CX671670

Overview
NameCX671670
Unique NameCX671670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5082 contig Csv1_Contig5082:380..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 62/237 (26.16%), Postives = 117/237 (49.37%), Query Frame = 3
Query:  156 LGSGAVKKVYRA-FDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIIS-LHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHV-----SVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGK---SHSAHSMLGTPEFMAPELY----DEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIK 824
            +GSG+   VY+  +  +  +++      L      P  ++   +EV +L+   + NI+  + Y  + +    L  +T+ C   +L      H H+      +  L   ++Q  +G++YLH     +IHRDL  +N+F++ +   VKIGD G+A +  +   SH    + G+  +MAPE+        Y+   D+Y+FG+ + E++T ++PYS  +N  +I   V  G     L+K++
Sbjct:  463 IGSGSFGTVYKGKWHGDVAVKM------LNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ----LAIVTQWCEGSSLYH----HLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 682          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 62/237 (26.16%), Postives = 117/237 (49.37%), Query Frame = 3
Query:  156 LGSGAVKKVYRA-FDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIIS-LHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHV-----SVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGK---SHSAHSMLGTPEFMAPELY----DEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIK 824
            +GSG+   VY+  +  +  +++      L      P  ++   +EV +L+   + NI+  + Y  + +    L  +T+ C   +L      H H+      +  L   ++Q  +G++YLH     +IHRDL  +N+F++ +   VKIGD G+A +  +   SH    + G+  +MAPE+        Y+   D+Y+FG+ + E++T ++PYS  +N  +I   V  G     L+K++
Sbjct:  503 IGSGSFGTVYKGKWHGDVAVKM------LNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ----LAIVTQWCEGSSLYH----HLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 722          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 62/237 (26.16%), Postives = 117/237 (49.37%), Query Frame = 3
Query:  156 LGSGAVKKVYRA-FDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIIS-LHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHV-----SVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGK---SHSAHSMLGTPEFMAPELY----DEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIK 824
            +GSG+   VY+  +  +  +++      L      P  ++   +EV +L+   + NI+  + Y  + +    L  +T+ C   +L      H H+      +  L   ++Q  +G++YLH     +IHRDL  +N+F++ +   VKIGD G+A +  +   SH    + G+  +MAPE+        Y+   D+Y+FG+ + E++T ++PYS  +N  +I   V  G     L+K++
Sbjct:  503 IGSGSFGTVYKGKWHGDVAVKM------LNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ----LAIVTQWCEGSSLYH----HLHIIETKFEMIKLIDIARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVR 722          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: AKT2A_XENLA (RAC-beta serine/threonine-protein kinase A OS=Xenopus laevis GN=akt2-A PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 56/208 (26.92%), Postives = 99/208 (47.60%), Query Frame = 3
Query:  144 YNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI-VGKSHSAHSMLGTPEFMAPE-LYDEDYTELVDIYSFGMCVLEMVTLEIPYSECDN 761
            Y +LLG G   KV    ++  G   A   ++         +   L +E R+L+   +  + +L Y ++  DR  L F+ E    G L  +  + R  +    + +  +I+  L YLH+    V++RD+   N+ ++ + G VKI D G+    +    +  +  GTPE++APE L D DY   VD +  G+ + EM+   +P+   D+
Sbjct:  159 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTL-TESRVLQNTKHPFLTALKYAFQTSDR--LCFVMEYANGGELFFHLSRERVFTEDRARFYGAEIVSALEYLHSRN--VVYRDIKLENLMLDKD-GHVKITDFGLCKEGITDGATMRTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 360          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.381e-13
