CX671704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP7 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16 Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505 DG + + E L E++ +E+ANA NF+D + VP ++ +Y + ++ ME + GI ++ +++L+ G + + L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D KV + V G + P Sbjct: 183 DGRRLRPQEVVREYEKTLLDELNLLRESANAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP3 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae (strain 342) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16 Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505 DG + + E L E++ +E+ANA NF+D + VP ++ +Y + ++ ME + GI ++ +++L+ G + + L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D KV + V G + P Sbjct: 183 DGRRLRPQEVVREYEKTLLDELNLLRESANAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y2090_ARATH (Putative ABC1 protein At2g40090 OS=Arabidopsis thaliana GN=At2g40090 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 48/174 (27.59%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 17 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDM-----DYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV-DDVNGGR---------LIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 D+ + DE + L +E+D+ EA N E NF+ + +YV PTI+W +T ++LTME++ G ++N + + +LG+ + + +++ E + HGF H DPH N+ V D +G R L+ D G+ + N R + + DA + + ++G Sbjct: 219 DYRWLLDEMSESLPKELDFLVEAKNNEKCLDNFRKLSPHIAEYVYAPTIYWNLSTSKLLTMEFMDGAQVNDVDKIRKLGIQPYEVSKLVSQTFAEMMFKHGFVHCDPHAANLIVRPDPSGKRNIYGKRKPQLVILDHGLYKELDFNTRFNYASLWKALVFSDAKAIKEHSEKLG 392
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPS (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pseudotuberculosis GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPP (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis (strain Pestoides F) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPN (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPG (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPE (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPB (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERPA (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347 The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bpback to top |