CX671696

Overview
NameCX671696
Unique NameCX671696
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.880e-31
Identity = 49/73 (67.12%), Postives = 58/73 (79.45%), Query Frame = 1 
Query:  229 IKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHKD 447
            IKNP YKG W AP IDNPD+  D  LY + +LK+VG ELWQVKSG++FDN+LV+DD E A K AE+TWGKHKD
Sbjct:  284 IKNPAYKGIWVAPDIDNPDYVHDDKLYNFKDLKFVGFELWQVKSGSIFDNILVTDDLEAAKKFAEDTWGKHKD 356

HSP 2 Score: 47.3654 bits (111), Expect = 1.880e-31
Identity = 23/52 (44.23%), Postives = 25/52 (48.08%), Query Frame = 2 
Query:    2 KKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKVTK 157
            KKPEG+DDIP  I                     P IPNPEYKG WK K+ K
Sbjct:  234 KKPEGWDDIPATIADKDAKKPEDWDDEEDGTWEPPMIPNPEYKGEWKAKMIK 285
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.719e-22
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHK 444
            ++I NP+YKG W  P IDNP++  DP +Y Y N   +G++LWQVKSGT+FDN L+++D  YA +   ETWG  K
Sbjct:  278 RQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351

HSP 2 Score: 32.3426 bits (72), Expect = 2.719e-22
Identity = 17/48 (35.42%), Postives = 20/48 (41.67%), Query Frame = 2 
Query:    5 KPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPK 148
            KPE +D  P+ I                     P I NPEYKG WKP+
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPR 278
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.719e-22
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHK 444
            ++I NP+YKG W  P IDNP++  DP +Y Y N   +G++LWQVKSGT+FDN L+++D  YA +   ETWG  K
Sbjct:  278 RQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351

HSP 2 Score: 32.3426 bits (72), Expect = 2.719e-22
Identity = 17/48 (35.42%), Postives = 20/48 (41.67%), Query Frame = 2 
Query:    5 KPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPK 148
            KPE +D  P+ I                     P I NPEYKG WKP+
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPR 278
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.719e-22
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHK 444
            ++I NP+YKG W  P IDNP++  DP +Y Y N   +G++LWQVKSGT+FDN L+++D  YA +   ETWG  K
Sbjct:  278 RQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351

HSP 2 Score: 32.3426 bits (72), Expect = 2.719e-22
Identity = 17/48 (35.42%), Postives = 20/48 (41.67%), Query Frame = 2 
Query:    5 KPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPK 148
            KPE +D  P+ I                     P I NPEYKG WKP+
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPR 278
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.719e-22
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHK 444
            ++I NP+YKG W  P IDNP++  DP +Y Y N   +G++LWQVKSGT+FDN L+++D  YA +   ETWG  K
Sbjct:  278 RQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351

HSP 2 Score: 32.3426 bits (72), Expect = 2.719e-22
Identity = 17/48 (35.42%), Postives = 20/48 (41.67%), Query Frame = 2 
Query:    5 KPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPK 148
            KPE +D  P+ I                     P I NPEYKG WKP+
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPR 278
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_SCHMA (Calreticulin OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.608e-22
Identity = 38/75 (50.67%), Postives = 55/75 (73.33%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHKD 447
            ++I NP YKG+WK   IDNP++K DP+LYV  ++ YVG +LWQV SG++FDN+L++D P++A +  E  W K  D
Sbjct:  276 RRIDNPKYKGEWKPVQIDNPEYKHDPELYVLNDIGYVGFDLWQVDSGSIFDNILITDSPDFAKEEGERLWRKRYD 350

HSP 2 Score: 29.6462 bits (65), Expect = 4.608e-22
Identity = 16/49 (32.65%), Postives = 19/49 (38.78%), Query Frame = 2 
Query:    2 KKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPK 148
            KKP+ +D  PK I                     P   NPEYKG W P+
Sbjct:  229 KKPDNWDQ-PKTIPDMDAKKPDDWDDAMDGEWERPQKDNPEYKGEWTPR 276
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_DICDI (Calreticulin OS=Dictyostelium discoideum GN=crtA PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 7.788e-22
Identity = 34/70 (48.57%), Postives = 54/70 (77.14%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETW 432
            +KI NP YKG+W  P+IDNP++ +D +LY++ +L  +G ELWQVKSG++F+N++V+D  E A   +E+T+
Sbjct:  279 KKIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDFSEKTF 348

HSP 2 Score: 40.817 bits (94), Expect = 7.788e-22
Identity = 20/48 (41.67%), Postives = 21/48 (43.75%), Query Frame = 2 
Query:    5 KPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPK 148
            KP G+DDIP  I                     PTI NPEYKG WK K
Sbjct:  232 KPAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAK 279
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_BOVIN (Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.903e-21
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHK 444
            ++I NP YKG W  P IDNP++  D ++Y Y N   +G++LWQVKSGT+FDN L+++D  YA +   ETWG  K
Sbjct:  278 RQIDNPEYKGIWIHPEIDNPEYSPDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351

