CX671709

Overview
NameCX671709
Unique NameCX671709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length966
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_BUCAP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.836e-16
Identity = 69/234 (29.49%), Postives = 118/234 (50.43%), Query Frame = -3
Query:  125 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVPT-SSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 805
            +P K RLYSI+SS   +  D   +++ V   V    +G I  G  S++L   LK    VKI         +P + +  +IM+ +GTGIAPFR F+     ++ ++ K  G  W+F G P  +   LY+ E++K  +K     ++  A SR+QK    EK+Y+Q ++ E   ELWE + +    +Y+CG      + +EK + D+     + D  +  ++   L+   ++  +VY
Sbjct:  384 RPLKPRLYSISSSQ-SEMNDEVHITVGV---VKKQISGTIHLGGSSSYLSQFLKIDDSVKIFVEEKSNFRLPENKDVPIIMIGSGTGIAPFRAFI-----QQRDNDKATGKNWIFFGNPNFTEDFLYQLEWQKYLKKKLLT-KMSLAWSRDQK----EKIYVQDKIRENGKELWEWVNQ-GAQIYVCGNASKMAKDVEKELLDVFSKNGSMDIEESSEFLNNLRITRRYQRDVY 602          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_SALTI (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Salmonella typhi GN=cysJ PE=3 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 5.010e-16
Identity = 69/234 (29.49%), Postives = 115/234 (49.15%), Query Frame = -3
Query:  125 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 805
            +P   RLYSIAS A  +      +++ V R    +  G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+ +   +  E     G  WLF G P  +   LY+ E+++  ++   + R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG        +EK + +++      D     +Y  +L+   ++  +VY
Sbjct:  381 RPLTPRLYSIAS-AQAEVESEVHITVGVVRY---DIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFMQQRAADGAE-----GKNWLFFGNPHFTEDFLYQVEWQRYVKEGLLS-RIDLAWSRDQK----EKIYVQDKLREQGAELWRWI-NDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY 599          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.546e-16
Identity = 65/234 (27.78%), Postives = 117/234 (50.00%), Query Frame = -3
Query:  125 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 805
            +P   RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  400 RPLTPRLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 618          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPP (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis (strain Pestoides F) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.546e-16
Identity = 65/234 (27.78%), Postives = 117/234 (50.00%), Query Frame = -3
Query:  125 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 805
            +P   RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  394 RPLTPRLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPN (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.546e-16
Identity = 65/234 (27.78%), Postives = 117/234 (50.00%), Query Frame = -3
Query:  125 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 805
            +P   RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  394 RPLTPRLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPE (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.546e-16
Identity = 65/234 (27.78%), Postives = 117/234 (50.00%), Query Frame = -3
Query:  125 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 805
            +P   RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  388 RPLTPRLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 606          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_YERPA (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.546e-16
Identity = 65/234 (27.78%), Postives = 117/234 (50.00%), Query Frame = -3
Query:  125 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 805
            +P   RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  388 RPLTPRLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 606          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_YERP3 (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.546e-16
Identity = 65/234 (27.78%), Postives = 117/234 (50.00%), Query Frame = -3
Query:  125 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-----LRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKAEQWNVEVY 805
            +P   RLYSIASS      +++        +V  + +G    G  S +L D L+   ++++         +P +P   VIM+  GTGIAPFR F+     ++ E    +G  WLF G P  +   LY+ E+++  ++     R+D A SR+Q      K+Y+Q ++ E   ELW  +++   ++Y+CG      + +E+ + D++    A D     +Y  +L++A ++  +VY
