CX671704

Overview
NameCX671704
Unique NameCX671704
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5086 contig Csv1_Contig5086:1..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_AERS4 (Probable ubiquinone biosynthesis protein ubiB OS=Aeromonas salmonicida (strain A449) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.418e-17
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 2 
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            + + +E    +  E++  +EAANA     NF   D + VP +F E+    +L ME + GI ++ I +L+  G + K L    VE +  Q+    FFHAD HPGNI V  +  +    I  D G++G+++   +  L E F   + +D  +V +  V+ G + P
Sbjct:  189 IEVVEEYRKTILDELNLMREAANAIQLRRNFTGSDALYVPEVFTEHCREHVLVMERIYGIPVSDIPALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSYEHPDNPLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAELHVESGWVPP 351
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_AERHH (Probable ubiquinone biosynthesis protein ubiB OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.418e-17
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 2 
Query:   23 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            + + +E    +  E++  +EAANA     NF   + + VP +F E+   Q+L ME + GI ++ I +L+  G + K L    VE +  Q+    FFHAD HPGNI V  +       I  D G++G+++   +  L E F   + +D  +V +  V+ G + P
Sbjct:  189 IEVVEEYRKTILDELNLMREAANAIQLRRNFTGSEALYVPEVFTEHCREQVLVMERIYGIPVSDIAALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSYEHPENPLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAELHVESGWVPP 351
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHISS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella sonnei (strain Ss046) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHIFL (Probable ubiquinone biosynthesis protein ubiB OS=Shigella flexneri GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHIF8 (Probable ubiquinone biosynthesis protein ubiB OS=Shigella flexneri serotype 5b (strain 8401) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHIDS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHIBS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella boydii serotype 4 (strain Sb227) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_SHIB3 (Probable ubiquinone biosynthesis protein ubiB OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_ESCF3 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
[Close]
BLAST of CX671704 vs. ExPASy Swiss-Prot
Match: UBIB_ECOUT (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain UTI89 / UPEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.770e-17
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 2 
Query:    2 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAV--DDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDADKVLQAMVQMGVLVP 505
            DG +     +  E    L  E++  +E+ANA     NF+D   + +P ++ +Y +  ++ ME + GI ++ + +L++ G + K L    V+ +  Q+    FFHAD HPGNI V  +     + I  D G++GS++   +  L E F   + +D  KV +  V  G + P
Sbjct:  183 DGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPP 352
The following BLAST results are available for this feature:
BLAST of CX671704 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
UBIB_AERS44.418e-1730.67Probable ubiquinone biosynthesis protein ubiB OS=A... [more]
UBIB_AERHH4.418e-1730.67Probable ubiquinone biosynthesis protein ubiB OS=A... [more]
UBIB_SHISS5.770e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHIFL5.770e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHIF85.770e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHIDS5.770e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHIBS5.770e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHIB35.770e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_ESCF35.770e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_ECOUT5.770e-1728.82Probable ubiquinone biosynthesis protein ubiB OS=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F07_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F07-L14-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671704 ID=CX671704; Name=CX671704; organism=Citrus sinensis; type=EST; length=800bp
AGATGGTGCAAAGAGAGATTGGGTTGCCATATATGATGAATGTGCTAGTG
TGTTATATCAGGAAATTGATTACACCCAGGAAGCTGCTAATGCTGAACTT
TTTGCTAGTAATTTCAAAGACATGGATTACGTAAAAGTCCCAACGATATT
TTGGGAATACACCACACCACAGATTTTGACCATGGAGTATGTGCCGGGGA
TCAAAATAAACAGGATACAATCTTTAGATGAATTGGGTGTTGATCGAAAA
AGGTTGGGTCGATATGCGGTTGAATCTTACTTGGAACAAATTCTTTCACA
TGGTTTTTTTCATGCTGACCCTCATCCTGGAAATATCGCTGTAGATGATG
TAAATGGTGGAAGATTGATCTTCTATGATTTTGGTATGATGGGAAGTATT
AGTCCAAACATTAGAGAAGGTCTGCTTGAAACATTTTACGGAGTTTACGA
GAAGGATGCAGACAAGGTCCTTCAGGCAATGGTTCAAATGGGTGTTCTTG
TCCCTACTGGAGATACAACAGCTGTCAGGCGAACAGCACAGTTCTTCCTT
AACAGTTTTGAAGAGCGTCTTGCTGCACAAAGAAAAGAAAGAGAAATAAC
GACCCAAGAACTTGGCTTTAAAAAGCCATTGAGCAAGGAGGAAAAGATTG
AGAAAAAGAAGCAACGCCTTGCTGCAATAGGGGAAGATTTATTGGCCATT
GCAGCTGATCAACCTTTCCGATTTCCAGCAACATTCACATTTGTTGTCAG
AGCATTTTCAGTTTTAGATGGCATTGGGAAGGGCCTTGATCCTCGGTTTG
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