CX671659

Overview
NameCX671659
Unique NameCX671659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_NATTJ (60 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groL PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.723e-51
Identity = 106/206 (51.46%), Postives = 144/206 (69.90%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG AR+VTI KD TTI+    ++++IQ RI QL+ ++ ET S +D EKL ER+AKL+GGVAV++VGAATETE++++KLRIEDA N+T AA+EEGIV GGG AL+   D +P++++   D DE  G  IV++AL  P   +AHN+           K      G+NA+ + Y NML AGV+DP KVTR AL+NA S+A M LTT+A+
Sbjct:  315 LGRARQVTITKDDTTIVDGYGNEEDIQKRITQLRTQIEETTSDFDREKLEERLAKLAGGVAVVEVGAATETEMKEKKLRIEDALNSTRAAVEEGIVAGGGTALI---DVLPSLEEVQADGDESTGVSIVRRALEEPVRQLAHNSGAEGSIVAEQVKQKGTNIGFNALENDYTNMLDAGVVDPKKVTRSALENAGSIAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_CYAPA (60 kDa chaperonin, cyanelle OS=Cyanophora paradoxa GN=groL-A PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.723e-51
Identity = 107/206 (51.94%), Postives = 143/206 (69.42%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG AR+V I KD TT+IA+  +++ + AR  Q+++++ ETDS Y+ EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +        + +E +G  IV ++L AP   I  NA           KD  +  GYNA   ++ +M +AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  316 LGKARQVNITKDYTTVIAEG-NEEGVSARCEQIRRQIEETDSAYEKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAIELENWVQSNLEHEELIGGMIVARSLTAPLKRIVENAGQNGAVIAEQVKDKPFNIGYNAANAQFVDMFEAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAAT (60 kDa chaperonin OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=groL PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.862e-51
Identity = 110/206 (53.40%), Postives = 146/206 (70.87%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA KV + KD+TT++     ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K++E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  315 LGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAAE (60 kDa chaperonin OS=Staphylococcus aureus (strain Newman) GN=groL PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.862e-51
Identity = 110/206 (53.40%), Postives = 146/206 (70.87%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA KV + KD+TT++     ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K++E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  315 LGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAAC (60 kDa chaperonin OS=Staphylococcus aureus (strain COL) GN=groL PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.862e-51
Identity = 110/206 (53.40%), Postives = 146/206 (70.87%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA KV + KD+TT++     ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K++E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  315 LGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAA8 (60 kDa chaperonin OS=Staphylococcus aureus (strain NCTC 8325) GN=groL PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.862e-51
Identity = 110/206 (53.40%), Postives = 146/206 (70.87%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA KV + KD+TT++     ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K++E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  315 LGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAA3 (60 kDa chaperonin OS=Staphylococcus aureus (strain USA300) GN=groL PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.862e-51
Identity = 110/206 (53.40%), Postives = 146/206 (70.87%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA KV + KD+TT++     ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K++E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  315 LGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_LACPL (60 kDa chaperonin OS=Lactobacillus plantarum GN=groL PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.862e-51
Identity = 107/207 (51.69%), Postives = 146/207 (70.53%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLG A KVT+ KD+TTI+  A SKD I  R+  ++ ++ ET S +D EKL ER+AKL+GGVAV++VGAATETEL++RK RIEDA NAT AA+EEG V GGG AL+++   V A+K   E  D + G +IV++AL  P   IA NA           K+ +   G+NA TD++ +M++AG++DP KVTR ALQNAASV+ ++LTT+A+
Sbjct:  314 QLGQANKVTVTKDNTTIVEGAGSKDAISERVEFIRNQIGETTSDFDKEKLQERLAKLAGGVAVVRVGAATETELKERKYRIEDALNATRAAVEEGFVAGGGTALINVIKDVAALK---ETGDVQTGINIVKRALEEPVRQIAENAGLEGSVIVEKMKEQKPGVGFNAATDEWVDMIKAGIVDPTKVTRSALQNAASVSALLLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.862e-51
Identity = 103/206 (50.00%), Postives = 146/206 (70.87%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV + K+ TTI+    SK++I++R   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG ALV     + A    L + DE++GA IV KAL AP   IA NA                + GY+A+ D Y +M++AG++DP KVTRCAL++AASVAG++LTT+A+
Sbjct:  317 LGKAKKVIVSKEDTTIVEGLGSKEDIESRCESIKKQIEDSTSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLSRSSSEGYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEAL 522          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_NAUPA (60 kDa chaperonin OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=groL PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.350e-51
Identity = 107/205 (52.20%), Postives = 147/205 (71.71%), Query Frame = -2
Query:  199 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 813
            LG A +V + K++TTI+     K  I+ARIAQ+KKE+ ET S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA+EEGIV GGGAA++  + ++      +EDADE++G DIV++A+ AP   IA NA           ++++  TG+NA T +Y +M +AG+IDP KV R ALQNA SV  ++LTT+A
Sbjct:  318 LGQAGRVVVDKENTTIVDGRGDKAAIEARIAQIKKEIEETTSDYDREKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAAILKAAKNISV---NVEDADEKIGVDIVKQAVKAPIKQIAKNAGFEPGIVAMKVEEADENTGFNAATGEYVDMFKAGIIDPTKVERIALQNAVSVGSLLLTTEA 519          
The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_NATTJ3.723e-5151.4660 kDa chaperonin OS=Natranaerobius thermophilus (... [more]
CH60_CYAPA3.723e-5151.9460 kDa chaperonin, cyanelle OS=Cyanophora paradoxa... [more]
CH60_STAAT4.862e-5153.4060 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAAE4.862e-5153.4060 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAAC4.862e-5153.4060 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAA84.862e-5153.4060 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAA34.862e-5153.4060 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_LACPL4.862e-5151.6960 kDa chaperonin OS=Lactobacillus plantarum GN=gr... [more]
CH601_CHLCV4.862e-5150.0060 kDa chaperonin 1 OS=Chlamydophila caviae GN=gro... [more]
CH60_NAUPA6.350e-5152.2060 kDa chaperonin OS=Nautilia profundicola (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTA
AAACTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAA
AACTCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTG
TGGCGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAG
CCTGAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCA
CATCTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTC
ATACTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCA
CCTTCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGT
GATGCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTC
ATCTGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGAT
GAACCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCA
AAAGTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTC
AGTTTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATT
TAGCAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCA
GCCAACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGA
TGCAGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTC
TAGCTGTACCTAGCTGC
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