 ++E+G + G + P+ EV + PG+N+ +K + +++ GF+ + ++ F +Q++I+ H I GY VL HT V+ + L+ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 320 KLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 499
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_KLULA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Kluyveromyces lactis GN=SUP35 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18 Identity = 49/177 (27.68%), Postives = 96/177 (54.24%), Query Frame = -3 Query: 277 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEA-LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 804 ++E+G ++ G P+ + E+ ++ E+ + A+ G+ V +K V +++ GFV ++ K+ P + F +Q+ I+ + G++ V+ HT+ V + L+ K+++ S ++ +K P F K G + + +P+ VET+ DYP LGRF +RD T+A+G I + Sbjct: 522 KIESGHIRKGNQTLLMPNRTSVEILTIYNETESEVDMAVCGEQVRLRIKGVEEEEISAGFVLTSPKN-PVKNVTRFVAQIAIVELKSIMSAGFSCVMHIHTAIEEVTVTRLLHKLEKGSNRKSKKPPAFAKKGMKIIAVIETNEPVCVETYDDYPQLGRFTLRDQGTTIAIGKIVKI 697
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18 Identity = 54/176 (30.68%), Postives = 96/176 (54.55%), Query Frame = -3 Query: 286 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQE---ALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 804 ++E+G +K G + P+ EV ++ +E QE A G+ V +K + +DL+ G+V ++ K+ P + F +Q+ I+ + NG++ V+ HT+ VKF EL K+++ + ++ +K P F K G + + + + ET+ DYP LGRF +RD T+A+G I Sbjct: 539 KIESGHVKKGTNLIMMPNKTPIEVLTI--FNETEQECDTAFSGEQVRLKIKGIEEEDLQPGYVLTSPKN-PVKTVTRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFIELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVGELVCAETYKDYPQLGRFTLRDQGTTIAIGKI 711
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18 Identity = 49/181 (27.07%), Postives = 94/181 (51.93%), Query Frame = -3 Query: 265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804 ++E+G + G + P+ + EV + PG+N+ +K + +++ GF+ + F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 453 KLESGSIFKGQQLVMMPNKHSVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 632
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17 Identity = 49/181 (27.07%), Postives = 94/181 (51.93%), Query Frame = -3 Query: 265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804 ++E+G + G + P+ EV + PG+N+ +K + +++ GF+ + + F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 449 KLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17 Identity = 49/181 (27.07%), Postives = 94/181 (51.93%), Query Frame = -3 Query: 265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804 ++E+G + G + P+ EV + PG+N+ +K + +++ GF+ + + F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 449 KLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17 Identity = 56/179 (31.28%), Postives = 95/179 (53.07%), Query Frame = -3 Query: 277 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQE---ALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 804 ++E+G +K G + P+ + EV V + +E QE A G+ V +K V +DL G+V + S P + F +Q+ I+ + NG++ V+ HT+ V F EL K+++ + ++ +K P F K G + + + + ET++DYP LGRF +RD T+A+G I V Sbjct: 525 KIESGHIKKGGNLLLMPNKASIEV--VAIFNETEQECDAAFCGEQVRLKIKGVEEEDLAPGYVLT-SPLKPIKTITRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVTFIELKHKLEKGTNRKSKKPPAFAKKGMKVIAILETNESVCAETYADYPQLGRFTLRDQGTTIAIGKITKV 700 The following BLAST results are available for this feature:
BLAST of CX671756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671756 ID=CX671756; Name=CX671756; organism=Citrus sinensis; type=EST; length=845bpback to top |