CX671704

Overview
NameCX671704
Unique NameCX671704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB9 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS195) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 2
Query:   62 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            E++   EA NA    +NF D D + VP ++ E+  P+++ ME + GI ++ I +L   G + K L    VE +  Q+    FFHAD HPGNI +  D       I  D G+MG++S   +  L E F   + +D  ++ Q  ++ G
Sbjct:  202 ELNLKLEALNAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB8 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS185) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 2
Query:   62 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            E++   EA NA    +NF D D + VP ++ E+  P+++ ME + GI ++ I +L   G + K L    VE +  Q+    FFHAD HPGNI +  D       I  D G+MG++S   +  L E F   + +D  ++ Q  ++ G
Sbjct:  202 ELNLKLEALNAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB5 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 2
Query:   62 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            E++   EA NA    +NF D D + VP ++ E+  P+++ ME + GI ++ I +L   G + K L    VE +  Q+    FFHAD HPGNI +  D       I  D G+MG++S   +  L E F   + +D  ++ Q  ++ G
Sbjct:  202 ELNLKLEALNAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB2 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS223) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 2
Query:   62 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            E++   EA NA    +NF D D + VP ++ E+  P+++ ME + GI ++ I +L   G + K L    VE +  Q+    FFHAD HPGNI +  D       I  D G+MG++S   +  L E F   + +D  ++ Q  ++ G
Sbjct:  202 ELNLKLEALNAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_ENT38 (Probable ubiquinone biosynthesis protein ubiB OS=Enterobacter sp. (strain 638) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17
Identity = 50/170 (29.41%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +   + +  E    L  E++  +E+ANA     NF++   + VP ++ +Y +  ++ ME + GI ++ I +L+  G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPMEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYVPEVYSDYCSQNMMVMERIYGIPVSDIVALENQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_CITK8 (Probable ubiquinone biosynthesis protein ubiB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + VP ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYVPEVYSDYCSQDMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_ACTP2 (Probable ubiquinone biosynthesis protein ubiB OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.842e-17
Identity = 49/164 (29.88%), Postives = 84/164 (51.22%), Query Frame = 2
Query:   38 ECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTA 523
            E    L  E+D T+E ANA    +NF++ + + VP ++ ++    ++ ME + GI ++ +++L   G D K L    V+ +  Q+    FFHAD H GNI V  +     + I  D G++G+++ N +  L E+F   + +D  +V    V+ G   P  D  A
Sbjct:  198 EYEKTLLDELDLTREMANAIRLRNNFENSEMLYVPEMYQDFCHKNVIVMERIYGIPVSDVETLKANGTDMKLLAERGVQVFFTQVFRDSFFHADMHAGNIFVNPNHPENPQYIGIDCGIVGTLNQNDKRYLAESFVAFFNRDYRRVALMHVESGWTPPDTDIDA 361          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: ADCK5_MOUSE (Uncharacterized aarF domain-containing protein kinase 5 OS=Mus musculus GN=Adck5 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.842e-17
Identity = 42/158 (26.58%), Postives = 80/158 (50.63%), Query Frame = 2
Query:   29 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGV 496
            +  +    L QE+D+  E  NAE  A   K   YV +P + W+ ++ ++LT ++  G K+N ++ +   G+  + + +  ++++ EQI   GF H+DPHPGN+ V     G+  L+  D G+   +    R  L + +  +  +D   + +    +GV
Sbjct:  264 VLQDLKGTLVQELDFENEGRNAERCAQELKHFHYVVIPRVHWDRSSKRVLTADFCNGCKVNDMEGIKSQGLAVQDVAKKLIQTFAEQIFHTGFIHSDPHPGNVLVRKGPDGKAELVLLDHGLYQFLDEKDRSSLCQLWRAIILRDNAAMKKHAAALGV 421          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBFM (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio fischeri (strain MJ11) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16
Identity = 47/159 (29.56%), Postives = 81/159 (50.94%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            V + +E    L  E+D  +EA+NA     NF+  + + VP +  + ++  ++  E + GI+++ I+ L++ G + K L    V  +  Q+    FFHAD HPGN+ V  D+    + I  D G++G+++   +  L E   G +  D  KV Q  V  G
Sbjct:  189 VEVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVILDLSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQLHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SODGM (Probable ubiquinone biosynthesis protein ubiB OS=Sodalis glossinidius (strain morsitans) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16
Identity = 49/170 (28.82%), Postives = 84/170 (49.41%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +   V +  E    L  E++  +EAANA     NF     + +P ++ +Y +  ++ ME + G+ +N + +L++ G + K L    V+ +  Q+    FFH D HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  181 DGRRLRPVEVVLEYEKTLLDELNLLREAANAIQLRRNFDGSPMLYIPEVYPDYCSETMMVMERIYGVPVNDVAALEKQGTNMKLLAERGVQVFFTQVFRDSFFHGDMHPGNIFVSFEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 350          
The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
UBIB_SHEB97.536e-1732.88Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHEB87.536e-1732.88Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHEB57.536e-1732.88Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHEB27.536e-1732.88Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_ENT387.536e-1729.41Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_CITK87.536e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=C... [more]
UBIB_ACTP29.842e-1729.88Probable ubiquinone biosynthesis protein ubiB OS=A... [more]
ADCK5_MOUSE9.842e-1726.58Uncharacterized aarF domain-containing protein kin... [more]
UBIB_VIBFM1.285e-1629.56Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_SODGM1.285e-1628.82Probable ubiquinone biosynthesis protein ubiB OS=S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F07-L14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bp
AGATGGTGCAAAGAGAGATTGGGTTGCCATATATGATGAATGTGCTAGTG
TGTTATATCAGGAAATTGATTACACCCAGGAAGCTGCTAATGCTGAACTT
TTTGCTAGTAATTTCAAAGACATGGATTACGTAAAAGTCCCAACGATATT
TTGGGAATACACCACACCACAGATTTTGACCATGGAGTATGTGCCGGGGA
TCAAAATAAACAGGATACAATCTTTAGATGAATTGGGTGTTGATCGAAAA
AGGTTGGGTCGATATGCGGTTGAATCTTACTTGGAACAAATTCTTTCACA
TGGTTTTTTTCATGCTGACCCTCATCCTGGAAATATCGCTGTAGATGATG
TAAATGGTGGAAGATTGATCTTCTATGATTTTGGTATGATGGGAAGTATT
AGTCCAAACATTAGAGAAGGTCTGCTTGAAACATTTTACGGAGTTTACGA
GAAGGATGCAGACAAGGTCCTTCAGGCAATGGTTCAAATGGGTGTTCTTG
TCCCTACTGGAGATACAACAGCTGTCAGGCGAACAGCACAGTTCTTCCTT
AACAGTTTTGAAGAGCGTCTTGCTGCACAAAGAAAAGAAAGAGAAATAAC
GACCCAAGAACTTGGCTTTAAAAAGCCATTGAGCAAGGAGGAAAAGATTG
AGAAAAAGAAGCAACGCCTTGCTGCAATAGGGGAAGATTTATTGGCCATT
GCAGCTGATCAACCTTTCCGATTTCCAGCAACATTCACATTTGTTGTCAG
AGCATTTTCAGTTTTAGATGGCATTGGGAAGGGCCTTGATCCTCGGTTTG
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