CX671704

Overview
NameCX671704
Unique NameCX671704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_ACTPJ (Probable ubiquinone biosynthesis protein ubiB OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=ubiB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.166e-15
Identity = 44/146 (30.14%), Postives = 78/146 (53.42%), Query Frame = 2
Query:   38 ECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKV 469
            E    L  E+D T+E ANA    +NF++ + + VP ++ ++    ++ ME + GI ++ +++L   G D K L    V+ +  Q+    FFHAD H GNI V  +     + I  D G++G+++ N +  L E+F   + +D  +V
Sbjct:  198 EYEKTLLDELDLTREMANAIRLRNNFENSEMLYVPEMYPDFCHKNVIVMERIYGIPVSDVETLKANGTDMKLLAERGVQVFFTQVFRDSFFHADMHAGNIFVNPNHPENPQYIGIDCGIVGTLNQNDKRYLAESFVAFFNRDYRRV 343          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBVY (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio vulnificus (strain YJ016) GN=ubiB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.135e-15
Identity = 45/159 (28.30%), Postives = 78/159 (49.06%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            + +  E    L  E+D  +EAANA     NF D + + VP ++ +++   ++  E + GI+++ I  L   G + K L    V  +  Q+    FFHAD HPGN+ V  +     + I  D G++G+++   +  L E F   + +D  +V +  V  G
Sbjct:  189 IEVVREYEKTLLDELDLRREAANAIQLRRNFTDSEELYVPEVYPDFSNETVMVSERIYGIQVSDITGLKANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPEHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBVU (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio vulnificus GN=ubiB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.135e-15
Identity = 45/159 (28.30%), Postives = 78/159 (49.06%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            + +  E    L  E+D  +EAANA     NF D + + VP ++ +++   ++  E + GI+++ I  L   G + K L    V  +  Q+    FFHAD HPGN+ V  +     + I  D G++G+++   +  L E F   + +D  +V +  V  G
Sbjct:  189 IEVVREYEKTLLDELDLRREAANAIQLRRNFTDSEELYVPEVYPDFSNETVMVSERIYGIQVSDIAGLKANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPEHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHEWM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ubiB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.400e-15
Identity = 46/173 (26.59%), Postives = 84/173 (48.55%), Query Frame = 2
Query:   29 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 541
            + ++  + +  E++   EA NA    +NF D   + +P ++ E    +++ ME + GI ++ + +L   G + K L    VE +  Q+    FFHAD HPGNI V  +       I  D G+MG+++   +  L E F   + +D  ++ Q  ++ G + P  D  A  +  +
Sbjct:  191 VVEDYRTTIEGELNLKLEALNAVKLRNNFLDSGSLYIPYMYEELCFTRLIVMERIEGIPVSDMAALKAQGTNLKVLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPEDPYYIGLDCGIMGTLTEEDKRYLAENFLAFFNRDYHRIAQLYIESGWVSPDTDIAAFEQAVK 363          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_EDWI9 (Probable ubiquinone biosynthesis protein ubiB OS=Edwardsiella ictaluri (strain 93-146) GN=ubiB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.400e-15
Identity = 50/170 (29.41%), Postives = 80/170 (47.06%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +EAANA     NF     + +P +F +Y    +L ME + G+ ++ I +L     + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  182 DGRRLRPREVVREYEKTLLDELNLLREAANAIQLRRNFDASPMLYIPEVFSDYCRESVLVMERIYGVPVSDIAALRAQNTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPQDPQYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 351          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBSL (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio splendidus (strain LGP32) GN=ubiB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.053e-15
Identity = 46/159 (28.93%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVN--GGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            V +  E    L  E+D  +EAANA     NF+  + + VP +  + ++  ++  E + GI+++ I++L+  G + K L    V  +  Q+    FFHAD HPGN+ V+  N    + I  D G++G+++   +  L E     + +D  KV +  V  G
Sbjct:  189 VEVVHEYEKTLLDELDLRREAANAIQLRRNFEGSEELYVPEVIPDLSSETLMVSERIYGIQVSDIETLEANGTNMKLLAERGVTVFFTQVFRDSFFHADMHPGNVFVNPENPDNPQWIGLDCGIVGTLNSEDKRYLAENLLAFFNRDYRKVAELHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPW (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ubiB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 45/173 (26.01%), Postives = 86/173 (49.71%), Query Frame = 2
