CX671756
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 2.020e-15 Identity = 52/177 (29.38%), Postives = 92/177 (51.98%), Query Frame = -3 Query: 277 RVETGVLKPGMVVTFGPSGLTTEVKSV-EMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 804 ++E G +K V P T EV ++ + E + ++ GD V V+ D++ G+V +++K+ P F +Q+ I+ P + GY+ V+ HT+ V F++L+ K+D+ + K +K P F G + ++ P+ +E F DY +GRF +RD TVAVG + + Sbjct: 487 KIEAGSIKKNSNVLVMPINQTLEVTAIYDEADEEISSSICGDQVRLRVRGDD-SDVQTGYVLTSTKN-PVHATTRFIAQIAILELPSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRKS-KKPPMFATKGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKI 660
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 47/191 (24.61%), Postives = 92/191 (48.17%), Query Frame = -3 Query: 271 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 843 V+K G++E G ++ G + P T VK + +H E + A GD+V + + + + G + K P + F ++++I N I G+ +L T L++ +++ +G+ +K+PKFL G +V++ +P+ +E + D+ LGRF +R T+A GV+ +++ Sbjct: 495 VFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE 684
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.309e-14 Identity = 47/191 (24.61%), Postives = 92/191 (48.17%), Query Frame = -3 Query: 271 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 843 V+K G++E G ++ G + P T VK + +H E + A GD+V + + + + G + K P + F ++++I N I G+ +L T L++ +++ +G+ +K+PKFL G +V++ +P+ +E + D+ LGRF +R T+A GV+ +++ Sbjct: 495 VFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEMKE 684
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.233e-14 Identity = 46/191 (24.08%), Postives = 91/191 (47.64%), Query Frame = -3 Query: 271 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 843 V+K G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F ++++I N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R TVA GV+ +++ Sbjct: 490 VFKDQGSGFCVTGKIEAGYVQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILIFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEIKE 679
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.233e-14 Identity = 45/191 (23.56%), Postives = 91/191 (47.64%), Query Frame = -3 Query: 271 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 843 V+K G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F +++++ N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R TVA GV+ +++ Sbjct: 493 VFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVNLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILVFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEIKE 682
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 45/190 (23.68%), Postives = 90/190 (47.37%), Query Frame = -3 Query: 274 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 843 V+K G++E G ++ G + P T K + +H E + A GD+V + + + + G + K+ P + F ++++I N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R T+A GV+ ++ Sbjct: 497 VFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKE-PIKVCTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIK 685
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_ENCCU (Elongation factor 1-alpha OS=Encephalitozoon cuniculi GN=TEF1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.469e-13 Identity = 44/183 (24.04%), Postives = 91/183 (49.73%), Query Frame = -3 Query: 265 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKR---GFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 804 RVE G + P + +T P+G+ E +SVE+H++ G+N G +K + ++ + G V S + ++ A + I++ P + GY P ++ H + +++++K+ GKE+ + P+ + NG+ ++ KP+V++ + L +FA+ D V +G + +D Sbjct: 300 RVEYGTITPNLKITIQPAGVVGETRSVEIHNKPRSMIPCGENCGVALKGGVIGEIDKVDAGHVISANDENKAVAYPGAKIRTIVVGRPKGLSPGYTPQINFGNCHSPGRIAKILSKV---VGKEVHENPENVANGENFTGIVVFQKPLVIDKMERFQNLAKFALMDSNGVVGIGNVMEPLTRD 479
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.081e-12 Identity = 45/182 (24.73%), Postives = 86/182 (47.25%), Query Frame = -3 Query: 268 RVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQ---IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 804 +VE+G + G + P EV S+ + + A PG+N+ +K + D R + P + + V I++ P + ++ + HT+ V L+ ID ++ E++++P F K GDA +++ + + +E F+ P L RF +RD +T+A G + ++ KK Sbjct: 365 KVESGTISVGQSIHIMPGKTKVEVISLTGDICSFKTARPGENITIALKGIEGDDSIRPGSILAEINRPVPVVSEIEAIVYILDMPEERRLFTPSFSAIFHAHTAVEDVTVKSLIATIDTKTSTEIKQKPTFCKVGDAVKCRLVLGRAVCLEEFTTNPQLARFTIRDSTKTIAFGKVINIGKK 546 The following BLAST results are available for this feature:
BLAST of CX671756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 178
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671756 ID=CX671756; Name=CX671756; organism=Citrus sinensis; type=EST; length=845bpback to top |