CX671704

Overview
NameCX671704
Unique NameCX671704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERP3 (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_YERE8 (Probable ubiquinone biosynthesis protein ubiB OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     +  E    L  E++  +EAANA     NF+D   + +P ++ +Y    +L ME + GI ++ I +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +  +    I  D G++GS++   +  L E F   + +D  +V +  V  G
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFEDSPMLYIPEVYSDYCRESVLVMERIYGIPVSDIAALEDQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPHDPLYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBF1 (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            V + +E    L  E+D  +EA+NA     NF+  + + VP +  + ++  ++  E + GI+++ I+ L+  G + K L    V  +  Q+    FFHAD HPGN+ V  D+    + I  D G++G+++   +  L E   G +  D  KV Q  V  G
Sbjct:  189 VKVIEEYEKTLLDELDLRREASNAMQLRRNFEGSEELYVPEVILDLSSEHLMVSERIYGIQVSDIEQLERNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQLHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHESR (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-7) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2
Query:   62 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            E++   EA NA    +NF D D + +P ++ E+  P+++ ME + GI ++ I +L   G + K L    VE +  Q+    FFHAD HPGNI +  D       I  D G+MG++S   +  L E F   + +D  ++ Q  ++ G
Sbjct:  202 ELNLKLEALNAIKLRNNFLDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHESM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-4) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 2
Query:   62 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            E++   EA NA    +NF D D + +P ++ E+  P+++ ME + GI ++ I +L   G + K L    VE +  Q+    FFHAD HPGNI +  D       I  D G+MG++S   +  L E F   + +D  ++ Q  ++ G
Sbjct:  202 ELNLKLEALNAIKLRNNFLDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALTY (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella typhimurium GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALTI (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella typhi GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALSV (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella schwarzengrund (strain CVM19633) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALPK (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi A (strain AKU_12601) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALPC (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi C (strain RKS4594) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352          
The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
UBIB_YERP31.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]
UBIB_YERE81.679e-1630.12Probable ubiquinone biosynthesis protein ubiB OS=Y... [more]
UBIB_VIBF11.679e-1629.56Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_SHESR1.679e-1632.19Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHESM1.679e-1632.19Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALTY1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALTI1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALSV1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALPK1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALPC1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F07-L14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bp
AGATGGTGCAAAGAGAGATTGGGTTGCCATATATGATGAATGTGCTAGTG
TGTTATATCAGGAAATTGATTACACCCAGGAAGCTGCTAATGCTGAACTT
TTTGCTAGTAATTTCAAAGACATGGATTACGTAAAAGTCCCAACGATATT
TTGGGAATACACCACACCACAGATTTTGACCATGGAGTATGTGCCGGGGA
TCAAAATAAACAGGATACAATCTTTAGATGAATTGGGTGTTGATCGAAAA
AGGTTGGGTCGATATGCGGTTGAATCTTACTTGGAACAAATTCTTTCACA
TGGTTTTTTTCATGCTGACCCTCATCCTGGAAATATCGCTGTAGATGATG
TAAATGGTGGAAGATTGATCTTCTATGATTTTGGTATGATGGGAAGTATT
AGTCCAAACATTAGAGAAGGTCTGCTTGAAACATTTTACGGAGTTTACGA
GAAGGATGCAGACAAGGTCCTTCAGGCAATGGTTCAAATGGGTGTTCTTG
TCCCTACTGGAGATACAACAGCTGTCAGGCGAACAGCACAGTTCTTCCTT
AACAGTTTTGAAGAGCGTCTTGCTGCACAAAGAAAAGAAAGAGAAATAAC
GACCCAAGAACTTGGCTTTAAAAAGCCATTGAGCAAGGAGGAAAAGATTG
AGAAAAAGAAGCAACGCCTTGCTGCAATAGGGGAAGATTTATTGGCCATT
GCAGCTGATCAACCTTTCCGATTTCCAGCAACATTCACATTTGTTGTCAG
AGCATTTTCAGTTTTAGATGGCATTGGGAAGGGCCTTGATCCTCGGTTTG
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