Query:   29 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 541
            + ++  + +  E++   EA NA    +NF D + + +P ++ E    +++ ME + G+ ++   +L+  G + K L    VE +  Q+    FFHAD HPGNI V  +  N    I  D G+MG+++   +  L E F   + +D  ++ Q  ++ G +    D +A  +  +
Sbjct:  191 VVEDYRTTIEGELNLKLEALNAIKLRNNFLDSNALYIPYMYEELCFTRLIVMERIDGVPVSDKAALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPNDPFYIGLDCGIMGTLTDEDKRYLAENFLAFFNRDYRRIAQLYIESGWVSADTDISAFEQAVK 363          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_PASMU (Probable ubiquinone biosynthesis protein ubiB OS=Pasteurella multocida GN=ubiB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 46/166 (27.71%), Postives = 84/166 (50.60%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDV--NGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            +G +   V +  E    L  E+D  +E ANA    +NF++   + +P ++ ++    ++ ME + GI ++ I+ L   G + K L    V+ +  Q+    FFHAD HPGNI V+    +  + I  D G++G ++ + +  L E+F   + +D  +V +  V  G
Sbjct:  191 EGRRLRPVEVVREYEKNLRDELDLRREMANAIQLRANFENSPMLYIPEMYKQFCHQTVIVMERIYGIPVSNIEELHANGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVNRAHPDDPQYIGIDCGIVGRLNDHDKRYLAESFVAFFNRDYRRVAEMHVASG 356          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: ADCK1_XENLA (Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus laevis GN=adck1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.203e-14
Identity = 40/154 (25.97%), Postives = 77/154 (50.00%), Query Frame = 2
Query:   17 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV---DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKV 469
            +++ + +E    L  E+D+  E  NAE  +S      ++++P I+WE +T ++L MEY+ G ++N  + +    +D  ++     + Y E I  HGF H DPHPGN+ V    +     +I  D G+   ++ + R      +  +   D +++
Sbjct:  208 EFMWLIEEAKKNLPLELDFQNEGRNAEKMSSIVSSFSFLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDVNKVSHALGKLYSEMIFVHGFVHCDPHPGNVLVRQNPENCAPEIILLDHGLYQVLTESFRLDYCSLWQALIAADKERI 361          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBCM (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.571e-14
Identity = 45/159 (28.30%), Postives = 77/159 (48.43%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            V +  E    L  E+D  +EAANA     NF++ + + VP +  ++    ++  E + GI+++ +  L   G + K L    V  +  Q+    FFHAD HPGN+ V  +     + I  D G++G+++   +  L E F   + +D  +V Q  V  G
Sbjct:  189 VEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSG 347          
The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
UBIB_ACTPJ3.166e-1530.14Probable ubiquinone biosynthesis protein ubiB OS=A... [more]
UBIB_VIBVY4.135e-1528.30Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_VIBVU4.135e-1528.30Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_SHEWM5.400e-1526.59Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_EDWI95.400e-1529.41Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_VIBSL7.053e-1528.93Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_SHEPW1.203e-1426.01Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_PASMU1.203e-1427.71Probable ubiquinone biosynthesis protein ubiB OS=P... [more]
ADCK1_XENLA1.203e-1425.97Uncharacterized aarF domain-containing protein kin... [more]
UBIB_VIBCM1.571e-1428.30Probable ubiquinone biosynthesis protein ubiB OS=V... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F07-L14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bp
AGATGGTGCAAAGAGAGATTGGGTTGCCATATATGATGAATGTGCTAGTG
TGTTATATCAGGAAATTGATTACACCCAGGAAGCTGCTAATGCTGAACTT
TTTGCTAGTAATTTCAAAGACATGGATTACGTAAAAGTCCCAACGATATT
TTGGGAATACACCACACCACAGATTTTGACCATGGAGTATGTGCCGGGGA
TCAAAATAAACAGGATACAATCTTTAGATGAATTGGGTGTTGATCGAAAA
AGGTTGGGTCGATATGCGGTTGAATCTTACTTGGAACAAATTCTTTCACA
TGGTTTTTTTCATGCTGACCCTCATCCTGGAAATATCGCTGTAGATGATG
TAAATGGTGGAAGATTGATCTTCTATGATTTTGGTATGATGGGAAGTATT
AGTCCAAACATTAGAGAAGGTCTGCTTGAAACATTTTACGGAGTTTACGA
GAAGGATGCAGACAAGGTCCTTCAGGCAATGGTTCAAATGGGTGTTCTTG
TCCCTACTGGAGATACAACAGCTGTCAGGCGAACAGCACAGTTCTTCCTT
AACAGTTTTGAAGAGCGTCTTGCTGCACAAAGAAAAGAAAGAGAAATAAC
GACCCAAGAACTTGGCTTTAAAAAGCCATTGAGCAAGGAGGAAAAGATTG
AGAAAAAGAAGCAACGCCTTGCTGCAATAGGGGAAGATTTATTGGCCATT
GCAGCTGATCAACCTTTCCGATTTCCAGCAACATTCACATTTGTTGTCAG
AGCATTTTCAGTTTTAGATGGCATTGGGAAGGGCCTTGATCCTCGGTTTG
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