CX671673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.984e-38 Identity = 75/154 (48.70%), Postives = 104/154 (67.53%), Query Frame = -1 Query: 397 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 858 S+EMHHE LQ+A PGDN+GFNV+ +A D+KRG V + D P FT+Q++++NHP I GY PV HT+ +A K E+V ++ + G L+ +P F+K GD +VK+IP KP+V+E S+ P LGRFAVRDM QTVA G ++EK+ Sbjct: 272 SIEMHHEPLQQAEPGDNIGFNVRGIAKNDIKRGDVCGHL-DSPPTVVRAFTAQIVVLNHPSVIAPGYKPVFHVHTAQVACKIDEIVRTLNPKDGTTLKDKPDFIKTGDIAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.984e-38 Identity = 73/152 (48.03%), Postives = 108/152 (71.05%), Query Frame = -1 Query: 403 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 858 S+EMHHE +++A+PGDN+GFNV+ V+ D+KRG VA + ++ P A FT++V ++ HP I GY PV+ HT+ +A + E+ KID R+GK +E+ P FLK GDA +V P KPMV+E F ++ PLGRFA+RDM +TV +G++ +V+ Sbjct: 282 SIEMHHEKIEQAMPGDNIGFNVRGVSKNDIKRGDVAGHPENPPT-VADQFTARVFVIWHPSAIAVGYTPVIHAHTASVASRIIEIKQKIDPRTGKVIEENPSFLKPGDAAVVVFKPLKPMVIEKFQEFQPLGRFAMRDMGKTVGIGIVTDVK 432
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.897e-38 Identity = 73/155 (47.10%), Postives = 108/155 (69.68%), Query Frame = -1 Query: 394 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 858 S+E HH LQEA+PGDN+GFNVK V L+RG VA ++ + P A FT ++ ++ HP I GY PVL HT+ + V F EL+ K+D R+G E++P+++K GD+ +V+ P KP+VVE +S++PPLGRFA+RD +T+A GV+ +V+K + Sbjct: 278 SIETHHTPLQEAIPGDNIGFNVKGVEKSQLRRGDVAGHTTNPPT-VAEEFTGRIFVLYHPTAIAAGYTPVLHIHTATVPVTFEELLQKLDPRTGSVAEEKPQYIKQGDSAIVRFKPRKPVVVEKYSEFPPLGRFAIRDSGRTIAAGVVIDVKKAE 431
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.090e-38 Identity = 76/154 (49.35%), Postives = 103/154 (66.88%), Query Frame = -1 Query: 397 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 858 S+EMHHE + +A+PGDNVGFNV+ +A D++RG V ++ P A FT+QV+++ HP I GY PV CHT+ A F EL K+D RSG+ E+ P FLK GDA +V++ PTKPMV+E + P LGRFAVRDM T+A G+ ++ K Sbjct: 270 SIEMHHEEIPQAVPGDNVGFNVRGIAKGDIRRGDVCGPAEQPPT-VADEFTAQVVVLQHPSAITVGYTPVFHCHTTQTACTFIELKKKLDPRSGQTKEENPTFLKTGDAAIVQIKPTKPMVIENVKELPQLGRFAVRDMGSTIAAGMCIAIQPK 422
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 78/154 (50.65%), Postives = 108/154 (70.13%), Query Frame = -1 Query: 397 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 858 S+E HH + +A PGDN+GFNV+ V KD+KRG VA S +P A FT+QVI++ HP +G GY PVL HT+ IA + SE+ ++ID ++GKE EK P+F+K GD+ +VK P K +V E F ++P LGRFA+RDM +TV VGVI +V+ + Sbjct: 278 SIETHHTKIDKAEPGDNIGFNVRGVEKKDVKRGDVAG-SVQNPPTVADEFTAQVIVIWHPTAVGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDVKPR 430
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 76/155 (49.03%), Postives = 106/155 (68.39%), Query Frame = -1 Query: 394 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 858 +VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A +FT+Q++++ HP + GY PV HT+ IA F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 274 TVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VATDFTAQIVVLQHPSVLTVGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = -1 Query: 406 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 858 S+EMHHE + A PGDN+GFNV+ V D++RG VA + D PA A F +Q++++ HPG I GY PV CHTS +A F EL K+D +G+ E+ P FLK G+A VK+ PTKPMV+E P +GRFA+RDM QTVA G+ +V Sbjct: 260 SIEMHHETFETAEPGDNIGFNVRGVGKNDIRRGDVAGHVDDAPA-VAKEFDAQIVVLQHPGVITVGYTPVFHCHTSQVACTFLELTAKLDPATGQVAEENPDFLKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRDMGQTVAAGLCIDV 409
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = -1 Query: 448 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 858 SVEMHHE L++A PGDNVGFNV+ +AVKDLK+G+V + +DP +FT+QVI+MNHP +I GY PV+DCHT+HIA +F + K+D+R+ K + P GD +VKM+P KP+ ETF+DY PLG FAVR Sbjct: 260 SVEMHHEELKKAGPGDNVGFNVRGLAVKDLKKGYVVGDVTNDPPVGCKSFTAQVIVMNHPKKIQPGYTPVIDCHTAHIACQFQLFLQKLDKRTLKPEMENPPDAGRGDCIIVKMVPQKPLCCETFNDYAPLGPFAVR 396
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.647e-38 Identity = 74/152 (48.68%), Postives = 106/152 (69.74%), Query Frame = -1 Query: 403 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 858 ++E HH +++A PGDN+GFNVK V KD+KRG VA S D P A FT+++++M HP I GY PV+ HT+ +A + +E++ KID R+GKE+EK P FLK GD +VK P KP+VVE +SD+ LGRFA+RDM +T+ +G + ++ Sbjct: 280 TIETHHTKIEKAEPGDNIGFNVKGVEKKDIKRGDVAG-SLDVPPTVADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIK 430
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.134e-37 Identity = 76/155 (49.03%), Postives = 106/155 (68.39%), Query Frame = -1 Query: 394 SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 858 +VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P AA+FT+Q++++ HP + GY PV HT+ IA F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 274 TVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 The following BLAST results are available for this feature:
BLAST of CX671673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671673 ID=CX671673; Name=CX671673; organism=Citrus sinensis; type=EST; length=858bpback to top |