CX671756

Overview
NameCX671756
Unique NameCX671756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_RHYAM (Elongation factor 1-alpha (Fragment) OS=Rhynchosciara americana PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.427e-71
Identity = 129/193 (66.84%), Postives = 157/193 (81.35%), Query Frame = -3
Query:  265 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 843
            VYK         GR+ETG+LKPG VV F P+ +TTEVKSVEMHHEAL EA+PGDNVGFNVKNV+VK+L+RG+VA +SK +P + A NFT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRRSGK  E  PK +K+GDA +V + P+KP+ VE+F ++PPLGRFAVRDMRQTVAVGVIKSV  KD
Sbjct:  202 VYKIGGIGTVPVGRLETGILKPGTVVVFAPANITTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKELRRGYVAGDSKANPPKGAENFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKXKVDRRSGKSTEDNPKAIKSGDAAIVILQPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSVVFKD 394          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.682e-70
Identity = 131/197 (66.50%), Postives = 158/197 (80.20%), Query Frame = -3
Query:  262 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKE---PKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 843
            VYK         GRVETG++KPGMVVTF P+GL+TEVKSVEMHHE L EA PGDNVGFNVKNV+VK++KRG VA +SK+DP +E   F +QVI++NHPGQI  GY+PVLDCHT+HIA KF+E+V K+DRR+G  + KE      LKNGDA MV++ P++PM VE+F++YPPLGRFAVRDMRQTVAVGVIKS  KK P
Sbjct:  241 VYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAP 437          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_TETPY (Elongation factor 1-alpha OS=Tetrahymena pyriformis PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.869e-70
Identity = 129/193 (66.84%), Postives = 153/193 (79.27%), Query Frame = -3
Query:  265 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 843
            VYK         GRVETGV+KPGM + F P+ +  E KSVEMHHE L EA+PGDNVGFN+K V+VKD++RG VAS++K+DPA+EAA F SQVIIMNHPGQI  GY PVLDCHT+HIA KF  +  KIDRR+GK  E+ PKF+KNGDA +V +IPTK + VE F +YPPLGR+AVRDM+QTVAVGVIK VEKKD
Sbjct:  242 VYKIGGIGTVPVGRVETGVIKPGMSIQFAPNKVIAECKSVEMHHEQLPEAVPGDNVGFNIKGVSVKDIRRGNVASDAKNDPAKEAATFYSQVIIMNHPGQIQAGYTPVLDCHTAHIACKFETIHDKIDRRTGKSQEENPKFIKNGDAALVTLIPTKALCVEVFQEYPPLGRYAVRDMKQTVAVGVIKKVEKKD 434          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 9.230e-69
Identity = 124/192 (64.58%), Postives = 152/192 (79.17%), Query Frame = -3
Query:  268 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 843
            VYK         GRVETGVLK GMV+TF P G + E KSVEMHHE + EA PG+NVGFNVK ++VKD+KRGFVAS+SK+DPA +  +F S  I+MNHPG+I  GY PV+DCHT+HIA KF EL+TK D+RSGK  E+ PKFLK GDAG++++ P+KP+ VETF+ Y PLGRFAVRDMRQTVAVGVI+ ++KK
Sbjct:  241 VYKIGGIGTVPVGRVETGVLKAGMVITFAPKGCSAECKSVEMHHEEVPEAAPGNNVGFNVKGLSVKDIKRGFVASDSKNDPATDTESFVSHTIVMNHPGEIKAGYTPVIDCHTAHIACKFEELLTKADKRSGKMTEENPKFLKAGDAGLIRLSPSKPLCVETFATYAPLGRFAVRDMRQTVAVGVIQEIKKK 432          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_ENTHI (Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.581e-68
Identity = 122/190 (64.21%), Postives = 156/190 (82.11%), Query Frame = -3
Query:  277 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELE-KEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 843
            VYK         GRVETG+LKPG +V F PSG+++E KS+EMHH AL +A+PGDNVGFNV+N+ VKD+KRG VAS++K+ PA    +FT+QVI+MNHPGQI  GY PVLDCHTSHIA KF EL++KIDRR+GK +E  EP+++KNGD+ +VK++PTKP+ VE F+ +PPLGRFAVRDM+QTVAVGV+K+V
Sbjct:  239 VYKISGIGTVPVGRVETGILKPGTIVQFAPSGVSSECKSIEMHHTALAQAIPGDNVGFNVRNLTVKDIKRGNVASDAKNQPAVGCEDFTAQVIVMNHPGQIRKGYTPVLDCHTSHIACKFEELLSKIDRRTGKSMEGGEPEYIKNGDSALVKIVPTKPLCVEEFAKFPPLGRFAVRDMKQTVAVGVVKAV 428          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_PLAFK (Elongation factor 1-alpha OS=Plasmodium falciparum (isolate K1 / Thailand) GN=MEF-1 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 5.065e-67
Identity = 117/193 (60.62%), Postives = 157/193 (81.35%), Query Frame = -3
Query:  265 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 843
            VYK         GRVETG+LK GMV+ F PS + +E KSVEMH E L+EA PGDN+GFNVKNV+VK++KRG+VAS++K++PA+  + FT+QVII+NHPG+I NGY P+LDCHTSHI+ KF  + +KID+RSGK +E+ PK +K+GD+ +V + P KPMVVETF++YPPLGRFA+RDMRQT+AVG+I  +++K+
