CX671669

Overview
NameCX671669
Unique NameCX671669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5082 contig Csv1_Contig5082:1..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: NRBP_DROME (Nuclear receptor-binding protein homolog OS=Drosophila melanogaster GN=Madm PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 61/187 (32.62%), Postives = 99/187 (52.94%), Query Frame = -2
Query:  318 EVCTSGNLREYRKKHRH----VSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAI-----VGKSHSAHSMLGTPEFMAPELYDED-YTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIKDPEVKEFIERCL-AQPRARPSAAELLKDP 845
            E  +SG+L+++ K+ +     + +++ ++W  QIL  L+YLH+  P +IH +L C ++F+  N G VKIG +   A+      G+        G   F APE    D  T  +DIY+FGMC LEM  LEI  S  ++ A     ++       +  +++   ++ I +CL  QP+ RPSA +LL  P
Sbjct:  193 EYMSSGSLKQFLKRTKRNAKRLPLESWRRWCTQILSALSYLHSCSPPIIHGNLTCDSIFIQHN-GLVKIGSVVPDAVHYSVRRGRERERERERGAHYFQAPEYGAADQLTAALDIYAFGMCALEMAALEIQPSNSESTA-----INEETIQRTIFSLENDLQRDLIRKCLNPQPQDRPSANDLLFHP 373          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: NEK2_ARATH (Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana GN=NEK2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = -2
Query:  318 CTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSMLGTPEFMAPELY-DEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSS--GQRPDALNKIKDPEVKEFIERCLAQPRARPSAAELLKDP 839
            C  G++ E  KK    H + + L KW  QIL  L YLH +   ++HRD+ CSN+F+  +   +++GD G+A ++     A S++GTP +M PEL  D  Y    DI+S G C+ EM  ++  +   D    I +   S     P   +      VK  + +    P  RPSAAELL+ P
Sbjct:   84 CKGGDMAEAIKKTNGVHFTEEKLCKWLVQILLALEYLHANH--ILHRDVKCSNIFLTKDQ-DIRLGDFGLAKVLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCMYEMTAMKPAFKAFDMQGLINRINRSIVPPLPAQYSAAFRGLVKSMLRK---NPELRPSAAELLRQP 256          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 62/175 (35.43%), Postives = 93/175 (53.14%), Query Frame = -2
Query:  327 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSMLGTPEFMAPELY-DEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIKDPEVKEFIERCL-AQPRARPSAAELL 845
            E C  G L E  +  R V+   L  WS  I  G+NYLH H+  +IHRDL   N+ +  +   VKI D G +  +    +  S  GT  +MAPE+  +E  +E VDI+SFG+ + E++T EIPY + D+ A I+   S+       +   D   K  + +C  ++PR RPS  ++L
Sbjct:  224 EFCAQGQLYEVLRAGRPVTPSLLVDWSMGIAGGMNYLHLHK--IIHRDLKSPNMLITYDD-VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPD-GFKILLRQCWNSKPRNRPSFRQIL 394          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: M3K12_HUMAN (Mitogen-activated protein kinase kinase kinase 12 OS=Homo sapiens GN=MAP3K12 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 62/175 (35.43%), Postives = 93/175 (53.14%), Query Frame = -2
Query:  327 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSMLGTPEFMAPELY-DEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIKDPEVKEFIERCL-AQPRARPSAAELL 845
            E C  G L E  +  R V+   L  WS  I  G+NYLH H+  +IHRDL   N+ +  +   VKI D G +  +    +  S  GT  +MAPE+  +E  +E VDI+SFG+ + E++T EIPY + D+ A I+   S+       +   D   K  + +C  ++PR RPS  ++L
Sbjct:  191 EFCAQGQLYEVLRAGRPVTPSLLVDWSMGIAGGMNYLHLHK--IIHRDLKSPNMLITYDD-VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPD-GFKILLRQCWNSKPRNRPSFRQIL 361          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: M2K1_ORYSJ (Mitogen-activated protein kinase kinase 1 OS=Oryza sativa subsp. japonica GN=MEK1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 70/193 (36.27%), Postives = 96/193 (49.74%), Query Frame = -2
