CX671704

Overview
NameCX671704
Unique NameCX671704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP7 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + VP ++ +Y +  ++ ME + GI ++ +++L+  G + + L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPQEVVREYEKTLLDELNLLRESANAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP3 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae (strain 342) GN=ubiB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + VP ++ +Y +  ++ ME + GI ++ +++L+  G + + L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPQEVVREYEKTLLDELNLLRESANAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y2090_ARATH (Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana GN=At2g40090 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/174 (27.59%), Postives = 86/174 (49.43%), Query Frame = 2
Query:   17 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDM-----DYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV-DDVNGGR---------LIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            D+  + DE +  L +E+D+  EA N E    NF+ +     +YV  PTI+W  +T ++LTME++ G ++N +  + +LG+    + +   +++ E +  HGF H DPH  N+ V  D +G R         L+  D G+   +  N R      +  +   DA  + +   ++G
Sbjct:  219 DYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRKLSPHIAEYVYAPTIYWNLSTSKLLTMEFMDGAQVNDVDKIRKLGIQPYEVSKLVSQTFAEMMFKHGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVILDHGLYKELDFNTRFNYASLWKALVFSDAKAIKEHSEKLG 392          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPS (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pseudotuberculosis GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPP (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis (strain Pestoides F) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPN (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPG (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPE (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPB (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPA (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
UBIB_KLEP71.285e-1628.82Probable ubiquinone biosynthesis protein ubiB OS=K... [more]
UBIB_KLEP31.285e-1628.82Probable ubiquinone biosynthesis protein ubiB OS=K... [more]
Y2090_ARATH1.679e-1627.59Putative ABC1 protein At2g40090 OS=Arabidopsis tha... [more]
UBIB_YERPS1.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]
UBIB_YERPP1.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]
UBIB_YERPN1.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]
UBIB_YERPG1.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]
UBIB_YERPE1.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]
UBIB_YERPB1.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]
UBIB_YERPA1.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F07-L14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bp
AGATGGTGCAAAGAGAGATTGGGTTGCCATATATGATGAATGTGCTAGTG
TGTTATATCAGGAAATTGATTACACCCAGGAAGCTGCTAATGCTGAACTT
TTTGCTAGTAATTTCAAAGACATGGATTACGTAAAAGTCCCAACGATATT
TTGGGAATACACCACACCACAGATTTTGACCATGGAGTATGTGCCGGGGA
TCAAAATAAACAGGATACAATCTTTAGATGAATTGGGTGTTGATCGAAAA
AGGTTGGGTCGATATGCGGTTGAATCTTACTTGGAACAAATTCTTTCACA
TGGTTTTTTTCATGCTGACCCTCATCCTGGAAATATCGCTGTAGATGATG
TAAATGGTGGAAGATTGATCTTCTATGATTTTGGTATGATGGGAAGTATT
AGTCCAAACATTAGAGAAGGTCTGCTTGAAACATTTTACGGAGTTTACGA
GAAGGATGCAGACAAGGTCCTTCAGGCAATGGTTCAAATGGGTGTTCTTG
TCCCTACTGGAGATACAACAGCTGTCAGGCGAACAGCACAGTTCTTCCTT
AACAGTTTTGAAGAGCGTCTTGCTGCACAAAGAAAAGAAAGAGAAATAAC
GACCCAAGAACTTGGCTTTAAAAAGCCATTGAGCAAGGAGGAAAAGATTG
AGAAAAAGAAGCAACGCCTTGCTGCAATAGGGGAAGATTTATTGGCCATT
GCAGCTGATCAACCTTTCCGATTTCCAGCAACATTCACATTTGTTGTCAG
AGCATTTTCAGTTTTAGATGGCATTGGGAAGGGCCTTGATCCTCGGTTTG
back to top