Sbjct:  239 VYKIGGIGTVPVGRVETGILKAGMVLNFAPSAVVSECKSVEMHKEVLEEARPGDNIGFNVKNVSVKEIKRGYVASDTKNEPAKGCSKFTAQVIILNHPGEIKNGYTPLLDCHTSHISCKFLNIDSKIDKRSGKVVEENPKAIKSGDSALVSLEPKKPMVVETFTEYPPLGRFAIRDMRQTIAVGIINQLKRKN 431          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.474e-66
Identity = 121/192 (63.02%), Postives = 148/192 (77.08%), Query Frame = -3
Query:  268 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 843
            VYK         G++ETG+LKPGM ++F PSG + EVKS+EMHHE LQ A PG N+GFNVKN+AVK LKRG VA NSK DP  EA++FT+QVII+NHPG I  GY+PV+DCHT+HI  +F+EL  KIDRR+GK+LE  P  LK+GDA ++ + P KP  VE F DYPPLGRFA RD++QTVAVGV+KSVE K
Sbjct:  256 VYKIGGIGTVPVGKIETGILKPGMTISFAPSGFSAEVKSIEMHHEPLQMAFPGFNIGFNVKNIAVKSLKRGNVAGNSKSDPPTEASSFTAQVIILNHPGFIKAGYSPVIDCHTAHITCQFAELQEKIDRRTGKKLEDNPGLLKSGDAAIITLKPIKPFCVERFFDYPPLGRFAARDLKQTVAVGVVKSVEHK 447          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_SPOFR (Elongation factor 1-alpha (Fragment) OS=Spodoptera frugiperda PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.086e-65
Identity = 113/175 (64.57%), Postives = 145/175 (82.86%), Query Frame = -3
Query:  319 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 843
            VYK         GRVETG+LKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  239 VYKIGGIGTVPVGRVETGILKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_HELZE (Elongation factor 1-alpha (Fragment) OS=Heliothis zea PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.086e-65
Identity = 113/175 (64.57%), Postives = 145/175 (82.86%), Query Frame = -3
Query:  319 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 843
            VYK         GRVETG+LKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  239 VYKIGGIGTVPVGRVETGILKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CX671756 vs. ExPASy Swiss-Prot
Match: EF1A_HELVI (Elongation factor 1-alpha (Fragment) OS=Heliothis virescens PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 8.086e-65
Identity = 113/175 (64.57%), Postives = 145/175 (82.86%), Query Frame = -3
Query:  319 VYKXXXXXXXXXGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 843
            VYK         GRVETG+LKPG +V F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  239 VYKIGGIGTVPVGRVETGILKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
The following BLAST results are available for this feature:
BLAST of CX671756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
EF1A_RHYAM4.427e-7166.84Elongation factor 1-alpha (Fragment) OS=Rhynchosci... [more]
EF1A_DICDI1.682e-7066.50Elongation factor 1-alpha OS=Dictyostelium discoid... [more]
EF1A_TETPY2.869e-7066.84Elongation factor 1-alpha OS=Tetrahymena pyriformi... [more]
EF1A1_EUPCR9.230e-6964.58Elongation factor 1-alpha 1 OS=Euplotes crassus GN... [more]
EF1A_ENTHI4.581e-6864.21Elongation factor 1-alpha OS=Entamoeba histolytica... [more]
EF1A_PLAFK5.065e-6760.62Elongation factor 1-alpha OS=Plasmodium falciparum... [more]
EF1A1_XENLA1.474e-6663.02Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A_SPOFR8.086e-6564.57Elongation factor 1-alpha (Fragment) OS=Spodoptera... [more]
EF1A_HELZE8.086e-6564.57Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]
EF1A_HELVI8.086e-6564.57Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_13A03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-13A03-A5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671756 ID=CX671756; Name=CX671756; organism=Citrus sinensis; type=EST; length=845bp
GACTAAATTTTCAAAATCGAGCACTAACGGCTAATCTTGAAACAAAATGT
TTGACATCCAAAAACTGGTTTATCAACTTACCAAAAAAAACTCAATGATA
TAAAACCAAATTCAGAGAATTAAAATGAAGTCTACCGTAAAACAAACTAA
AACATGACAAAAATAGCATAAACAGAGAAAATAAAAGCTAACTATAGCAG
ATAGATCCCAAAAAACTCCTCACTTCTTCTTGGCAGCAGACTTGGTGACC
TTGGCACCCGATGGATCCTTCTTTTCAACACTCTTGATCACACCAACAGC
TACAGTCTGACGCATGTCCCTAACAGCAAAACGACCAAGGGGTGGGTAGT
CGGAGAAGGTCTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCATT
CCGGCATCTCCATTCTTCAAGAACTTGGGCTCCTTCTCAAGCTCCTTGCC
AGATCGCCTGTCAATCTTGGTCACAAGCTCAGAAAACTTGACAGCAATGT
GGGAGGTGTGGCAGTCAAGCACTGGGGCATATCCATTTCCAATCTGGCCA
GGATGGTTCATGATGATGACCTGTGAAGTGAAGTTGGCAGCTTCCCTGGC
CGGATCATCCTTCGAGTTGGAAGCAACAAAACCACGCTTGAGATCCTTGA
CAGCAACGTTCTTCACGTTGAAGCCAACATTGTCACCCGGAAGGGCCTCC
TGCAGAGCTTCGTGGTGCATCTCAACAGACTTAACCTCAGTTGTCAATCC
AGAGGGACCAAATGTCACCACCATACCAGGCTTGAGCACACCGGTCTCAA
CGCGACCCACTGGGACGGGTCCAATGCCACCAATCTTGTACACGT
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