CX671741

Overview
NameCX671741
Unique NameCX671741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671741_ssr96 microsatellite CX671741_ssr96:96..107. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5821 contig Csv1_Contig5821:85..927. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: Y219_RICPR (Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii GN=RP219 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.890e-35
Identity = 70/178 (39.33%), Postives = 109/178 (61.24%), Query Frame = 3
Query:  309 ITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTA 842
            ++ L NGL + T +     +  + +    G+R+E +E  G +HFLEHM FKGT+ RTA+ + EE +++GG+ NAYT  E T YYA+VL ++ + AL+ILADI+QNS F    I +E  +I++           +I++  + T ++  PLG++ILG  + + T TKEH  N+I  HY A
Sbjct:    7 VSKLKNGLTILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQQIAEEFDSIGGYFNAYTGHENTVYYARVLSENCHKALNILADIIQNSIFADEEIAKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKGQPLGKSILGTTKTLVTFTKEHFLNFIGKHYNA 184          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: Y293_RICCN (Uncharacterized zinc protease RC0293 OS=Rickettsia conorii GN=RC0293 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.522e-34
Identity = 69/178 (38.76%), Postives = 107/178 (60.11%), Query Frame = 3
Query:  309 ITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTA 842
            ++ L NGL + T +     +  + +    G+R+E  E +G +HFLEHM FKGT+ RTA+ + E  + +GGH NAYT  E T YYA+VL ++ + AL+ILADI+QNS F    I +E  VI++           ++++  +   ++  PLG++ILG A+ + T TKEH  N+I  +Y A
Sbjct:    7 VSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAKQIAEAFDAIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAKEYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFIDKYYNA 184          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: Y210_RICTY (Uncharacterized zinc protease RT0210 OS=Rickettsia typhi GN=RT0210 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.618e-34
Identity = 69/178 (38.76%), Postives = 109/178 (61.24%), Query Frame = 3
Query:  309 ITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTA 842
            I+ L NGL + T +     +  + +    G+R+E +E  G +HFLEHM FKGT+ RTA+ + EE +++GG+ NAYT  E T YY +VL ++ + AL+ILADI+QNS F    I++E  +I++           +I++  + T ++  PLG++ILG A+ +   T+EH  N+I  HY A
Sbjct:    7 ISKLKNGLTILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQQIAEEFDSIGGYFNAYTGYENTVYYVRVLSENCHKALNILADIIQNSIFADEEISKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEHFLNFIGKHYNA 184          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: Y522_RICBR (Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0522 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.582e-34
Identity = 68/178 (38.20%), Postives = 106/178 (59.55%), Query Frame = 3
Query:  309 ITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTA 842
            ++ L NGL + T +     +  + +    GSR+E     G AHFLEHM FKGT+ RTA+ + EE +++GGH NAYT  E+T YY++VL ++ N AL I+ADI+QNS F +  I +E  VIL+           ++++  + + F+  PLG+ ILG ++ I+T  ++H   +   HY A
Sbjct:    7 VSKLKNGLTILTYNMPYVNSVAINLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTRTAKQIAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSAFAEEEIAKEYQVILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNA 184          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: Y5738_STRCO (Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor GN=SCO5738 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.211e-33
Identity = 67/175 (38.29%), Postives = 100/175 (57.14%), Query Frame = 3
Query:  312 TTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHY 836
            TTLP GLR+ TE+  + ++AT G+W   GSR ET   NG  H+LEH++FKGT KR+A D+   I+ +GG +NA+T++E T YYA+VLD D+  A+D++ D+L  S   +  +  ER  IL             + D    T F    LGR +LG    +  +T + ++ +   HY
Sbjct:   38 TTLPGGLRIVTETLPSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKRSALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQEEDVDVERGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHY 212          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: Y855_MYCLE (Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae GN=ML0855 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.807e-32
Identity = 71/176 (40.34%), Postives = 103/176 (58.52%), Query Frame = 3
Query:  312 TTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 839
            TTLP GLRV TE   A ++A+VGVW+  GSR E     G AHFLEH++FK T  RTA D+ + I+ +GG LNA+T++E T YYA VLD D+  A+D++AD++ N       +  ERDV+L             + D   A  F   P+GR ++G  +++  +T+  L ++    YT
Sbjct:   25 TTLPGGLRVVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMDIAQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGRCAVDDVELERDVVLEEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYT 200          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: Y2805_MYCBO (Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis GN=Mb2805c PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.171e-31
