CX671749
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 80/212 (37.74%), Postives = 112/212 (52.83%), Query Frame = -3 Query: 282 TRSVSVSAAAADPNRPLWFPGST------PPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGILNTPSWYTAGEQEYFT---DTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFP------NNKLTGTDVGYPGGLWFDPL--------GWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQ 848 +R + V AAAA P + W P PEWLDGSLPGDFGFDPLGLG DP L+W ++E++H RWAML GIF+ + T + W+ AG TL +++ +GW E +RW D P + + P N + + GYPGG +FDPL G + +K++ L+ EIK+ RLAMLA++ +F+ Sbjct: 44 SRKLVVVAAAAAPKKS-WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGI------PWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIFYFE 248
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 85/210 (40.48%), Postives = 112/210 (53.33%), Query Frame = -3 Query: 192 FPGSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAAFTP 794 F G TP +L+G GD+G+D GL SDPET N + E++H RWAMLGA G PELL K G+ W+ AG Q + + +L + I WA ++ G V + TD YPGG FDPLG + P+ EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP +A +A +P Sbjct: 64 FSGETP-SYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVTDPIYPGGS-FDPLGL-ADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSP 265
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 80/201 (39.80%), Postives = 106/201 (52.74%), Query Frame = -3 Query: 195 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 776 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PEL + G+ W+ AG Q + + +L + I WA ++ G V + D YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVIDPLYPGGS-FDPLGL-ADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 260
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 83/219 (37.90%), Postives = 113/219 (51.60%), Query Frame = -3 Query: 225 AGTRSVSVSAAAADPNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 854 A + VS S+ +R L+ PP +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + + WA ++ G V I D YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GP+++L H+ADP Sbjct: 39 AKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWA-----CQVVLMGAVEGYRIAGGPLGEIVDPLYPGGS-FDPLGLAE-RPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADP 250
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.426e-31 Identity = 81/205 (39.51%), Postives = 106/205 (51.71%), Query Frame = -3 Query: 225 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 812 P+RP + P +L G PGD+G+D + +DPET N + E++HCRWAMLGA G PELL K G+ W+ AG Q + + L + I WA ++ G + + G D PGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL HLADP Sbjct: 53 PDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWA-----CQVVLMGLIEGYRVGGGTLGEGLDPLLPGGA-FDPLGL-ADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADP 250
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 78/191 (40.84%), Postives = 101/191 (52.88%), Query Frame = -3 Query: 225 PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 776 P +L G PGD+G+D GL +DPET N + E++HCRWAMLGA G PELL + G+ W+ AG Q + + +L + I WA ++ G V + D YPGG FDPLG PE EL+ K IKNGRLAM ++ G + Q I TG GP++NL HLADP Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA-----CQVVLMGAVEGYRVAGGPLGEVVDPLYPGGS-FDPLGLAE-DPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 251
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 80/205 (39.02%), Postives = 108/205 (52.68%), Query Frame = -3 Query: 225 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 812 P+RP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+ W+ AG Q + + L + I WA ++ G V + G D YPGG FDPLG + P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL H+ADP Sbjct: 50 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA-----VQVVLMGFVEGYRVGGGPLGEGLDKVYPGGA-FDPLGL-ADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 247
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.437e-30 Identity = 80/205 (39.02%), Postives = 108/205 (52.68%), Query Frame = -3 Query: 225 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 812 P+RP + P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PE+L+K G+ W+ AG Q + + L + I WA ++ G V + G D YPGG FDPLG + P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL H+ADP Sbjct: 50 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWA-----VQVVLMGFVEGYRVGGGPLGEGLDKVYPGGA-FDPLGL-ADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 247
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.452e-30 Identity = 80/215 (37.21%), Postives = 112/215 (52.09%), Query Frame = -3 Query: 195 PNRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 812 P+R L+ PP +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL + G+ W+ AG Q + + +L + I WA ++ G + + D YPGG FDPLG + PE +++ KE+KNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAIEGYRVAGGPLGEVVDPLYPGGT-FDPLGL-ADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 259
BLAST of CX671749 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.452e-30 Identity = 88/219 (40.18%), Postives = 114/219 (52.05%), Query Frame = -3 Query: 192 PNRPLWF-PGSTP-PEWLDGSLPGDFGFDPLGLGSDPETLRWNVQSEIVHCRWAMLGAAGIFIPELLTKLGI-LNTPSWYTAGEQEY------FTDTTTLFIVEMIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 812 P+RP + P S P +L G PGD+G+D GL +DPET N + E++H RWAMLGA G PELL K G+ W+ AG Q + + L + I WA ++ G V + G D YPGG FDPLG + P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI NL H+ADP +A FA F P Sbjct: 52 PDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWA-----TQVVLMGFVEGYRVGGGPLGEGLDPLYPGGA-FDPLGL-ADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVP 263 The following BLAST results are available for this feature:
BLAST of CX671749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671749 ID=CX671749; Name=CX671749; organism=Citrus sinensis; type=EST; length=898bpback to top |