Query:  291 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAH-SMLGTPEFMAPE-LYDEDYTELVDIYSFGMCVLEMVTLEIPY--SECDNVAKIY---KKVSSGQRPDALNKIKDPEVKEFIERCLAQ-PRARPSAAELLKDPFFDGIEDDD 845
            E    G+L +  K+ + +    L    KQ+L+GL YLH HE  VIHRD+  SN+ VN   G+VKI D GV+A++  S     + +GT  +MAPE +    Y    DI+S G+ +LE      PY  SE +     Y   + +     P A      PE   FI  C+ + P  R SA+ELL  PF    ED D
Sbjct:  147 EYMDRGSLADIIKQVKTILEPYLAVLCKQVLEGLLYLH-HERHVIHRDIKPSNLLVN-RKGEVKITDFGVSAVLASSMGQRDTFVGTYNYMAPERISGSSYDYKSDIWSLGLVILECAIGRFPYIPSEGEGWLSFYELLEAIVDQPPPSAPADQFSPEFCAFISSCIQKDPAERMSASELLNHPFIKKFEDKD 337          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: M3K4_HUMAN (Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 62/195 (31.79%), Postives = 103/195 (52.82%), Query Frame = -2
Query:  291 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSA-----HSMLGTPEFMAPELYD----EDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIKDPEVKEFIERCL-AQPRARPSAAELLKDPFFDGIEDDD 845
            E C  G L E  +      V  ++ +SKQI   +N LH H   ++HRD+  +N+F+  ++G +K+GD G +  +  +        +S LGT  +MAPE+      E +    DI+S G  V+EMVT + P+ E ++  +I  KV  G +P    ++  PE K+F+  CL + P+ R +A++LL   F     D++
Sbjct: 1419 EYCDEGTLEEVSRLGLQEHV--IRLYSKQITIAINVLHEHG--IVHRDIKGANIFLT-SSGLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERL-SPEGKDFLSHCLESDPKMRWTASQLLDHSFVKVCTDEE 1607          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 62/175 (35.43%), Postives = 92/175 (52.57%), Query Frame = -2
Query:  327 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSMLGTPEFMAPELY-DEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIKDPEVKEFIERCL-AQPRARPSAAELL 845
            E C  G L E  +  R V+   L  WS  I  G+NYLH H+  +IHRDL   N+ +  +   VKI D G +  +    +  S  GT  +MAPE+  +E  +E VDI+SFG+ + E++T EIPY + D+ A I+   S+       +   D   K  + +C   +PR RPS  ++L
Sbjct:  224 EFCAQGQLYEVLRAGRPVTPSLLVDWSMGIAGGMNYLHLHK--IIHRDLKSPNMLITYDD-VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPD-GFKILLRQCWNRKPRNRPSFRQIL 394          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: M2K2_ARATH (Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana GN=MKK2 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 61/188 (32.45%), Postives = 102/188 (54.26%), Query Frame = -2
Query:  309 EVCTSGNLREYRKKHRHVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHS-AHSMLGTPEFMAPE-LYDEDYTELVDIYSFGMCVLEMVTLEIPYSECD------NVAKIYKKVSSGQRPDALNKIKDPEVKEFIERCLAQ-PRARPSAAELLKDPFFD 845
            E    G+L ++ K  + +    L    +Q+L+GL YLH H+  +IHRDL  SN+ +N + G+VKI D GV+ ++  +   A++ +GT  +M+PE +    Y    DI+S G+ VLE  T + PY+  +      +V ++ + +     P   +    PE+  FI  CL + P +R SA EL++ PF +
Sbjct:  146 EYMDGGSLADFLKSVKAIPDSYLSAIFRQVLQGLIYLH-HDRHIIHRDLKPSNLLIN-HRGEVKITDFGVSTVMTNTAGLANTFVGTYNYMSPERIVGNKYGNKSDIWSLGLVVLECATGKFPYAPPNQEETWTSVFELMEAIVDQPPPALPSGNFSPELSSFISTCLQKDPNSRSSAKELMEHPFLN 331          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: PAKH_DICDI (Serine/threonine-protein kinase pakH OS=Dictyostelium discoideum GN=pakH-1 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 58/167 (34.73%), Postives = 93/167 (55.69%), Query Frame = -2
Query:  279 KQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSMLGTPEFMAPELYDE-DYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIK---DPEVKEFIERCLAQP-RARPSAAELLKDPFFDGIEDDDENDL 764