Identity = 73/183 (39.89%), Postives = 106/183 (57.92%), Query Frame = 3
Query:  291 AAPETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 839
            AA   + TTLP GLRV TE   A  +A+VGVW+  GSR E     G AHFLEH++FK T  R+A D+ + ++ +GG LNA+T++E T YYA VL  D+  A+D++AD++ N       +  ERDV+L             + D   A  F   P+GR ++G AQ++  +T+  LQ++    YT
Sbjct:   11 AALAPRRTTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYT 193          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: Y2782_MYCTU (Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium tuberculosis GN=Rv2782c PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.171e-31
Identity = 73/183 (39.89%), Postives = 106/183 (57.92%), Query Frame = 3
Query:  291 AAPETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 839
            AA   + TTLP GLRV TE   A  +A+VGVW+  GSR E     G AHFLEH++FK T  R+A D+ + ++ +GG LNA+T++E T YYA VL  D+  A+D++AD++ N       +  ERDV+L             + D   A  F   P+GR ++G AQ++  +T+  LQ++    YT
Sbjct:   11 AALAPRRTTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYT 193          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: MPPA_NEUCR (Mitochondrial-processing peptidase subunit alpha OS=Neurospora crassa GN=mpp PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.617e-20
Identity = 53/176 (30.11%), Postives = 93/176 (52.84%), Query Frame = 3
Query:  309 ITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHY 836
            ITTL NG+RVA+E +L    + VGV+IDAGSR+E D   G +H ++ + FK T  RTA ++ E +E +GG++   +SRE   Y A   +K +  A++++A+ +++       +  +                 ++ + +H  AF+   LG  +L P + +  I ++ +Q Y    Y
Sbjct:   54 ITTLSNGVRVASE-DLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTADEMLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKLTDEELEGQIMTAQYEVNEIWSKAELILPELVHMAAFKDNTLGNPLLCPKERLDYINRDVIQTYRDAFY 228          
BLAST of CX671741 vs. ExPASy Swiss-Prot
Match: MPPA_MOUSE (Mitochondrial-processing peptidase subunit alpha OS=Mus musculus GN=Pmpca PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.105e-19
Identity = 59/183 (32.24%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  300 ETKITTLPNGLRVATESNLAAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRTARD-LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNS--TFDQARITRERDVILRXXXXXXXXXXXVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYT 839
            ETK+TTL NGLRVA++ N   +  TVG+ I++GSR+E    +G AHFLE + F  T +  ++D +   +E  GG  +  TSR+ T Y      K ++  +D+LAD++ +   T ++  +TR                  ++ + +H  AF+   +G     P +NI  I +E L +Y+  +YT
Sbjct:   65 ETKVTTLDNGLRVASQ-NKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSYLKNYYT 246          
The following BLAST results are available for this feature:
BLAST of CX671741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
Y219_RICPR3.890e-3539.33Uncharacterized zinc protease RP219 OS=Rickettsia ... [more]
Y293_RICCN2.522e-3438.76Uncharacterized zinc protease RC0293 OS=Rickettsia... [more]
Y210_RICTY5.618e-3438.76Uncharacterized zinc protease RT0210 OS=Rickettsia... [more]
Y522_RICBR9.582e-3438.20Uncharacterized zinc protease RBE_0522 OS=Ricketts... [more]
Y5738_STRCO6.211e-3338.29Uncharacterized zinc protease SCO5738 OS=Streptomy... [more]
Y855_MYCLE1.807e-3240.34Uncharacterized zinc protease ML0855 OS=Mycobacter... [more]
Y2805_MYCBO1.171e-3139.89Uncharacterized zinc protease Mb2805c OS=Mycobacte... [more]
Y2782_MYCTU1.171e-3139.89Uncharacterized zinc protease Rv2782c/MT2852 OS=My... [more]
MPPA_NEUCR4.617e-2030.11Mitochondrial-processing peptidase subunit alpha O... [more]
MPPA_MOUSE5.105e-1932.24Mitochondrial-processing peptidase subunit alpha O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12H04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12H04-P8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671741 ID=CX671741; Name=CX671741; organism=Citrus sinensis; type=EST; length=843bp
ATCAGTGAGTCCAAACGATGGCGTTTAAGCATCTCCTAACCCTAGCTCGC
CGGTCTCACAGGCCTTCGTCCACGGCCCTCTTTACCGCCATCCGATCCTC
CTCCTCCGCCTCACCCCTCGCCACGTCACCATCGTCTCCGCCGCCGTCCC
CGCCTCCCCCAAATGTCATGATCTACGACCGTCTCGCCGAAGCCGTCAAA
GCCAAGCTCAAAAACCTAGAAAACCCCGACCCGAAGTTCTTAAAGTACGG
ATCCCCGCACCCAACCCTTACTTCCCACACGCACATCCTCGCCGCGCCGG
AGACCAAAATCACGACTTTGCCTAACGGACTCCGCGTCGCCACCGAGTCG
AACCTCGCCGCGAAGACGGCCACAGTTGGAGTTTGGATTGACGCCGGCTC
GAGGTTCGAGACTGATGAGACGAACGGGACGGCTCATTTCTTGGAGCATA
TGATATTCAAGGGGACGGAGAAGCGGACTGCGAGAGATTTGGAGGAGGAG
ATCGAGAATATGGGGGGGCATTTGAATGCTTACACTAGCAGGGAACAGAC
GACCTATTATGCCAAGGTGTTGGATAAGGATGTGAATAATGCTTTGGATA
TTTTGGCAGATATTTTGCAGAACTCGACGTTTGATCAAGCGAGGATCACC
AGGGAACGGGATGTTATTTTGAGAGAAATGGAGGAGGTTGAGGGGCAAAC
AGAGGAAGTCATTTTTGATCATTTGCATGCAACTGCATTCCAGTACACTC
CTTTGGGGAGAACTATTCTCGGTCCTGCTCAGAATATCAAGACAATCACA
AAAGAACATCTGCAGAACTATATTCACACTCACTATACTGCTC
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