CX671756

Overview
NameCX671756
Unique NameCX671756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 51/177 (28.81%), Postives = 94/177 (53.11%), Query Frame = -3
Query:  277 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHE-ALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 804
            ++E+G +K G      P+    E++++    E  +  A+ G+ V   +K V  +D+  GFV ++ K+ P +    F +Q+ I+     I  G++ V+  HT+   V   +L+ K+++ + ++ +K P F K G   +  +    P+ VET+ DYP LGRF +RD   T+A+G I  +
Sbjct:  508 KIESGHIKKGQSTLLMPNKTAVEIQNIYNETENEVDMAMCGEQVKLRIKGVEEEDISPGFVLTSPKN-PIKSVTKFVAQIAIVELKSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 683          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 50/174 (28.74%), Postives = 93/174 (53.45%), Query Frame = -3
Query:  286 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEA-LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 804
            ++E+G +K G  +   P+    EV ++    EA    A  G+ V   ++ +  +DL  G+V S S + P +    F +Q+ I+     +  G++ V+  HT+   V F++L+  + + + +  +K P F K G   +  +  T+P+ +E++ DYP LGRF +RD  QT+A+G +
Sbjct:  565 KIESGHVKKGQNLLVMPNKTQVEVTTIYNETEAEADSAFCGEQVRLRLRGIEEEDLSAGYVLS-SINHPVKTVTRFEAQIAIVELKSILSTGFSCVMHVHTAIEEVTFTQLLHNLQKGTNRRSKKAPAFAKQGMKIIAVLETTEPVCIESYDDYPQLGRFTLRDQGQTIAIGKV 737          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 49/181 (27.07%), Postives = 95/181 (52.49%), Query Frame = -3
Query:  265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804
            ++E+G +  G  +   P+    EV  +           PG+N+   +K +  +++  GF+  +  ++       F +Q++I+ H   I  GY  VL  HT    V+ + L+  +D++SG++ +  P+F+K     + ++     + +ETF D+P +GRF +RD  +T+A+G V+K V +KD
Sbjct:  320 KLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDL-NNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 499          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 49/181 (27.07%), Postives = 95/181 (52.49%), Query Frame = -3
Query:  265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804
            ++E+G +  G  +   P+    EV  +           PG+N+   +K +  +++  GF+  +  ++       F +Q++I+ H   I  GY  VL  HT    V+ + L+  +D++SG++ +  P+F+K     + ++     + +ETF D+P +GRF +RD  +T+A+G V+K V +KD
Sbjct:  320 KLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 499          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_KLULA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Kluyveromyces lactis GN=SUP35 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 49/177 (27.68%), Postives = 96/177 (54.24%), Query Frame = -3
Query:  277 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEA-LQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 804
            ++E+G ++ G      P+  + E+ ++    E+ +  A+ G+ V   +K V  +++  GFV ++ K+ P +    F +Q+ I+     +  G++ V+  HT+   V  + L+ K+++ S ++ +K P F K G   +  +   +P+ VET+ DYP LGRF +RD   T+A+G I  +
Sbjct:  522 KIESGHIRKGNQTLLMPNRTSVEILTIYNETESEVDMAVCGEQVRLRIKGVEEEEISAGFVLTSPKN-PVKNVTRFVAQIAIVELKSIMSAGFSCVMHIHTAIEEVTVTRLLHKLEKGSNRKSKKPPAFAKKGMKIIAVIETNEPVCVETYDDYPQLGRFTLRDQGTTIAIGKIVKI 697          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 54/176 (30.68%), Postives = 96/176 (54.55%), Query Frame = -3
Query:  286 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQE---ALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 804
            ++E+G +K G  +   P+    EV ++   +E  QE   A  G+ V   +K +  +DL+ G+V ++ K+ P +    F +Q+ I+     + NG++ V+  HT+   VKF EL  K+++ + ++ +K P F K G   +  +   + +  ET+ DYP LGRF +RD   T+A+G I
Sbjct:  539 KIESGHVKKGTNLIMMPNKTPIEVLTI--FNETEQECDTAFSGEQVRLKIKGIEEEDLQPGYVLTSPKN-PVKTVTRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFIELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVGELVCAETYKDYPQLGRFTLRDQGTTIAIGKI 711          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 49/181 (27.07%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804
