CX671713

Overview
NameCX671713
Unique NameCX671713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2797 contig Csv1_Contig2797:289..1176. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.404e-24
Identity = 53/150 (35.33%), Postives = 95/150 (63.33%), Query Frame = -3
Query:  416 SNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQN 865
            S+ +  ++ D + F+ L  +G T+  +A+++ GR++P ++LE +   F+  YG   A  APA  +N EF   L + M++   +P  +  L +V+ +VSE++ VM+ENIEK+++RG++IELLVDKT  +   +  FR    ++RR +W++N
Sbjct:   41 SDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKN 188          
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.850e-22
Identity = 61/189 (32.28%), Postives = 99/189 (52.38%), Query Frame = -3
Query:  326 LQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGF---NCGK 883
            L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R    +FL  VK  F + YG  +A TA    +N EF   L   +++  ++ + + K+ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F++T   + R M ++N+                    +C GF   NC K
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-KSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNIKLTIIIIIVSIVFIYIIVSLLCGGFTWPNCVK 219          
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.156e-22
Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = -3
Query:  413 LQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEE--ISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNM 883
            L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R     FL  +K  F + YG  +A TA    +N EF   L   ++Y   H E     ++A+ +AQV E+KG+M+ NI+ V  RGEK+ELL+DKTENL   +  F++T   + R M ++N+
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKY---HSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187          
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.384e-22
Identity = 60/189 (31.75%), Postives = 98/189 (51.85%), Query Frame = -3
Query:  326 LQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGF---NCGK 883
            L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R     FL  +K  F + YG  +A TA    +N EF   L   +++  ++ + + K+ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F++T   + R M ++N+                    +C GF   NC K
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIIIIISVVFIYIIVSPLCGGFTWPNCVK 219          
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.032e-22
Identity = 54/157 (34.39%), Postives = 91/157 (57.96%), Query Frame = -3
Query:  413 LQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNM 883
            L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R     FL  VK  F + YG  +A TA    +N EF   L   +++  ++ + + ++ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F++T   + R M ++N+
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-QSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNV 187          
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21
Identity = 54/157 (34.39%), Postives = 91/157 (57.96%), Query Frame = -3
Query:  413 LQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNM 883
            L K+P+ NNK TY+   + F+Y+  +   Y  + D+   R     FL  +K  F + YG  +A TA    +N EF   L   +++  ++ + + K+ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F++T   + R M ++N+
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187          
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.046e-21
Identity = 57/182 (31.32%), Postives = 95/182 (52.20%), Query Frame = -3
Query:  341 LQKLPASNNKF-TYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHG 883
            L+K+P + +   +Y+ D + F+    +G T   +ADE +GR+IP +FLE +   FV  YG     +A A  +N EF   L + ++Y  + P     ++++K ++++V+ VM+ENI+ +LDRGE++ELLVDKT N+      FR    +    +W +N                      CHG
Sbjct:   33 LEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRA-IHSAQAYAMNDEFSRVLNQQIEYYSNDPNA-DTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLILVLLVIIYIGVAFACHG 212          
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21
Identity = 54/157 (34.39%), Postives = 90/157 (57.32%), Query Frame = -3
Query:  413 LQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNM 883
            L K+P+ NNK TY    + F+Y+  +   Y  + D+   R     FL  +K  F + YG  +A TA    +N EF   L   +++  ++ + + K+ + +AQV E+KG+M+ NI+ V  RGE++ELL+DKTENL   +  F++T   + R M ++N+
Sbjct:   33 LAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGS-RAQTALPYAMNSEFSSVLAAQLKHHSEN-KGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNL 187          
BLAST of CX671713 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20
Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = -3
Query:  416 LQKLPASNNKFTYNCDAHTFNYLVDNGYTYCVVADESSGRQIPMAFLERVKDEFVSKYGGGKAATAPANGLNKEFGPKLKELMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQN 883
            + K+P ++ K  Y  + H F+Y+ +N   +  +  E  G QIP  FL  ++ +F+  YG   +  +P    +  F   L+E M+Y   +P+  +K+  V  QVSE KG + + IEK + RGEKIE++VDKTE L  ++  F+S    ++RK+W QN
Sbjct:   36 ITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSFSQNSPTATYDP-FIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEKTIHRGEKIEIIVDKTERLQSESFVFKSNSVALKRKLWWQN 187          
The following BLAST results are available for this feature:
BLAST of CX671713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
VA714_ARATH4.404e-2435.33Vesicle-associated membrane protein 714 OS=Arabido... [more]
VAMP7_MOUSE1.850e-2232.28Vesicle-associated membrane protein 7 OS=Mus muscu... [more]
VAMP7_CHICK3.156e-2236.48Vesicle-associated membrane protein 7 OS=Gallus ga... [more]
VAMP7_BOVIN5.384e-2231.75Vesicle-associated membrane protein 7 OS=Bos tauru... [more]
VAMP7_RAT7.032e-2234.39Vesicle-associated membrane protein 7 OS=Rattus no... [more]
VAMP7_HUMAN1.199e-2134.39Vesicle-associated membrane protein 7 OS=Homo sapi... [more]
VA712_ARATH2.046e-2131.32Vesicle-associated membrane protein 712 OS=Arabido... [more]
VAMP7_PONAB2.672e-2134.39Vesicle-associated membrane protein 7 OS=Pongo abe... [more]
VAM7A_DICDI2.954e-2035.26Vesicle-associated membrane protein 7A OS=Dictyost... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12G01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12G01-N2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671713 ID=CX671713; Name=CX671713; organism=Citrus sinensis; type=EST; length=888bp
TTTTTTTTTTTTTTTTACTGGGAAAGTTAAGCTACTTCCACACAAATTCA
GCAAATTCGAAGCTAGCTAAGAAGGCCTATTTTAGTTCTGGCCGGTATAA
TCAGCAGCAGCATCTTTGCACAAGCATTCTCACAATATAATGACGGGTCT
CATTCACAAGCAAAAATAAGTTTTCGGTCTGCTTTGTAACAAATATAGGG
AAACTGCTAACTTTTTTAGACTAAATACAAAGTCCAGATCATATATATTT
ATATATCTCTTTCACAATATCATCACAGAAGCTCTTAGAAGAGCATAATA
TAAGCCTCCTGGAGAATAGCACTCATTTTCCGCAGTTGAAACCATGGCAA
ACAGAGAGGACTATGATGAGGATCAAGGCAATCAGTATTCCCAAAACAAT
CAGCTTGATCTTCATATTTTGCAGCCACATTTTCCTCCGCATTTTGGTCC
CCGTACTCCGAAAGTCTTGTGCCTGCTGATGAAGGTTCTCAGTCTTATCG
ACCAGCAGCTCAATCTTTTCCCCCCTATCTAAAACCTTTTCAATATTCTC
CATCATAACACCTTTGACTTCTGAAACCTGAGCCTTAACCTTCGCAAGCT
TGCTGATCTCCTCAGGATGATCAACACAGTACTGCATAAGTTCTTTCAAT
TTTGGTCCAAATTCCTTGTTCAGGCCATTGGCAGGAGCCGTGGCAGCCTT
TCCACCCCCATATTTGGAAACAAATTCATCCTTGACGCGCTCCAGAAAAG
CCATTGGTATTTGTCTTCCGGACGATTCATCTGCGACCACACAATATGTG
TAACCATTATCGACGAGATAATTGAAGGTGTGAGCATCACAGTTGTAGGT
GAACTTGTTGTTGGAAGCAGGGAGTTTCTGGAGGCACT
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