CX671704

Overview
NameCX671704
Unique NameCX671704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5086 contig Csv1_Contig5086:1..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBCH (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae GN=ubiB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.571e-14
Identity = 45/159 (28.30%), Postives = 77/159 (48.43%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            V +  E    L  E+D  +EAANA     NF++ + + VP +  ++    ++  E + GI+++ +  L   G + K L    V  +  Q+    FFHAD HPGN+ V  +     + I  D G++G+++   +  L E F   + +D  +V Q  V  G
Sbjct:  189 VEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_VIBC3 (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ubiB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.571e-14
Identity = 45/159 (28.30%), Postives = 77/159 (48.43%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            V +  E    L  E+D  +EAANA     NF++ + + VP +  ++    ++  E + GI+++ +  L   G + K L    V  +  Q+    FFHAD HPGN+ V  +     + I  D G++G+++   +  L E F   + +D  +V Q  V  G
Sbjct:  189 VEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: ADCK1_XENTR (Uncharacterized aarF domain-containing protein kinase 1 OS=Xenopus tropicalis GN=adck1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.571e-14
Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = 2
Query:   17 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV 343
            +++ + +E    L  E+D+  E  NAE  ++      ++++P I+WE +T ++L MEY+ G ++N  + +    +D  ++ R   + Y E I  HGF H DPHPGN+ V
Sbjct:  208 EFMWLIEEAKKNLPLELDFENEGRNAEKMSAIVSSFSFLRIPRIYWELSTKRVLVMEYMEGGQVNDREYMKRNQIDINQVARALGQLYSEMIFVHGFVHCDPHPGNVLV 316          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPA (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ubiB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.500e-14
Identity = 45/173 (26.01%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   29 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 541
            + ++  + +  E++   EA NA    +NF D + + +P ++ E    +++ ME + GI ++   +L+  G + K L    VE +  Q+    FFHAD HPGN+ V  +  N    I  D G+MG+++   +  L E F   + +D  ++ Q  ++ G +    D  A  +  +
Sbjct:  191 VVEDYRTTIEGELNLKLEALNAIKLRNNFIDSNALYIPYMYEELCFTRLIVMERIDGIPVSDKVALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNVFVSREHPNDPFYIGLDCGIMGTLTDEDKRYLAENFLAFFNRDYRRIAQLYIESGWVSADTDVGAFEQAVK 363          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHELP (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=ubiB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.572e-14
Identity = 44/167 (26.35%), Postives = 82/167 (49.10%), Query Frame = 2
Query:   29 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTA 523
            + ++  + +  E++   EA NA    +NF D   + +P ++ E+   +++ ME + G+ ++   +L+  G + K L    VE +  Q+    FFHAD HPGNI V  +       I  D G+MG+++   +  L E F   + +D  ++ Q  ++ G +    D  A
Sbjct:  191 VVEDYRTTIEGELNLKLEALNAIKLRNNFIDSGALYIPKMYEEFCFTRLIVMERIYGVPVSDRAALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSTEHPEDPFYIGLDCGIMGTLTEQDKRYLAENFLAFFNRDYTRIAQLYIESGWVAADTDLVA 357          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHEFN (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella frigidimarina (strain NCIMB 400) GN=ubiB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 44/166 (26.51%), Postives = 84/166 (50.60%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            DG +     + ++  + +  E++   EA NA    +NF   + + VP ++ E++  +++ ME + GI ++  ++L   G + K L    VE +  Q+    FFHAD HPGNI +  +  +    I  D G+MG+++   +  L E F   + +D  ++ Q  ++ G
Sbjct:  182 DGNRLRPAEVIEDYRTTILGELNLKLEALNAIKLRNNFLGSNSLYVPFVYEEHSYQRLMVMERIYGIPVSDTEALRAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISREHPDDPFYIGLDCGIMGTLTEVDKRYLAENFLAFFNRDYHRIAQLYIESG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_BLOPB (Probable ubiquinone biosynthesis protein ubiB OS=Blochmannia pennsylvanicus (strain BPEN) GN=ubiB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.018e-13
Identity = 41/166 (24.70%), Postives = 78/166 (46.99%), Query Frame = 2
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGG--RLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMG 493
            +G K  +  +  E    L+ E++  +E AN      NFK    + +P ++ ++ +  ++ ME + GI +  + +L +   + K L    +E +  Q+    FFH D HPGNI +   + G  + I  D G++GS++   +  L   F   +  D  K+ +  +  G
Sbjct:  182 EGRKFKFSEVVSEYEKTLFNELNLLKETANTIQLRRNFKKSQILYIPKVYVDFCSENVMVMERIYGIPVYNLVALKKQKTNMKLLAERGIEIFFTQVFRDSFFHGDMHPGNIFISYKHPGNPKYISVDCGIVGSLNKKDKYYLAANFIAFFNHDYRKIAELHLDSG 347          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y5520_ARATH (Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana GN=At5g05200 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.588e-12
