CX671673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.322e-13 Identity = 44/145 (30.34%), Postives = 78/145 (53.79%), Query Frame = -1 Query: 406 EALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 840 E + ++ GD V V+ D++ G+V +++K+ P F +Q+ I+ P + GY+ V+ HT+ V F++L+ K+D+ + K +K P F G + ++ P+ +E F DY +GRF +RD TVAVG + + Sbjct: 519 EEISSSICGDQVRLRVRGDD-SDVQTGYVLTSTKN-PVHATTRFIAQIAILELPSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRKS-KKPPMFATKGMKIIAELETQTPVCMERFEDYQYMGRFTLRDQGTTVAVGKVVKI 660
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.396e-11 Identity = 37/152 (24.34%), Postives = 76/152 (50.00%), Query Frame = -1 Query: 400 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 855 + +H E + A GD+V + + + + G + K+ P + F ++++I N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R TVA GV+ +++ Sbjct: 529 ITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILIFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEIKE 679
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11 Identity = 36/152 (23.68%), Postives = 76/152 (50.00%), Query Frame = -1 Query: 400 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 855 + +H E + A GD+V + + + + G + K+ P + F +++++ N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R TVA GV+ +++ Sbjct: 532 ITLHDEPVDWAAAGDHVNLTLVGMDIIKINVGCIFCGPKE-PIKACTRFRARILVFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYGGSTVAAGVVTEIKE 682
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.823e-11 Identity = 37/152 (24.34%), Postives = 76/152 (50.00%), Query Frame = -1 Query: 400 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 855 + +H E + A GD+V + + + + G + K P + F ++++I N I G+ +L T L++ +++ +G+ +K+PKFL G +V++ +P+ +E + D+ LGRF +R T+A GV+ +++ Sbjct: 534 ITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEIKE 684
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 37/152 (24.34%), Postives = 76/152 (50.00%), Query Frame = -1 Query: 400 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 855 + +H E + A GD+V + + + + G + K P + F ++++I N I G+ +L T L++ +++ +G+ +K+PKFL G +V++ +P+ +E + D+ LGRF +R T+A GV+ +++ Sbjct: 534 ITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKV-PIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFKELGRFMLRYGGSTIAAGVVTEMKE 684
BLAST of CX671673 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11 Identity = 36/151 (23.84%), Postives = 75/151 (49.67%), Query Frame = -1 Query: 403 VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 855 + +H E + A GD+V + + + + G + K+ P + F ++++I N I G+ +L T L++ +++ +G+ +K+PK L G +V++ +P+ +E + D+ LGRF +R T+A GV+ ++ Sbjct: 536 ITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKE-PIKVCTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIK 685 The following BLAST results are available for this feature:
BLAST of CX671673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671673 ID=CX671673; Name=CX671673; organism=Citrus sinensis; type=EST; length=858bpback to top |