Identity = 61/228 (26.75%), Postives = 112/228 (49.12%), Query Frame = 3
Query:  132 RYGRY--NELLGSGAVKKVYRAFDQEEGIEVA---WNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSMLGTPEFMAPELYDEDY--TELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSG 794
            R G Y   + LG G   KV     +  G +VA    N+ K+R+      ++ ++  E++ LK   + +II L+ V      + +  + E  + G L +Y  K+  +  K  ++  +QIL G++Y H H   V+HRDL   NV ++ +    KI D G++ ++       +  G+P + APE+          VDI+S G+ +  ++   +P+ + D+V  ++KK+  G
Sbjct:   18 RIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSL----DVVGKIRREIQNLKLFRHPHIIKLYQVISTP--SDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH--MVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDG 235          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 68/241 (28.22%), Postives = 115/241 (47.72%), Query Frame = 3
Query:  153 LLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQI--LKG----LNYLH-THEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSML-GTPEFMAPEL-YDEDYTELVDIYSFGMCVLEMVTLEIP-------YSECDNVAKIYKKVSSGQRPDALNKIKD 827
            L+G+G   KVY+A      + V        +   +P+  +   +E+R L  + ++N++ L + +    RNT   + E    G+LR+  +       K L  W K+I  +KG    L+Y+H    P ++HRD++  N+ + G   + KI D G A ++    S  S + GT  ++APEL Y    TE  D+YSFG+  LE++  E P        S   +     K +S  + P+   +IK+
Sbjct:  780 LIGTGGHGKVYKAKLPNAIMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKL-FGFCSHRRNTF-LVYEYMERGSLRKVLENDDEA--KKLD-WGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILL-GEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKE 1014          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 62/204 (30.39%), Postives = 104/204 (50.98%), Query Frame = 3
Query:  144 YNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSK---QILKGLNYLHTH-EPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA---IVGKSHSAHSMLGTPEFMAPELYDEDY-TELVDIYSFGMCVLEMVT 731
            +  +LG G    VY      +G EVA   VK+ +        E   +EV LL  + +++++ L  V   +D + L  I E   +G+LRE     R  +V   +   +   +  +GL YLH    P ++HRD+  +N+ +N   G  K+ D G++    I G+ H +  + GTP ++ PE Y  ++ +E  D+YSFG+ +LE+VT
Sbjct:  586 FERVLGKGGFGTVYHG--NLDGAEVA---VKMLSHSSAQGYKE-FKAEVELLLRVHHRHLVGL--VGYCDDGDNLALIYEYMANGDLRENMSGKRGGNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCG-AKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVT 780          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: ULK2_HUMAN (Serine/threonine-protein kinase ULK2 OS=Homo sapiens GN=ULK2 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 53/209 (25.36%), Postives = 103/209 (49.28%), Query Frame = 3
Query:  150 ELLGSGAVKKVYRA-FDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNTLNFITEVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQ--------VKIGDLGVAAIVGKSHSAHSMLGTPEFMAPE-LYDEDYTELVDIYSFGMCVLEMVTLEIPY 746
            +L+G GA   V+R    Q+   EVA   +  +       ++ +   E+++LK L ++NI++L+ V   E  N++  + E C  G+L +Y +    +S   ++ +  QI   +  LH+    +IHRDL   N+ ++    +        +KI D G A  +  +  A ++ G+P +MAPE +  + Y    D++S G  + + +  + P+
Sbjct:   13 DLVGHGAFAVVFRGRHRQKTDWEVAIKSINKKNLSKSQILLGK---EIKILKELQHENIVALYDV--QELPNSVFLVMEYCNGGDLADYLQAKGTLSEDTIRVFLHQIAAAMRILHSKG--IIHRDLKPQNILLSYANRRKSSVSGIRIKIADFGFARYLHSNMMAATLCGSPMYMAPEVIMSQHYDAKADLWSIGTVIYQCLVGKPPF 214          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: STK4_XENTR (Serine/threonine-protein kinase 4 OS=Xenopus tropicalis GN=stk4 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 57/213 (26.76%), Postives = 104/213 (48.83%), Query Frame = 3
Query:  150 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLHYVWRDEDRNT-LNFITEVCTSGNLREY-RKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAA-IVGKSHSAHSMLGTPEFMAPELYDE-DYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIY 776