            ++E+G +  G  +   P+  + EV  +           PG+N+   +K +  +++  GF+     +        F  Q++I+ H   I  GY  VL  HT    V+ + L++ +D++SG++ +  P+F+K     + ++     + +ETF D+P +GRF +RD  +T+A+G V+K V +KD
Sbjct:  453 KLESGSIFKGQQLVMMPNKHSVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 632          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 49/181 (27.07%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804
            ++E+G +  G  +   P+    EV  +           PG+N+   +K +  +++  GF+  +  +        F  Q++I+ H   I  GY  VL  HT    V+ + L++ +D++SG++ +  P+F+K     + ++     + +ETF D+P +GRF +RD  +T+A+G V+K V +KD
Sbjct:  449 KLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 49/181 (27.07%), Postives = 94/181 (51.93%), Query Frame = -3
Query:  265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKSVEKKD 804
            ++E+G +  G  +   P+    EV  +           PG+N+   +K +  +++  GF+  +  +        F  Q++I+ H   I  GY  VL  HT    V+ + L++ +D++SG++ +  P+F+K     + ++     + +ETF D+P +GRF +RD  +T+A+G V+K V +KD
Sbjct:  449 KLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 56/179 (31.28%), Postives = 95/179 (53.07%), Query Frame = -3
Query:  277 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQE---ALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 804
            ++E+G +K G  +   P+  + EV  V + +E  QE   A  G+ V   +K V  +DL  G+V + S   P +    F +Q+ I+     + NG++ V+  HT+   V F EL  K+++ + ++ +K P F K G   +  +   + +  ET++DYP LGRF +RD   T+A+G I  V
Sbjct:  525 KIESGHIKKGGNLLLMPNKASIEV--VAIFNETEQECDAAFCGEQVRLKIKGVEEEDLAPGYVLT-SPLKPIKTITRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVTFIELKHKLEKGTNRKSKKPPAFAKKGMKVIAILETNESVCAETYADYPQLGRFTLRDQGTTIAIGKITKV 700          
The following BLAST results are available for this feature:
BLAST of CX671756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
ERF3_YEAST1.952e-1828.81Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_PICPI3.329e-1828.74Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3A_MOUSE5.678e-1827.07Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3A_HUMAN5.678e-1827.07Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_KLULA9.686e-1827.68Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_CANAL9.686e-1830.68Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3B_MOUSE9.686e-1827.07Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3B_PONAB1.265e-1727.07Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3B_HUMAN1.265e-1727.07Eukaryotic peptide chain release factor GTP-bindin... [more]
ERF3_DEBHA4.807e-1731.28Eukaryotic peptide chain release factor GTP-bindin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A03-A5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671756 ID=CX671756; Name=CX671756; organism=Citrus sinensis; type=EST; length=845bp
GACTAAATTTTCAAAATCGAGCACTAACGGCTAATCTTGAAACAAAATGT
TTGACATCCAAAAACTGGTTTATCAACTTACCAAAAAAAACTCAATGATA
TAAAACCAAATTCAGAGAATTAAAATGAAGTCTACCGTAAAACAAACTAA
AACATGACAAAAATAGCATAAACAGAGAAAATAAAAGCTAACTATAGCAG
ATAGATCCCAAAAAACTCCTCACTTCTTCTTGGCAGCAGACTTGGTGACC
TTGGCACCCGATGGATCCTTCTTTTCAACACTCTTGATCACACCAACAGC
TACAGTCTGACGCATGTCCCTAACAGCAAAACGACCAAGGGGTGGGTAGT
CGGAGAAGGTCTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCATT
CCGGCATCTCCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTGCC
AGATCGCCTGTCAATCTTGGTCACAAGCTCAGAAAACTTGACAGCAATGT
GGGAGGTGTGGCAGTCAAGCACTGGGGCATATCCATTTCCAATCTGGCCA
GGATGGTTCATGATGATGACCTGTGAAGTGAAGTTGGCAGCTTCCCTGGC
CGGATCATCCTTCGAGTTGGAAGCAACAAAACCACGCTTGAGATCCTTGA
CAGCAACGTTCTTCACGTTGAAGCCAACATTGTCACCCGGAAGGGCCTCC
TGCAGAGCTTCGTGGTGCATCTCAACAGACTTAACCTCAGTTGTCAATCC
AGAGGGACCAAATGTCACCACCATACCAGGCTTGAGCACACCGGTCTCAA
CGCGACCCACTGGGACGGGTCCAATGCCACCAATCTTGTACACGT
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