            +Q L GL YLH+ +  +IHRD+  +N+ ++  TGQVKI D GV+  +  + S  S+ GTP +MAPE+ ++ DY   +D++S G+  +E+   E P SE + +  +Y     G+RP    K      PE   F+++CL +    R S ++LL  PF    + D   +L
Sbjct:  145 QQSLLGLVYLHSKQ--IIHRDIKSANILLD-ETGQVKIADFGVSQQIQSTFSKGSIAGTPYWMAPEILNQTDYNNKIDVWSLGIVAIELADGEPPLSEVNPMRAMY---MIGRRPPPTFKDPKKWSPEFVSFVDKCLTKDINERWSPSQLLDHPFIKSAKPDALKEL 305          
BLAST of CX671669 vs. ExPASy Swiss-Prot
Match: NEK5_ORYSJ (Serine/threonine-protein kinase Nek5 OS=Oryza sativa subsp. japonica GN=NEK5 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 60/179 (33.52%), Postives = 91/179 (50.84%), Query Frame = -2
Query:  315 CTSGNLREYRKKHR--HVSVKALKKWSKQILKGLNYLHTHEPCVIHRDLNCSNVFVNGNTGQVKIGDLGVAAIVGKSHSAHSMLGTPEFMAPELY-DEDYTELVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGQRPDALNKIKDPEVKEFIERCLAQ-PRARPSAAELLKDPF 839
            C  G++ E  KK    +   + L KW  Q+   ++YLH++   V+HRDL CSN+F+  +   +++GD G+A  +       S++GTP +M PEL  D  Y    DI+S G C+ EM      +   D    I K   S   P  L     P +K  I+  L + P  RP+A+E+LK P+
Sbjct:   88 CEGGDMAELMKKANGTYFPEEKLLKWFAQLALAVDYLHSN--FVLHRDLKCSNIFLTKDQ-DIRLGDFGLAKTLKADDLTSSVVGTPNYMCPELLADIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISKINRSSIGP--LPPCYSPSMKSLIKSMLRKSPEHRPTASEILKSPY 261          
The following BLAST results are available for this feature:
BLAST of CX671669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414
Match NameE-valueIdentityDescription
NRBP_DROME4.348e-1832.62Nuclear receptor-binding protein homolog OS=Drosop... [more]
NEK2_ARATH5.678e-1834.08Serine/threonine-protein kinase Nek2 OS=Arabidopsi... [more]
M3K12_MOUSE5.678e-1835.43Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_HUMAN5.678e-1835.43Mitogen-activated protein kinase kinase kinase 12 ... [more]
M2K1_ORYSJ5.678e-1836.27Mitogen-activated protein kinase kinase 1 OS=Oryza... [more]
M3K4_HUMAN7.416e-1831.79Mitogen-activated protein kinase kinase kinase 4 O... [more]
M3K12_RAT9.686e-1835.43Mitogen-activated protein kinase kinase kinase 12 ... [more]
M2K2_ARATH9.686e-1832.45Mitogen-activated protein kinase kinase 2 OS=Arabi... [more]
PAKH_DICDI1.265e-1734.73Serine/threonine-protein kinase pakH OS=Dictyostel... [more]
NEK5_ORYSJ1.265e-1733.52Serine/threonine-protein kinase Nek5 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D11-H22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671669 ID=CX671669; Name=CX671669; organism=Citrus sinensis; type=EST; length=846bp
TTTTTTTTTTTTTTTTTAGAATTCACAGGAAAAATTCTTTGAATCAAATG
AAACTTACACGTATGTCGCATATTTATATGTACAGTTCAAAACAACACAT
CTACTTCATCCCTTGCCCCGCATATTACCCACTTACTTCAATTTTGATCC
TAAGAAATGAAAATCAATGCCGAAACCACCAATAATCATCATAAGCTTAA
AAAAAAGAAAATAAAAATCATTGGCTGCTTCAGCCATTCACATATCTACT
TCAAAGAAAAGACAACATAATTTGGTTACAAATCGTTTTCGTCATCATCT
TCGATCCCGTCAAAGAAAGGATCCTTAAGTAGCTCGGCCGCCGACGGCCG
CGCCCTAGGCTGAGCAAGACACCTCTCAATGAACTCCTTTACCTCTGGAT
CCTTAATCTTGTTCAATGCATCAGGCCTCTGCCCAGACGACACCTTCTTG
TAAATTTTGGCCACATTGTCGCATTCGCTGTAAGGTATCTCCAACGTCAC
CATCTCTAGCACGCACATCCCAAACGAGTATATGTCCACAAGCTCCGTGT
AATCCTCATCGTACAGCTCCGGCGCCATGAACTCCGGCGTCCCCAGCATC
GAATGCGCCGAATGGCTCTTTCCCACTATCGCCGCCACCCCGAGATCACC
GATCTTAACCTGGCCAGTGTTTCCGTTGACGAAAACGTTGCTACAATTGA
GATCCCTATGAATGACACAAGGCTCGTGCGTGTGCAAATAATTCAACCCC
TTCAAGATTTGCTTTGACCATTTCTTGAGCGCCTTCACGGAAACATGCCG
GTGCTTTTTCCGGTACTCTCTCAAGTTACCGGAAGTGCAGACTTCG
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