            E LG G+   VY+A  +E    VA  Q+ + +       ++ +  E+ +++   + +++  +  +    +NT L  + E C  G++ +  R + + +         +  LKGL YLH      IHRD+   N+ +N   G  K+ D GVA  +       ++++GTP +MAPE+  E  Y  + DI+S G+  +EM   + PY+E   +  I+
Sbjct:   34 EKLGEGSYGSVYKASHKETSQIVAIKQIPVESD------LQEIIKEIAIMQQCDSLHVVKYYGSYF---KNTDLWIVMEFCGGGSISDIIRLRKQTLKEDETATILQSTLKGLEYLHFMRK--IHRDIKAGNILLNSE-GTAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAEIHPMRAIF 234          
BLAST of CX671670 vs. ExPASy Swiss-Prot
Match: STK39_RAT (STE20/SPS1-related proline-alanine-rich protein kinase OS=Rattus norvegicus GN=Stk39 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.225e-12
Identity = 59/217 (27.19%), Postives = 111/217 (51.15%), Query Frame = 3
Query:  150 ELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRTFCDDPAMIERLFSEVRLLKTLANKNIISLH--YVWRDEDRNTLNFITEVCTSGNLREY------RKKHRH--VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI------VGKSHSAHSMLGTPEFMAPELYDE--DYTELVDIYSFGMCVLEMVTLEIPY 746
            E++GSGA   V  A  +     VA  ++ L   C     ++ L  E++ +   ++ N+++ +  +V +DE    L  + ++ + G++ +       R +H++  +    +    K++L+GL+YLH +    IHRDL   N+ + G  G V+I D GV+A       V ++    + +GTP +MAPE+ ++   Y    D++SFG+  +E+ T   PY
Sbjct:   76 EVIGSGATAVVQAALCKPRQERVAIKRINLEK-CQ--TSMDELLKEIQAMSQCSHPNVVTYYTSFVVKDE----LWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQ--IHRDLKAGNILL-GEDGSVQIADFGVSAFLATGGDVTRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADMWSFGITAIELATGAAPY 282          
The following BLAST results are available for this feature:
BLAST of CX671670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRAF1_HUMAN9.381e-1326.16B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_COTJA9.381e-1326.16B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK9.381e-1326.16B-Raf proto-oncogene serine/threonine-protein kina... [more]
AKT2A_XENLA9.381e-1326.92RAC-beta serine/threonine-protein kinase A OS=Xeno... [more]
AAPK1_PONAB9.381e-1326.755'-AMP-activated protein kinase catalytic subunit ... [more]
Y4885_ARATH1.225e-1228.22Probable LRR receptor-like serine/threonine-protei... [more]
Y1518_ARATH1.225e-1230.39Probable LRR receptor-like serine/threonine-protei... [more]
ULK2_HUMAN1.225e-1225.36Serine/threonine-protein kinase ULK2 OS=Homo sapie... [more]
STK4_XENTR1.225e-1226.76Serine/threonine-protein kinase 4 OS=Xenopus tropi... [more]
STK39_RAT1.225e-1227.19STE20/SPS1-related proline-alanine-rich protein ki... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D11-H22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671670 ID=CX671670; Name=CX671670; organism=Citrus sinensis; type=EST; length=847bp
CTGTGAACTGCTTTTTCGCAAATAAAGCTTCCGCTTCTCCATTCTTTATT
TGCTTTTTCATGATGCCGGCTGTTAACTCGGATCCATCCGACAAAGACTC
CGAGCCGTTTATAGAGACCGACCCCACCGGCCGATACGGCCGATACAACG
AACTACTTGGCTCCGGCGCCGTGAAGAAAGTGTACCGAGCATTTGATCAA
GAAGAGGGCATAGAAGTTGCATGGAATCAAGTGAAGCTAAGAACCTTCTG
CGACGATCCGGCGATGATCGAAAGGCTCTTCTCGGAAGTCCGTTTGCTGA
AAACCCTAGCCAACAAGAACATAATCTCCTTGCACTACGTGTGGCGCGAC
GAGGATCGCAACACATTGAATTTCATCACCGAAGTCTGCACTTCCGGTAA
CTTGAGAGAGTACCGGAAAAAGCACCGGCATGTTTCCGTGAAGGCGCTCA
AGAAATGGTCAAAGCAAATCTTGAAGGGGTTGAATTATTTGCACACGCAC
GAGCCTTGTGTCATTCATAGGGATCTCAATTGTAGCAACGTTTTCGTCAA
CGGAAACACTGGCCAGGTTAAGATCGGTGATCTCGGGGTGGCGGCGATAG
TGGGAAAGAGCCATTCGGCGCATTCGATGCTGGGGACGCCGGAGTTCATG
GCGCCGGAGCTGTACGATGAGGATTACACGGAGCTTGTGGACATATACTC
GTTTGGGATGTGCGTGCTAGAGATGGTGACGTTGGAGATACCTTACAGCG
AATGCGACAATGTGGCCAAAATTTACAAGAAGGTGTCGTCTGGGCAGAGG
CCTGATGCATTGAACAAGATTAAGGATCCAGAGGTAAAGGAGTTCAT
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