CX671708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HDA12_DICDI (Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 3.978e-79 Identity = 134/205 (65.37%), Postives = 168/205 (81.95%), Query Frame = 1 Query: 172 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF-GDYFPGTGDI 783 K +VCYF+D +VGNY+YG HPMKPHR+ +T+ L+ +YGL + M + K PA D+ +FH++DYV FL +TPE ++ + +KRF++GEDCPVF GL+ +C Y+GGS+ GA+KLNH + DIAINW+GGLHHA+K EASGFCYVNDIVLAILELLK H RVLY+DID+HHGDGV+EAFY TDRVMTVSFHKF GD+FPGTGDI Sbjct: 12 KTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLKFHSEDYVDFLERVTPENI-NEWKDVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFGGDFFPGTGDI 215
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HDA2_CAEEL (Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.160e-70 Identity = 126/216 (58.33%), Postives = 161/216 (74.54%), Query Frame = 1 Query: 151 PSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPE---TQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRD 789 P G D KR V Y+Y +VG+++YGQ HPMKP R+ + + L+ Y + + M V++ D+ FH +DYV+FL+++TP+ T D + L++FN+GEDCP+F GL+ +C YAGGSV GA +LNH + DI INW GGLHHAKK EASGFCYVNDIVL ILELLK H+RVLY+DIDIHHGDGV+EAF +DRVMTVSFH+FG YFPG+G I D Sbjct: 21 PDGADVKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVFHTEDYVNFLQTVTPKLGLTMPDDV--LRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRFGQYFPGSGSIMD 234
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: PHD1_SCHPO (Histone deacetylase phd1 OS=Schizosaccharomyces pombe GN=phd1 PE=1 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.917e-65 Identity = 115/204 (56.37%), Postives = 150/204 (73.53%), Query Frame = 1 Query: 172 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF-GDYFPGTGD 780 K++V Y D +VGNY+YG HPMKPHRI +T+ L+ YGL M V P A ++ FH +DY+ FL+ +TP+ + + ++FN+G+DCPVFDG + F Q AG S+ + KL G DIAINW+GGLHHAK+ EASGFCYVNDIVLAIL +L+ RVLY+DIDIHHGDGV++AFY +DRV+TVSFHK+ GD+FP TG+ Sbjct: 25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEFHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFPATGN 228
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HDA7_ARATH (Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.984e-62 Identity = 124/220 (56.36%), Postives = 151/220 (68.64%), Query Frame = 1 Query: 148 LPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ----LRQLKRFNVGEDC--PVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRD 789 + S DG KR+V YFY+P +G+YYYG P KP RIR+TH L+ Y L ++M++ P A D +FH+ +Y++FL+S+TPET D LKRFNV D PVF LF +C+ YAGGS+ A KLN DIAINWAGG+HH KK +ASGF YVND+VLAILELLK +RVLY++I HGD VEEAF TDRVMTVSFHK GD TGDI D Sbjct: 1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISD 216
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HOS2_YEAST (Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae GN=HOS2 PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.422e-60 Identity = 107/206 (51.94%), Postives = 148/206 (71.84%), Query Frame = 1 Query: 178 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR-QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF-GDYFPGTGDIRD 789 +V Y ++ +V +Y+YG HPMKP R+ +T L++ YGL + M + + A +L +FH++DYV+FL ++PE R L+ FN+G+DCP+F L+ + Y G S+ KL + DIAINW+GGLHHAKK SGFCYVNDIVL+IL LL+ H R+LY+DID+HHGDGV+EAFYTTDRV T+SFHK+ G++FPGTGD+ + Sbjct: 27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTE 232
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HDAC8_DANRE (Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.474e-49 Identity = 102/207 (49.28%), Postives = 131/207 (63.29%), Query Frame = 1 Query: 175 RKVCYFYDPEVGNYYYGQGHPMK-PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRD 789 R V Y Y PE Y K P+R M H+L+ YGLL+ M+V+KP A ++ FH D Y+ L I+ + D Q F +G DCPV +G+F + G ++ A L G CD+AINWAGG HHAKK EASG CYVND VL IL+L ++++RVLYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D Sbjct: 15 RSVVYVYSPE---YIQTCDSLSKVPNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDD-PQSADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTD 217
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HDAC8_XENTR (Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.603e-46 Identity = 89/183 (48.63%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 244 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRD 789 P R M H+L+ YGLL+ M+V+KP A ++ FH D Y+ L ++ E D L+ + +G DCP+ +G++ + G ++ A +L G IAINW GG HHAKK EASGFCY+ND VL IL+L ++ +RVLYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D Sbjct: 27 PRRASMVHSLIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDNDDPETLE-YGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSD 208
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HDAC8_HUMAN (Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 4.439e-46 Identity = 86/183 (46.99%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 244 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRD 789 P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C +AINW+GG HHAKK EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSD 216
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HDAC8_RAT (Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.798e-46 Identity = 86/183 (46.99%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 244 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRD 789 P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E +D ++ + +G DCP +G+F + GG++ A L G C +AINW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSD 216
BLAST of CX671708 vs. ExPASy Swiss-Prot
Match: HDAC8_MOUSE (Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 5.798e-46 Identity = 86/183 (46.99%), Postives = 121/183 (66.12%), Query Frame = 1 Query: 244 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRD 789 P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E +D ++ + +G DCP +G+F + GG++ A L G C +AINW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSD 216 The following BLAST results are available for this feature:
BLAST of CX671708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671708 ID=CX671708; Name=CX671708; organism=Citrus sinensis; type=EST; length=790bpback to top |