CX671688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC1_DEBHA (Superoxide dismutase [Cu-Zn] 1 OS=Debaryomyces hansenii GN=SOD1 PE=1 SV=4) HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28 Identity = 62/124 (50.00%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNG-VTHVKGKITGLKPG-LHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G + V G ++F Q T + +I+G L GFH+H GD TNGC S GPHFNP K+HGAP D+ RH GDLGN+ GVA+ S D + L GQ+SILGR VV+HA DDLGKG Sbjct: 7 VLRGDSKVSGVVNFEQSSESDPTTITWEISGNDANALRGFHVHTFGDNTNGCTSAGPHFNPFTKEHGAPEDDNRHVGDLGNVTTDTSGVAKGSKQDLFVKLIGQNSILGRTVVIHAGTDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_YARLI (Superoxide dismutase [Cu-Zn] OS=Yarrowia lipolytica GN=SOD1 PE=3 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28 Identity = 62/127 (48.82%), Postives = 82/127 (64.57%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQ----GPNGVTHVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G + V G++ F Q GP VT+ I G P GFH+H GD TNGC S GPHFNP KK+HG P+D+ERH GDLGN+ +GVA+ + D ++ L+G +SI+GR VV+H DDLGKG Sbjct: 7 VLRGDSKVSGTVTFEQDSESGPVTVTY---DIKGNDPNAERGFHVHEFGDNTNGCTSAGPHFNPFKKNHGGPTDSERHVGDLGNVKTDSEGVAKGVLKDSLLKLTGDNSIVGRTVVIHGGEDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DROOB (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila obscura GN=Sod PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28 Identity = 61/108 (56.48%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 112 KGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHAD 432 KG++ F Q + V G++ GL GLHGFH+H GD TNGC S+GPHFNP K+HGAP+D RH GDLGNI A D VSI D I L G SI+GR VVVHAD Sbjct: 6 KGTVFFEQETSEAPVKVTGEVLGLTKGLHGFHVHEFGDNTNGCMSSGPHFNPRSKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DROTO (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila tolteca GN=Sod PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27 Identity = 60/108 (55.56%), Postives = 72/108 (66.67%), Query Frame = 1 Query: 112 KGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHAD 432 KG++ F Q + V G++ GL GLHGFH+H G+ TNGC S+GPHFNP K+HGAP+D RH GDLGNI A D VSI D I L G +SI+GR VVVHAD Sbjct: 6 KGTVFFEQETSEAPVKVTGEVLGLTKGLHGFHVHEFGNNTNGCMSSGPHFNPGNKEHGAPTDGNRHLGDLGNIQAAGDSPTAVSITDSKITLFGANSIIGRTVVVHAD 113
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_YEAST (Superoxide dismutase [Cu-Zn] OS=Saccharomyces cerevisiae GN=SOD1 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 62/124 (50.00%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V G + F Q T V +I G P GFHIH GD TNGC S GPHFNP KK HGAP+D RH GD+GN+ +GVA+ S D +I L G S++GR+VV+HA DDLGKG Sbjct: 7 VLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DROMD (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila madeirensis GN=Sod PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 60/108 (55.56%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 112 KGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHAD 432 KG + F Q + V G++ GL GLHGFH+H GD TNGC S+GPH+NP K+HGAP+D RH GDLGNI A D VSI D I L G SI+GR VVVHAD Sbjct: 6 KGIVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHYNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODE_CAEEL (Extracellular superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-4 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 103 TSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 T + G++ F Q + G ++GL G HGFHIH GDT NGC S G H+NP K HGAP D+ RH GDLGNI + G +S++D + LSGQ+SI+GR+VV+H DDLG+G Sbjct: 38 TELIGTIDFDQS-GSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRG 153
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DROPE (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila persimilis GN=Sod PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 61/108 (56.48%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 112 KGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHAD 432 KG++ F Q + V G+ GL GLHGFH+H GD TNGC S+GPHFNP K+HGAP+D RH GDLGNI A D VSI D I L G SI+GR VVVHAD Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DROPB (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila pseudoobscura bogotana GN=Sod PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 61/108 (56.48%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 112 KGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHAD 432 KG++ F Q + V G+ GL GLHGFH+H GD TNGC S+GPHFNP K+HGAP+D RH GDLGNI A D VSI D I L G SI+GR VVVHAD Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_DROMI (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila miranda GN=Sod PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.249e-27 Identity = 61/108 (56.48%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 112 KGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHAD 432 KG++ F Q + V G+ GL GLHGFH+H GD TNGC S+GPHFNP K+HGAP+D RH GDLGNI A D VSI D I L G SI+GR VVVHAD Sbjct: 6 KGTVFFEQETSEAPVKVTGEGLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113 The following BLAST results are available for this feature:
BLAST of CX671688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671688 ID=CX671688; Name=CX671688; organism=Citrus sinensis; type=EST; length=705bpback to top |