CX671688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_CANFA (Superoxide dismutase [Cu-Zn] OS=Canis familiaris GN=SOD1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37 Identity = 72/122 (59.02%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V+G++HFVQ +G V G ITGL G HGFH+H D T GC S GPHFNPL K HG P D ERH GDLGN+ AG DGVA VSI D +I LSG +SI+GR +VVH DDLGKG Sbjct: 8 VLKGQGPVEGTIHFVQKGSGPVVVSGTITGLTEGEHGFHVHQFEDXTQGCTSAGPHFNPLSKKHGGPKDQERHVGDLGNVTAGKDGVAIVSIEDSLIALSGDYSIIGRTMVVHEKRDDLGKG 129
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_ASPJA (Superoxide dismutase [Cu-Zn] (Fragment) OS=Aspergillus japonicus GN=sodC PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37 Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 1 Query: 190 LHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 LHGFH+HALGDTTNGC STGPHFNP K+HGAP D RH GDLGNI AG DGVA V+++D IPL+G HSI+GRAVVVHADPDDLGKG Sbjct: 7 LHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKG 94
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37 Identity = 73/122 (59.84%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G ++V+G + Q +G T V +ITGL PGLHGFH+H GDTTNGC STG HFNP K HGAP D RH GDLGNIVA DGVAEV++ D IPL+G +S++GRA+VVH DDLGKG Sbjct: 71 VLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKG 192
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.976e-37 Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G +SV+G + Q +G T V KITGL PG HGFH+H GDTTNGC STGPHFNP HGAP D RH GDLGNI+A DGVAE +I D IPL+G ++++GRA VVH DDLGKG Sbjct: 74 VLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKG 195
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_HYLLA (Superoxide dismutase [Cu-Zn] OS=Hylobates lar GN=SOD1 PE=2 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37 Identity = 72/123 (58.54%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGP-NGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G + V+G ++F Q NG V G+ITGL GLHGFH+H GD T GC S GPHFNPL + HG P D ERH GDLGN+ A DGVA+VSI D +I LSG HSI+GR +VVH DDLGKG Sbjct: 8 VLKGDSPVQGIINFEQKESNGPVKVYGRITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.111e-37 Identity = 72/122 (59.02%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G ++V+G + Q +G T VK +ITGL PGLHGFH+H GDTTNGC STGPHFNP HGAP D RH GDLGNI A GVAE ++ D IPLSG +S++GRA+VVH DDLGKG Sbjct: 73 VLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKG 194
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_RAT (Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod1 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.554e-36 Identity = 72/123 (58.54%), Postives = 86/123 (69.92%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V+G +HF Q +G V G+ITGL G HGFH+H GD T GC + GPHFNP K HG P+D ERH GDLGN+ AG DGVA VSI DR+I LSG+HSI+GR +VVH DDLGKG Sbjct: 8 VLKGDGPVQGVIHFEQKASGEPVVVSGQITGLTEGEHGFHVHQYGDNTQGCTTAGPHFNPHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKG 130
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.554e-36 Identity = 69/122 (56.56%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G V G++ F Q +G +KG ITGL PG HGFH+HA GD TNGC S GPH+NP K+HG P D ERH GDLGN+ A +GVAE I DR + LSG+ SI+GR +VVH DDLGKG Sbjct: 6 VLKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKG 127
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.462e-36 Identity = 74/122 (60.66%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 88 LISGATSVKGSLHFVQGPNGVTHVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 ++ G + V G + VQ +G T V +ITGL PGLHGFH+H GDTTNGC STG HFNP K HGAP D RH GDLGNIVA DG+AE +I D IPLSG +S++GRA VVH DDLGKG Sbjct: 70 VLKGTSQVDGVVTLVQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGSHFNPNKLTHGAPMDVVRHAGDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKG 191
BLAST of CX671688 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.906e-36 Identity = 70/117 (59.83%), Postives = 84/117 (71.79%), Query Frame = 1 Query: 106 SVKGSLHFVQGPNGV-THVKGKITGLKPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPSDNERHTGDLGNIVAGPDGVAEVSIADRMIPLSGQHSILGRAVVVHADPDDLGKG 453 +V G + F Q G T + G+I GL PGLHGFH+H GDTTNGC S GPHFNP K HG P+D RH GDLGNIVAG DG A + I+D+ + L G +SI+GR++VVHAD DDLGKG Sbjct: 13 NVSGIIRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKG 129 The following BLAST results are available for this feature:
BLAST of CX671688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671688 ID=CX671688; Name=CX671688; organism=Citrus sinensis; type=EST; length=705bpback to top |