HSP 2 Score: 32.3426 bits (72), Expect = 2.903e-21
Identity = 17/48 (35.42%), Postives = 20/48 (41.67%), Query Frame = 2 
Query:    5 KPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPK 148
            KPE +D  P+ I                     P I NPEYKG WKP+
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPR 278
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_CAEBR (Calreticulin OS=Caenorhabditis briggsae GN=crt-1 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.780e-21
Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHKDV 450
            ++IKNP YKGKW  P I+NP++  D +LY+Y N   +G +LWQVKSGT+FDNVL++D  E A   A ET+ K K V
Sbjct:  273 KQIKNPAYKGKWIHPEIENPEYTPDDELYLYENWGAIGFDLWQVKSGTIFDNVLITDSVEEAEAHAAETFDKLKTV 348

HSP 2 Score: 33.113 bits (74), Expect = 3.780e-21
Identity = 13/18 (72.22%), Postives = 13/18 (72.22%), Query Frame = 2 
Query:  104 PTIPNPEYKGPWKPKVTK 157
            P I NPEYKG WKPK  K
Sbjct:  259 PMIDNPEYKGEWKPKQIK 276
[Close]
BLAST of CX671696 vs. ExPASy Swiss-Prot
Match: CALR_RABIT (Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.912e-21
Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:  223 QKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGKHK 444
            ++I NP+YKG W  P IDNP++  D ++Y Y +   +G++LWQVKSGT+FDN L+++D  YA +   ETWG  K
Sbjct:  278 RQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351

HSP 2 Score: 32.3426 bits (72), Expect = 4.912e-21
Identity = 17/48 (35.42%), Postives = 20/48 (41.67%), Query Frame = 2 
Query:    5 KPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPK 148
            KPE +D  P+ I                     P I NPEYKG WKP+
Sbjct:  232 KPEDWDK-PEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPR 278
The following BLAST results are available for this feature:
BLAST of CX671696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
CALR_CHLRE1.880e-3167.12Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=... [more]
CALR_MACFU2.719e-2251.35Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=... [more]
CALR_MACFA2.719e-2251.35Calreticulin OS=Macaca fascicularis GN=CALR PE=2 S... [more]
CALR_HUMAN2.719e-2251.35Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1[more]
CALR_CERAE2.719e-2251.35Calreticulin OS=Cercopithecus aethiops GN=CALR PE=... [more]
CALR_SCHMA4.608e-2250.67Calreticulin OS=Schistosoma mansoni PE=2 SV=2[more]
CALR_DICDI7.788e-2248.57Calreticulin OS=Dictyostelium discoideum GN=crtA P... [more]
CALR_BOVIN2.903e-2150.00Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2[more]
CALR_CAEBR3.780e-2153.95Calreticulin OS=Caenorhabditis briggsae GN=crt-1 P... [more]
CALR_RABIT4.912e-2148.65Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12F03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12F03-L6-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671696 ID=CX671696; Name=CX671696; organism=Citrus sinensis; type=EST; length=797bp
CAAGAAGCCAGAGGGCTATGATGACATTCCAAAGGAGATAACAGATCCTG
ATGCCAAGAAGCCTGATGATTGGGATGATGAGGAAGATGGTGAATGGACA
GCTCCAACCATCCCTAACCCAGAGTACAAGGGTCCATGGAAGCCAAAGGT
TACTAAAATTCTAGATTAATTTGAACCATGTAAATATGGTTTTGGCTATC
TTGTAACTGTGTTTTGCCTCTGCAGAAAATTAAGAACCCTAATTACAAGG
GCAAGTGGAAGGCTCCAATGATTGACAACCCAGATTTCAAGGATGACCCA
GACCTTTATGTGTATCCCAACTTGAAGTATGTTGGCATTGAGTTGTGGCA
GGTGAAATCTGGAACCATGTTTGACAATGTCTTGGTTAGTGATGATCCAG
AGTATGCCAATAAGTTGGCCGAAGAAACATGGGGAAAGCATAAGGATGTA
TGATTGTTTTCTCCTCATCAAATCTGTCTCATAACTGATACTTACAAGCC
TCAGTATTTGATTTGGAGACCTATTGTTTTTGCAGGCCGAGAAGGCAGCA
TTTGATGAGGCCGAGAAGAAGAGAGAGGAGGAGGTGCTTTTTTGCTCAAT
TACTTTGTTGCACATTTTATTTTTTCTTTGGAATTGGGTTTTTAGCATAC
TTAGCTGAGTTTCCAAAGACATAATCATTTACCTAGATGAAAACTTATCT
GTTGAAAACTTTTTTGATTCTATTCTGTGTTACCAGTTATGCTAACTTTC
TGAAATGTGGTTAACAGGAATCAAAGGACGCACCTGATTCTGATGCT
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