CX671688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC4_DICDI (Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium discoideum GN=sodD PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 64/124 (51.61%), Postives = 78/124 (62.90%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDG-VAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ GA V G++ F Q G +V G I+GL GLHGFHIH GDT+NGC S G HFNP +HG P+ RH GDLGNI + P VA V I D +I L G SI+GR +VVH + DDLG G Sbjct: 7 VVKGAV-VNGTIIFSQENEGSPVYVNGTISGLSGGLHGFHIHEFGDTSNGCLSAGAHFNPFHVEHGGPNSAIRHVGDLGNITSCPSSKVANVLIQDNVISLFGDLSIIGRTLVVHENQDDLGLG 129
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 4.242e-26 Identity = 60/124 (48.39%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQ-GPNGVTHVKGKITGLKPGL-HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V G++ F Q + T + ITG GFHIH GD TNGC S GPHFNP K HGAP+D RH GDLGN+ G A+ S+ D + L G HS++GR VV+HA DDLGKG Sbjct: 7 VLRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_PBCV1 (Superoxide dismutase [Cu-Zn] OS=Paramecium bursaria Chlorella virus 1 GN=A245R PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26 Identity = 60/116 (51.72%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 109 VKGSLHFVQGPNGVTHVKGKITGLKPGL-HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 VKG++ FV+ + V + I+GLKP HGFH+H GD T+GC S HFNP HG P RH GDLGNI+A +G A+ S D MI L G+ +I+GRA+VVHAD DDLG G Sbjct: 45 VKGTVRFVEESSKVK-ISVDISGLKPNRKHGFHVHEAGDLTDGCTSACAHFNPFGTAHGGPDSKIRHVGDLGNILADKNGKAKYSFYDSMIKLRGKCNIIGRAIVVHADTDDLGLG 159
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_PODAN (Superoxide dismutase [Cu-Zn] OS=Podospora anserina GN=SOD1 PE=3 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 3.591e-25 Identity = 60/124 (48.39%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGL-HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G + V GS+ F Q NG T + ITG G HIH GD TNGC S GPHFNP K HG +D RH GDLGNI G ++ ++ D +I L G S++GR VVVHA DDLGKG Sbjct: 7 VVRGDSKVSGSVVFEQETENGPTTITWDITGHDANAKRGMHIHTFGDNTNGCTSAGPHFNPHGKTHGNRTDENRHVGDLGNIETDAQGNSKGTVTDNLIKLIGPESVIGRTVVVHAGTDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_ASPOR (Superoxide dismutase [Cu-Zn] OS=Aspergillus oryzae GN=sodC PE=3 SV=3) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 57/125 (45.60%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKGK 456 ++ G + + G++ F Q N T V ITG FH+H GD TNGC S GPHFNP K+HGAP D RH GDLGN +G A S D++I L G S+LGR +V+HA DDLG+ + Sbjct: 7 VLRGDSKISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSE 131
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_ASPFL (Superoxide dismutase [Cu-Zn] OS=Aspergillus flavus GN=sodC PE=3 SV=3) HSP 1 Score: 114.775 bits (286), Expect = 4.690e-25 Identity = 57/124 (45.97%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 91 ISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKGK 456 + G + + G++ F Q N T V ITG FH+H GD TNGC S GPHFNP K+HGAP D RH GDLGN +G A S D++I L G S+LGR +V+HA DDLG+ + Sbjct: 7 VRGDSKISGTVTFEQADANAPTTVSWNITGHDANAERAFHVHQFGDNTNGCTSAGPHFNPFGKEHGAPEDENRHVGDLGNFKTDAEGNAVGSKQDKLIKLIGAESVLGRTLVIHAGTDDLGRSE 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: CCS_PIG (Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25 Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 13 EDPDRESKR*KMETGXXXXXXXXXXLISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ED R++ M +G ++ G+ V+G + F+Q ++G I GLKPGLHG H+H GD T CNS G HFNP HG P D++RH GDLGN+ A DG A + D ++ + ++GR++V+ DDLG+G Sbjct: 67 EDTGRQAVLKGMGSGRWQNLEAAVAILGGSGPVQGVVRFLQLTPERCLIEGTIDGLKPGLHGLHVHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSDRHRGDLGNVCADADGRAVFRMEDELLKV---WDVIGRSLVIDEGEDDLGRG 210
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.365e-24 Identity = 56/124 (45.16%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQ-GPNGVTHVKGKITGLKPGL-HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G + V GS+ F Q + T + I+G G HIH GD TNGC S GPHFNP K HGAP D+ RH GDLGNI +G ++ ++ D + L G S++GR +VVH DDLGKG Sbjct: 7 VVRGDSKVTGSIVFEQESESAPTKITWDISGNDANAKRGMHIHTFGDNTNGCTSAGPHFNPHNKTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVHGGTDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_NEUCR (Superoxide dismutase [Cu-Zn] OS=Neurospora crassa GN=sod-1 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24 Identity = 57/124 (45.97%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQ-GPNGVTHVKGKITGLKPGL-HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G ++VKG++ F Q + T + I+G P GFHIH GD TNGC S GPHFNP HG + RH GDLGNI G A+ ++ D ++ L G S++GR VVVHA DDLGKG Sbjct: 7 VVRGDSNVKGTVIFEQESESAPTTITYDISGNDPNAKRGFHIHTFGDNTNGCTSAGPHFNPHGTTHGDRTAEVRHVGDLGNIETDAQGNAKGTVTDNLVKLIGPESVIGRTVVVHAGTDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_BOTFU (Superoxide dismutase [Cu-Zn] OS=Botryotinia fuckeliana GN=sod1 PE=3 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 6.773e-24 Identity = 57/124 (45.97%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 91 ISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLH-GFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKGK 456 + G + + G++ F Q N T + ITG G H+H GD TNGC S GPHFNP + HGAP+D RH GDLGN G A S+ D I L G S++GR VVVH+ DDLGKG+ Sbjct: 8 VRGDSKISGTVTFEQSEENSPTTITWNITGNDANAERGMHVHQFGDNTNGCTSAGPHFNPHGQTHGAPTDEVRHVGDLGNFKTDAQGNATGSVQDSHIKLIGPLSVIGRTVVVHSGTDDLGKGE 131 The following BLAST results are available for this feature:
BLAST of CX671688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671688 ID=CX671688; Name=CX671688; organism=Citrus sinensis; type=EST; length=705bpback to top |