CX671688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_PAESI (Superoxide dismutase [Cu-Zn] OS=Paecilomyces sinensis GN=SOD1 PE=3 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 56/124 (45.16%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQ-GPNGVTHVKGKITGLKPGL-HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G + + G ++F Q + T + +I+ GFHI GD TNGC S GPHFNP K HG +D RH GD+GNI DG ++ SI D++I L G HS++GR VV+HA DDLGKG Sbjct: 7 VLRGDSKITGIVNFEQESDSSPTTISWEISNHDADAKRGFHITPFGDNTNGCTSAGPHFNPHGKTHGNVTDENRHVGDMGNIETDCDGNSKGSIKDKLIKLIGPHSVIGRTVVIHAGTDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: CCS_MOUSE (Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.155e-23 Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G S++G + F+Q + + ++G I GL+PGLHG H+H GD T CNS G HFNP HG P D +RH GDLGN+ A G A I D+ + + ++GR++V+ DDLG+G Sbjct: 92 ILEGCGSIQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTRDCNSCGDHFNPDGASHGGPQDTDRHRGDLGNVRAEAGGRATFRIEDKQLKV---WDVIGRSLVIDEGEDDLGRG 210
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: CCS_HUMAN (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.574e-23 Identity = 51/122 (41.80%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G +V+G + F+Q ++G I GL+PGLHG H+H GD TN CNS G HFNP HG P D++RH GDLGN+ A DG A + D + + ++GR++++ DDLG+G Sbjct: 92 ILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKV---WDVIGRSLIIDEGEDDLGRG 210
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: CCS_RAT (Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.390e-23 Identity = 51/122 (41.80%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G+ +V+G + F+Q + + ++G I GL+PGLHG H+H GD T C+S G HFNP HG P D +RH GDLGN+ A G A I D+ + + ++GR++VV DDLG+G Sbjct: 92 IMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTKDCSSCGDHFNPDGASHGGPQDTDRHRGDLGNVHAEASGRATFRIEDKQLKV---WDVIGRSLVVDEGEDDLGRG 210
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_SCHPO (Superoxide dismutase [Cu-Zn] OS=Schizosaccharomyces pombe GN=sod1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 196 GFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 GFHIH GD TNGC S GPHFNP K HG + RH GDLGN+ + G + + +D +I L G +SI+GR +V+HA DDLGKG Sbjct: 45 GFHIHQFGDNTNGCTSAGPHFNPEGKTHGDRTAAVRHVGDLGNLESDAQGNIKTTFSDSVISLFGANSIIGRTIVIHAGEDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_LAMCR (Superoxide dismutase [Cu-Zn] (Fragment) OS=Lampanyctus crocodilus GN=sod1 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.561e-20 Identity = 52/124 (41.94%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 88 LISGATS-VKGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G T V G+++F Q + + G+I GL PGLHGFH+HA GD TN H P+D +RH GDLGN VA++ I D+M+ L+G SI+GR +V+H DDLGKG Sbjct: 7 VLKGTTGEVTGTVYFEQESDSAPVKLTGQIIGLAPGLHGFHVHAFGDNTNXXXXXXXXXXXXXXTHAGPTDKDRHVGDLGN-------VAKIDITDKMLTLNGPLSIIGRTMVIHEKADDLGKG 123
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODE_SCHMA (Extracellular superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 44/102 (43.14%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 154 HVKGKITGLKPG-LHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKGK 456 +V G + GL PG L G H+H G N C GPHFNP + HG RH GDLGNI G GVA+ + L +GRA+V+HA+ DDLG+ + Sbjct: 59 YVNGSVAGLPPGKLLGTHVHRYGGLGNMCLEAGPHFNPFNQRHGPRHGYPRHAGDLGNIRVGRGGVAKFDFYVTIKGLGPFDGFIGRALVIHANRDDLGRNR 160
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODE_RAT (Extracellular superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod3 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 45/87 (51.72%), Postives = 51/87 (58.62%), Query Frame = 1 Query: 193 HGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 H H+H GD + GC STGPH+NPL G P + +H GD GN V DG L+G HSILGRAVVVHA DDLGKG Sbjct: 118 HAIHVHEFGDLSQGCESTGPHYNPL----GVP--HPQHPGDFGNFVV-RDGRLWKHRMGLATSLAGPHSILGRAVVVHAGEDDLGKG 197
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODE_HUMAN (Extracellular superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD3 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14 Identity = 42/84 (50.00%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 202 HIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 H+H GD + GC STGPH+NPL H +H GD GN A DG A L+G HSI+GRAVVVHA DDLG+G Sbjct: 114 HVHQFGDLSQGCESTGPHYNPLAVPH------PQHPGDFGNF-AVRDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGRG 190
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODE_MOUSE (Extracellular superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13 Identity = 39/84 (46.43%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 202 HIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 H+H GD + GC+STGPH+NP++ H +H GD GN V +G L+G H+ILGR+VVVHA DDLGKG Sbjct: 128 HVHEFGDLSQGCDSTGPHYNPMEVPH------PQHPGDFGNFVV-RNGQLWRHRVGLTASLAGPHAILGRSVVVHAGEDDLGKG 204 The following BLAST results are available for this feature:
BLAST of CX671688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671688 ID=CX671688; Name=CX671688; organism=Citrus sinensis; type=EST; length=705bpback to top |