Identity = 56/260 (21.54%), Postives = 113/260 (43.46%), Query Frame = 2
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYV---KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP 793
            V I  +    + +E+D+ +EA N E F    + M        P ++   ++ ++LTME + G+ +  + S+  L    +     A+  +   +L+   FHAD H GN+ +  +  GR+ F DFG++G ISP     +      +  ++ + +  A++QMG      D  A  +  +   +S +E       E  + T         +    +   ++++ A+  DL+ ++     +FP  F  +++     D   + L P
Sbjct:  261 VGIVKDIRESMLEEVDFNKEAQNIESFKRYLETMGLTGQATAPRVYKYCSSRRVLTMERLYGVPLTDLDSIRSLVSSPENSLITALNVWFGSLLACESFHADVHAGNLWL--LRDGRIGFLDFGIVGRISPKTWAAMEVFLASIATEEYESMASALIQMGATNRDVDGKAFAKDLEKMFSSIQE----LDTEIVVATARGTNSDTTAVAANVVMDERQMNALFLDLVRVSESYGLKFPREFALLLKQLLYFDRYTRLLAP 514          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: Y445_PBCV1 (Uncharacterized protein A445L OS=Paramecium bursaria Chlorella virus 1 GN=A445L PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.588e-12
Identity = 61/249 (24.50%), Postives = 102/249 (40.96%), Query Frame = 2
Query:   29 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGI 775
            I  EC  VL  E++   EA    LF   F  + ++ +PT++    T  I   EYVP  KI             + L R   E Y+   +  G  HADPH GNI +     G  + YDFG +  +  N ++ + +    V   D D V++++  MGV+   G    +++              A  K ++I   E  F   LSK  +    + R+               F     + +++R+ ++++GI
Sbjct:  168 IVRECQPVLLGELNLKLEAKAMSLFKKKFASIPWLTIPTVYEAGETYMI--SEYVPSKKITA-------AYPNEMLARRLFELYIYMTIDIGLVHADPHAGNIGIK--KDGTFVLYDFGAIIDVR-NAKQYIAKCLKSVVIGDTDGVVRSLEDMGVIKSGGSVARLKK--------------AIPKIKKIMESE-DFNVELSKLPEFTSNENRI---------------FELTTRYIYLIRSLTIVEGI 374          
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: YP109_YEAST (ABC1 family protein YPL109C, mitochondrial OS=Saccharomyces cerevisiae GN=YPL109C PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.622e-11
Identity = 66/286 (23.08%), Postives = 121/286 (42.31%), Query Frame = 2
Query:   17 DWVAI---YDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDR---KRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVN----GGRLI---FYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQ--AMVQMGVLVPTGDTTAVRRTAQF-FLNSFEERLAAQRKEREITTQELGFKKPL---SKEEKIEKKKQRLAAIG--------EDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP 793
            +W+++    D+ + ++  ++D   EA N E F  NFK+   VK P  F   +   ++  E+V G+ + +  S  +   D    K++    V+++L+ ++   F HAD HPGN+ +  V     G  +I      + +   +   I E   + F G  +            +  G++    +   +   A F  L  F+   A +       T E    K +     E+ ++K KQR   +G        + +L++      R  + F  VV A  +L+GIG+ LDP
Sbjct:  306 EWLSLPSEVDQFSILMNIQLDLRIEALNLERFNENFKNSIQVKFPKPFLPLSNRDVMFEEHVYGLSMEKFLSTKKQINDVELCKKVSDPFVDAFLQMLILDDFVHADLHPGNVIIRFVKTNKYGTNIISSELESYRITHDLRKKIEEDQDQDFVGKLKSVLTNYTPQICFIDTGIITELNEKNRINFIALFNALARFDGYRAGELMIERSRTPETAIDKEVFAFKVEKLVDKVKQRTFTLGTVSIGDLLDQMLSMVRSHHVRMESDFVSVVVAILLLEGIGRQLDP 591          
The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
UBIB_VIBCH1.571e-1428.30Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_VIBC31.571e-1428.30Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
ADCK1_XENTR1.571e-1432.11Uncharacterized aarF domain-containing protein kin... [more]
UBIB_SHEPA3.500e-1426.01Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHELP4.572e-1426.35Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHEFN7.798e-1426.51Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_BLOPB1.018e-1324.70Probable ubiquinone biosynthesis protein ubiB OS=B... [more]
Y5520_ARATH5.588e-1221.54Uncharacterized aarF domain-containing protein kin... [more]
Y445_PBCV15.588e-1224.50Uncharacterized protein A445L OS=Paramecium bursar... [more]
YP109_YEAST3.622e-1123.08ABC1 family protein YPL109C, mitochondrial OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F07-L14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bp
AGATGGTGCAAAGAGAGATTGGGTTGCCATATATGATGAATGTGCTAGTG
TGTTATATCAGGAAATTGATTACACCCAGGAAGCTGCTAATGCTGAACTT
TTTGCTAGTAATTTCAAAGACATGGATTACGTAAAAGTCCCAACGATATT
TTGGGAATACACCACACCACAGATTTTGACCATGGAGTATGTGCCGGGGA
TCAAAATAAACAGGATACAATCTTTAGATGAATTGGGTGTTGATCGAAAA
AGGTTGGGTCGATATGCGGTTGAATCTTACTTGGAACAAATTCTTTCACA
TGGTTTTTTTCATGCTGACCCTCATCCTGGAAATATCGCTGTAGATGATG
TAAATGGTGGAAGATTGATCTTCTATGATTTTGGTATGATGGGAAGTATT
AGTCCAAACATTAGAGAAGGTCTGCTTGAAACATTTTACGGAGTTTACGA
GAAGGATGCAGACAAGGTCCTTCAGGCAATGGTTCAAATGGGTGTTCTTG
TCCCTACTGGAGATACAACAGCTGTCAGGCGAACAGCACAGTTCTTCCTT
AACAGTTTTGAAGAGCGTCTTGCTGCACAAAGAAAAGAAAGAGAAATAAC
GACCCAAGAACTTGGCTTTAAAAAGCCATTGAGCAAGGAGGAAAAGATTG
AGAAAAAGAAGCAACGCCTTGCTGCAATAGGGGAAGATTTATTGGCCATT
GCAGCTGATCAACCTTTCCGATTTCCAGCAACATTCACATTTGTTGTCAG
AGCATTTTCAGTTTTAGATGGCATTGGGAAGGGCCTTGATCCTCGGTTTG
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