CX671704

Overview
NameCX671704
Unique NameCX671704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALPB (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALPA (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi A GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALNS (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella newport (strain SL254) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALHS (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella heidelberg (strain SL476) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALG2 (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALEP (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella enteritidis PT4 (strain P125109) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALDC (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella dublin (strain CT_02021853) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALCH (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella choleraesuis GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SALA4 (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella agona (strain SL483) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.679e-16
Identity = 48/170 (28.24%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF++   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_ALISL (Probable ubiquinone biosynthesis protein ubiB OS=Aliivibrio salmonicida (strain LFI1238) GN=ubiB PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.193e-16
Identity = 46/159 (28.93%), Postives = 81/159 (50.94%), Query Frame = 2 
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            V + +E    L  E+D  +EA+NA     NF+  + + VP +  + ++  ++  E + GI+++ I+ L++ G + K L    V  +  Q+    FFHAD HPGN+ V  D+    + I  D G++G+++   +  L E   G +  D  KV Q  +  G
Sbjct:  189 VEVIEEYEKTLIDELDLRREASNAMQLRRNFEGSEELYVPEVILDVSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYRKVAQLHIDSG 347
The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
UBIB_SALPB1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALPA1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALNS1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALHS1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALG21.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALEP1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALDC1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALCH1.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SALA41.679e-1628.24Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_ALISL2.193e-1628.93Probable ubiquinone biosynthesis protein ubiB OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F07-L14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bp
AGATGGTGCAAAGAGAGATTGGGTTGCCATATATGATGAATGTGCTAGTG
TGTTATATCAGGAAATTGATTACACCCAGGAAGCTGCTAATGCTGAACTT
TTTGCTAGTAATTTCAAAGACATGGATTACGTAAAAGTCCCAACGATATT
TTGGGAATACACCACACCACAGATTTTGACCATGGAGTATGTGCCGGGGA
TCAAAATAAACAGGATACAATCTTTAGATGAATTGGGTGTTGATCGAAAA
AGGTTGGGTCGATATGCGGTTGAATCTTACTTGGAACAAATTCTTTCACA
TGGTTTTTTTCATGCTGACCCTCATCCTGGAAATATCGCTGTAGATGATG
TAAATGGTGGAAGATTGATCTTCTATGATTTTGGTATGATGGGAAGTATT
AGTCCAAACATTAGAGAAGGTCTGCTTGAAACATTTTACGGAGTTTACGA
GAAGGATGCAGACAAGGTCCTTCAGGCAATGGTTCAAATGGGTGTTCTTG
TCCCTACTGGAGATACAACAGCTGTCAGGCGAACAGCACAGTTCTTCCTT
AACAGTTTTGAAGAGCGTCTTGCTGCACAAAGAAAAGAAAGAGAAATAAC
GACCCAAGAACTTGGCTTTAAAAAGCCATTGAGCAAGGAGGAAAAGATTG
AGAAAAAGAAGCAACGCCTTGCTGCAATAGGGGAAGATTTATTGGCCATT
GCAGCTGATCAACCTTTCCGATTTCCAGCAACATTCACATTTGTTGTCAG
AGCATTTTCAGTTTTAGATGGCATTGGGAAGGGCCTTGATCCTCGGTTTG
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