CX671664

Overview
NameCX671664
Unique NameCX671664
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13580 contig Csv1_Contig13580:448..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.536e-17
Identity = 41/89 (46.07%), Postives = 60/89 (67.42%), Query Frame = -1
Query:  498 CKRPKDNNTKAKVS-RFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHP 761
            C + K   T A     F+ R+ D     ++ DGY+WRKYGQK  ++N  PR+Y++C++  +C VKK+VQR A+DP+++V TYEG HNHP
Sbjct:   88 CNKGKGKRTLAMQRIAFHTRSDDD----VLDDGYRWRKYGQKSVKNNAHPRSYYRCTYH-TCNVKKQVQRLAKDPNVVVTTYEGVHNHP 171          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.193e-16
Identity = 43/95 (45.26%), Postives = 60/95 (63.16%), Query Frame = -1
Query:  453 TKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSH 737
            TK KV +  V     +  L + DGY+WRKYGQK  +D+P PR Y++C+    C VKK+V+RS  DPS ++ TYEG+H HP+P     +   SPS+
Sbjct:   99 TKKKVPK--VSFITRSEVLHLDDGYKWRKYGQKPVKDSPFPRNYYRCT-TTWCDVKKRVERSFSDPSSVITTYEGQHTHPRPLLIMPKEGSSPSN 190          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.193e-16
Identity = 42/90 (46.67%), Postives = 59/90 (65.56%), Query Frame = -1
Query:  498 KDNNTKAKVSR------FYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHP 749
            K    K K SR      F+ R+ D     ++ DGY+WRKYGQK  + N  PR+Y++C++  +C VKK+VQR A+DP+++V TYEG HNHP
Sbjct:   71 KGKELKEKRSRKVPRIAFHTRSDDD----VLDDGYRWRKYGQKSVKHNAHPRSYYRCTYH-TCNVKKQVQRLAKDPNVVVTTYEGVHNHP 155          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.864e-16
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = -1
Query:  480 KRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSK 758
            K  K+N  + + +R           L  +DGY+WRKYGQK  +++P PR+Y++C+ A SC VKK+V+RS  DPS +V TYEG+H H  P  S+
Sbjct:  148 KAKKNNQKRQREARVAFMTKSEVDHL--EDGYRWRKYGQKAVKNSPFPRSYYRCTTA-SCNVKKRVERSFRDPSTVVTTYEGQHTHISPLTSR 237          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.864e-16
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = -1
Query:  495 CKRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQ 761
            CK+ + N  K  V    V A  +    I  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R+ +DP++L+ TYEGEH H Q
Sbjct:  220 CKKSRKNRMKRTVR---VPAISAKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRHNQ 305          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.740e-16
Identity = 35/63 (55.56%), Postives = 49/63 (77.78%), Query Frame = -1
Query:  492 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQP 680
            I+ DGY+WRKYGQKV + NP+PR+Y+KC+ AP C V+K V+R++ D   ++ TYEG+HNH  P
Sbjct:  485 ILDDGYRWRKYGQKVVKGNPNPRSYYKCT-APGCTVRKHVERASHDLKSVITTYEGKHNHDVP 546          

HSP 2 Score: 69.3218 bits (168), Expect = 2.774e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = -1
Query:  480 KDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSK 674
            +DGY WRKYGQK+ + +  PR+Y+KC+  P+C VKKKV+RS E   I    Y+G HNH +P  ++
Sbjct:  273 EDGYNWRKYGQKLVKGSEYPRSYYKCT-NPNCQVKKKVERSREG-HITEIIYKGAHNHLKPPPNR 335          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.884e-16
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = -1
Query:  489 IVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 680
            I+ DGY+WRKYGQKV + NP+PR+Y+KC+F   C V+K V+R+ +DP  ++ TYEG+H H  PT
Sbjct:  232 ILDDGYRWRKYGQKVVKGNPNPRSYYKCTFT-GCFVRKHVERAFQDPKSVITTYEGKHKHQIPT 294          

