CX671674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_GEOUR (Elongation factor Tu OS=Geobacter uraniireducens (strain Rf4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.369e-25 Identity = 78/243 (32.10%), Postives = 118/243 (48.56%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 791 + K H+NI IGHVD GK+T T + L G + + F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P + + EGD + L L++A+D+ I EP R DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLAGKGQAEFKAFDQ---------------IDNAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIIKGSALKALEGD-----TGELGEQAIMKLMEAVDSYIPEPVRAIDKPFLMPVEDV 220
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_FRAAA (Elongation factor Tu OS=Frankia alni (strain ACN14a) GN=tuf PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.369e-25 Identity = 80/246 (32.52%), Postives = 119/246 (48.37%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDV 791 + K H+NI IGH+D GK+T T + L A + F +DK E+ RGITI IA +++T K + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + VP + +S EGD +W G LL+ + D+I EP+R D+P +P++DV Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTAAITKVL-------------HDAHPDLNPFTPFDQIDKAPEEKARGITISIAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSSYEFPGDDVPVIRVSALKALEGDK--------EW--GAKLLELMAAVDDSIPEPQRDIDRPFLMPIEDV 220
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_ARATH (Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.369e-25 Identity = 79/247 (31.98%), Postives = 122/247 (49.39%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV------PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 791 ++K H+NI IGHVD GK+T T L L I V +++++ +D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G QT+EH LLA +GV M+ NK D + A E+V+ EV L +N + +P + + + ++R N K L+DA+D+ I P+R ++ P L ++DV Sbjct: 75 RKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMVVFLNKED----QVDDAELLELVELEVRELLSSYEFNGDDIPIISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDV 295
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_SYNFM (Elongation factor Tu OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tuf1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25 Identity = 79/244 (32.38%), Postives = 123/244 (50.41%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDV 791 + K H+N+ +GH+D GK+T T I K++ +R E ++ +DK ERERGITI A ++ET K + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LL+ +GV ++ NK+D E+V+ E+ L K G+ + VP + + E D+ T + L++A+D + +P R DKP +P++DV Sbjct: 8 RTKPHVNVGTVGHIDHGKTTLTA-------AITKQLAKRGRAEFVPFDQ--------IDKAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAADDGPMP-------QTREHILLSRQVGVPYIVVFLNKVDMV----DDPELIELVELELRELLSKYGFPGDDVPIIKGSALRALEADDPEHPDTKCIF----ELMEAIDAYVPDPVRDIDKPFLMPIEDV 221
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_STIAU (Elongation factor Tu OS=Stigmatella aurantiaca GN=tuf PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25 Identity = 78/243 (32.10%), Postives = 121/243 (49.79%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 791 + K H+NI IGHVD GK++ T + K A+ +F +DK ERERGITI A +++T + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + EV LKK + + +P +P + EGD ++++ L+ A+D I P+R +DKP +P++DV Sbjct: 8 RNKPHVNIGTIGHVDHGKTSLTAAIT---------------KVLAKTGGATFLAYDQIDKAPEERERGITISTAHVEYQTKNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMLDDPELR---ELVEMEVRDLLKKYEFPGDSIPIIPGSALKALEGD-----TSDIGEGAILKLMAAVDEYIPTPQRATDKPFLMPVEDV 220
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_RICPR (Elongation factor Tu OS=Rickettsia prowazekii GN=tuf PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25 Identity = 78/246 (31.71%), Postives = 120/246 (48.78%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 791 + K H+NI IGHVD GK++ T + + K GG ++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK+D + + EV L K G+ ++P + + EG E++ N L++A+D+ I +P R +DKP +P++DV Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITIILAKTGGAKATAYDQ------------------IDAAPEEKERGITISTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPAMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYGFPGNEIPIIKGSALQALEGKPEGEKAIN-------ELMNAVDSYIPQPIRATDKPFLMPIEDV 218
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25 Identity = 76/243 (31.28%), Postives = 124/243 (51.03%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDV 791 + K H+NI IGH+D GK+T T I K + +++ + F +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + + + +P V ++ F + N D G ++L+ ++ ++E P+R ++KP +P++DV Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDKYP------DLNPFTPFDEIDKAPEERQRGITISIAHVEYQTESRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPALVVALNKCDMVD---DEELIELVEMEVRELLSEYEFPGDDIPVVRVAAFP-------ALNGDAKWGESVLELMNAVDEYIPTPERDTEKPFLMPVEDV 220
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_DESVM (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tuf PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25 Identity = 84/247 (34.01%), Postives = 119/247 (48.18%), Query Frame = 3 Query: 69 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 791 MGKEK H+NI IGH+D GK+T T I K+ G+ F +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ + +P + S + + + D LLDA D+ I EP+R DKP +P++DV Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTA-AITKVAGL--------------RGNGKFVAFDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPYLVVFLNKCDMVD---DEELLELVELEVRELLSLYGFPGDDIPVIRGSALKALE-TDDPNSADAAPVVALLDACDSYIPEPQRDIDKPFLMPIEDV 221
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25 Identity = 82/245 (33.47%), Postives = 120/245 (48.98%), Query Frame = 3 Query: 81 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDV 791 K H+NI IGHVD GK+T T + L K ++++ +D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK D + A E+V+ EV L K + +++PFV S + + L W K L+DA+D I P+RP DK + ++DV Sbjct: 10 KPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNMVVFLNKED----QIDDADLLELVELEVRELLSKYDFPGDQIPFVSGSALLALESLSSNPKLMRGEDKWVDKILALMDAVDEYIPTPERPIDKSFLMAIEDV 228
BLAST of CX671674 vs. ExPASy Swiss-Prot
Match: EFTU2_STRAW (Elongation factor Tu 2 OS=Streptomyces avermitilis GN=tuf2 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.624e-25 Identity = 83/247 (33.60%), Postives = 120/247 (48.58%), Query Frame = 3 Query: 63 TAMGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDV 791 TA + K H+NI +GHVD GK+T T + K AE +F +D+ E RGITI+IA ++ET + +D PGH D++KNM+TG +Q D A+L++ + G QT EH LLA +GV ++ NK DA + + D + EV L GY + VP V +SG EGD + + LLDA+D + P+R D P LP+++V Sbjct: 4 TAYVRTKPHLNIGTMGHVDHGKTTLTAAIT---------------KVLAERGSGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDSVPVVRVSGLKALEGDPRWTAAID-------ALLDAVDTYVPMPERYVDAPFLLPVENV 217 The following BLAST results are available for this feature:
BLAST of CX671674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671674 ID=CX671674; Name=CX671674; organism=Citrus sinensis; type=EST; length=791bpback to top |