Sbjct:  394 RPLTPRLYSIASSQ----AETENEVHITVGVVRYDIDGRARSGGASGYLADRLEVDGDIRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQREVDGASGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQ----AHKIYVQDKLREQGAELWNWIQQ-GAHIYVCGDANRMAKDVEQVLLDVVALHGAMDAEQADEYLSELRQARRYQRDVY 612          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_SHISS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella sonnei (strain Ss046) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.116e-15
Identity = 66/209 (31.58%), Postives = 106/209 (50.72%), Query Frame = -3
Query:  188 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-LRGMEKGIDDIMVSLAANDG 805
            +P   RLYSIASS   +  +   V++ V R    +  G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+     ++    +  G  WLF G P  +   LY+ E+++  ++     R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG    M K ++  ++ + A  G
Sbjct:  381 RPLTPRLYSIASSQ-AEVENEVHVTVGVVRY---DVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPQTPVIMIGPGTGIAPFRAFM-----QQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQK----EKVYVQDKLREQGAELWRWI-NDGAHIYVCGDANRMAKDVEQALLEVIAEFG 574          
BLAST of CX671709 vs. ExPASy Swiss-Prot
Match: CYSJ_SHIDS (Sulfite reductase [NADPH] flavoprotein alpha-component OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=cysJ PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.116e-15
Identity = 66/209 (31.58%), Postives = 106/209 (50.72%), Query Frame = -3
Query:  188 KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCD-LKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKHEDYKFNGLAWLFLGVP-TSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCG-LRGMEKGIDDIMVSLAANDG 805
            +P   RLYSIASS   +  +   V++ V R    +  G    G  S+FL D ++   EV++         +P +P   VIM+  GTGIAPFR F+     ++    +  G  WLF G P  +   LY+ E+++  ++     R+D A SR+QK    EK+Y+Q ++ E   ELW  +  D  ++Y+CG    M K ++  ++ + A  G
Sbjct:  381 RPLTPRLYSIASSQ-AEVENEVHVTVGVVRY---DVEGRTRAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFM-----QQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLT-RIDLAWSRDQK----EKVYVQDKLREQGAELWRWI-NDGAHIYVCGDANRMAKDVEQALLEVIAEFG 574          
The following BLAST results are available for this feature:
BLAST of CX671709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
CYSJ_BUCAP3.836e-1629.49Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SALTI5.010e-1629.49Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPS8.546e-1627.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPP8.546e-1627.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPN8.546e-1627.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPE8.546e-1627.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERPA8.546e-1627.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_YERP38.546e-1627.78Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHISS1.116e-1531.58Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]
CYSJ_SHIDS1.116e-1531.58Sulfite reductase [NADPH] flavoprotein alpha-compo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F11-L22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671709 ID=CX671709; Name=CX671709; organism=Citrus sinensis; type=EST; length=966bp
TTTTTTGAAAGAAAATTTGAAAATAGTCTACCTATCTACACAGTGCAGAG
GGAAATATCATACAATGGGACAAAAAGGAAAAAAAATGAAAATGTGAGGG
ATGTTTTGTACATGTAAAGCATTAGTAGACTTCAACATTCCATTGCTCAG
CTTTCTTCAATTGCTTTTTGTAGTCCAGCCAATCAATGCCATCGTTAGCG
GCCAATGACACCATAATGTCATCGATTCCCTTCTCCATGCCTCTCAACCC
ACACATGTACACATAAGTGTTATCTTTCTTGAGTAATTCCCACAGCTCAT
TTGCATATTCAGCCATTCGGGTTTGAATGTACATCTTCTCACCCTTCTCA
TTCTTTTGTTCTCTGCTCACTGCAAAGTCAAGCCTGAAGTTTTCCGGGGC
CTTCTCCTTCATCTTCTCAAACTCCTCCTTGTAGAGTAGGGAACTGCTAG
TCGGGACACCCAAGAAGAGCCAAGCCAAACCATTGAACTTGTAGTCTTCG
TGCTTCTCAAAGAACATTTTCCACAAAAATCCACGGAATGGAGCGATTCC
AGTTCCAGTTGCAAGCATGATGACTGTAGCATTGGGATCCCTTGGCATGA
GCATTTCTTTCCCAACAGGTCCTGTAATTTTCACTTCAGCCCCAGGCTTC
AAGTCACACAAGAAATTTGAGCAGACTCCCTTAACAATTTCTCCATTTTC
GTTGGTGTACACAAGCCTTTTCACACATAAAGAAACAGTTTTGGAGTCTC
CAAAGTCACCAAGGGCACTGCTAGCAATGGAGTATAATCTCAGTTTGTGA
GGCTTCGCATTCTTGTCAACACCATCTGCAATCACCCCAATTGATTGCCC
TTCTTTGTAGGGAACCTCTCCTTCAGTGCTGAAGACCATGTGCCAGGTCT
CTCCAGGAGCATCATCACCAGTGATCTTAGTGTTTAAAGGCATCTGCCAA
TGTAAGGTGTCTTAAG
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