CX671704
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERP3 (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERE8 (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 DG + + E L E++ +EAANA NF+D + +P ++ +Y +L ME + GI ++ I +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D +V + V G Sbjct: 182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBF1 (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 2 Query: 23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 V + +E L E+D +EA+NA NF+ + + VP + + ++ ++ E + GI+++ I+ L+ G + K L V + Q+ FFHAD HPGN+ V D+ + I D G++G+++ + L E G + D KV Q V G Sbjct: 189 VKVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVILDLSSEHLMVSERIYGIQVSDIEQLERNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQLHVDSG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHESR (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-7) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2 Query: 62 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 E++ EA NA +NF D D + +P ++ E+ P+++ ME + GI ++ I +L G + K L VE + Q+ FFHAD HPGNI + D I D G+MG++S + L E F + +D ++ Q ++ G Sbjct: 202 ELNLKLEALNAIKLRNNFLDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHESM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-4) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2 Query: 62 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493 E++ EA NA +NF D D + +P ++ E+ P+++ ME + GI ++ I +L G + K L VE + Q+ FFHAD HPGNI + D I D G+MG++S + L E F + +D ++ Q ++ G Sbjct: 202 ELNLKLEALNAIKLRNNFLDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALTY (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella typhimurium GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505 DG + + E L E++ +E+ANA NF++ + +P ++ +Y + ++ ME + GI ++ + +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D KV + V G + P Sbjct: 183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALTI (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella typhi GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505 DG + + E L E++ +E+ANA NF++ + +P ++ +Y + ++ ME + GI ++ + +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D KV + V G + P Sbjct: 183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALSV (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella schwarzengrund (strain CVM19633) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505 DG + + E L E++ +E+ANA NF++ + +P ++ +Y + ++ ME + GI ++ + +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D KV + V G + P Sbjct: 183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALPK (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi A (strain AKU_12601) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505 DG + + E L E++ +E+ANA NF++ + +P ++ +Y + ++ ME + GI ++ + +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D KV + V G + P Sbjct: 183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALPC (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi C (strain RKS4594) GN=ubiB PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16 Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 Query: 2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505 DG + + E L E++ +E+ANA NF++ + +P ++ +Y + ++ ME + GI ++ + +L++ G + K L V+ + Q+ FFHAD HPGNI V + + I D G++GS++ + L E F + +D KV + V G + P Sbjct: 183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352 The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bpback to top |