HSP 2 Score: 75.485 bits (184), Expect = 3.870e-13
Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = -1
Query:  468 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELS 671
            DGY WRKYGQK  + + +PR+YFKC++ P+C  KKKV+ S     ++   Y+G HNHP+P  +K   S
Sbjct:  118 DGYNWRKYGQKQVKGSENPRSYFKCTY-PNCLTKKKVETSLVKGQMIEIVYKGSHNHPKPQSTKRSSS 184          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.332e-16
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = -1
Query:  489 CKRPKDNNTKAKVSRFYVRASDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPT 761
            CK+ + N  K  V    V A  +    I  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R+ +D ++L+ TYEGEH H Q T
Sbjct:  217 CKKSRKNRMKRTVR---VPAVSAKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGEHRHHQST 304          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.332e-16
Identity = 39/111 (35.14%), Postives = 64/111 (57.66%), Query Frame = -1
Query:  369 SDSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNHPQPTDSKAELSLSPSHVATIGNPIHVSAASSMLSASPTATLDMI 701
            S S+  ++  D + WRKYGQK  + +P PR Y++CS +  C  +K+V+RS  DP++LV TY  EHNHP P    A    + S  ++  NP     +++ +++S   + + I
Sbjct:  208 SRSSGEVVPSDLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPIQRNALAGSTRSSTSSSSNPNPSKPSTANVNSSSIGSQNTI 318          
BLAST of CX671664 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.088e-15
Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = -1
Query:  501 DNNTKAKVSRFYVRAS--DSNSTLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPSILVATYEGEHNH 746
            DN  K +  +   R +    +   ++ DG++WRKYG+K+ +++P PR Y+KCS    CPVKK+V+R  +DPS ++ TYEG HNH
Sbjct:   87 DNQNKKEKKKIKGRVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCS-VDGCPVKKRVERDRDDPSFVITTYEGSHNH 169          
The following BLAST results are available for this feature:
BLAST of CX671664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK56_ARATH7.536e-1746.07Probable WRKY transcription factor 56 OS=Arabidops... [more]
WRK68_ARATH2.193e-1645.26Probable WRKY transcription factor 68 OS=Arabidops... [more]
WRK24_ARATH2.193e-1646.67Probable WRKY transcription factor 24 OS=Arabidops... [more]
WRK23_ARATH2.864e-1644.09Probable WRKY transcription factor 23 OS=Arabidops... [more]
WRK11_ARATH2.864e-1644.94Probable WRKY transcription factor 11 OS=Arabidops... [more]
WRKY2_ARATH3.740e-1655.56Probable WRKY transcription factor 2 OS=Arabidopsi... [more]
WRK26_ARATH4.884e-1654.69Probable WRKY transcription factor 26 OS=Arabidops... [more]
WRK17_ARATH8.332e-1643.96Probable WRKY transcription factor 17 OS=Arabidops... [more]
WRK14_ARATH8.332e-1635.14Probable WRKY transcription factor 14 OS=Arabidops... [more]
WRK50_ARATH1.088e-1542.86Probable WRKY transcription factor 50 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D08-H16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671664 ID=CX671664; Name=CX671664; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTAAAAGGGAAAAATTCTCCTTTTTCGTTAATTTTGAAGTTCCATG
TAATGTACATTAATATTGCAAGGTATGGTCTCCAGACTCTAATCCTCCAT
TAAAGTAACTAAAGCAAAGCAAAAATACAGAAGTTGATACAAATTAACAT
CCATAATCTGTGTTGATCCTGGCTAGCTAGAGTGACCATCTTTGTGTTCG
GGCCTGATCAGCAAATCTTCCTGAAATAGCTGCTGCAAGTGCTGCTGTAA
AATTAGGATCTTTGGTCAAATTAGAAGCCATTTGTTGGACCAAAATCTGA
TGGATTGCTGGAGCTTCAATTTGTTGAACTGATGATTTTTTGGCATCATC
AAACAAAAATCCAGGTTGAATCATATCAAGAGTTGCAGTAGGGCTTGCTG
ATAGCATCGATGACGCCGCAGAAACATGAATAGGATTTCCAATAGTTGCA
ACATGGCTAGGGCTCAATGATAATTCAGCTTTTGAATCCGTAGGCTGAGG
ATGATTATGCTCTCCTTCATAAGTTGCCACTAAAATTGATGGATCCTCAG
CACTTCTTTGCACCTTCTTCTTTACGGGACAGCTTGGGGCGAAAGAACAC
TTGAAGTAAGCCCTAGGTGATGGGTTGTCTCTTGTAACCTTTTGGCCATA
CTTTCTCCATTGATACCCATCCTTCACAATCAGGGTTGAATTTGAATCAC
TGGCTCTCACATAAAACCTAGAAACTTTTGCCTTGGTGTTGTTATCCTTT
GGCCTTTTGCATGACTCTTCGTCAGTACTAGTGCTGGACTCAGTAGCGTG
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