CX671659

Overview
NameCX671659
Unique NameCX671659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_LACBA (60 kDa chaperonin OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=groL PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.350e-51
Identity = 107/207 (51.69%), Postives = 145/207 (70.05%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLG A+KV + KD TT++  A SKD+I AR+A++K ++ +T S +D +KL ER+AKLSGGVAV++VGAATETEL++RK RIEDA NAT AA+EEG V GGG AL+++   V  ++    + DE+ G +IV +AL  P   IA NA           K  +   GYNA  +KYE+M+ AG+ DP KVTR ALQNAASV+ ++LTT+A+
Sbjct:  314 QLGQAQKVNVTKDDTTVVEGAGSKDQIAARVAEIKGQIEDTTSDFDRDKLKERLAKLSGGVAVVRVGAATETELKERKYRIEDALNATRAAVEEGFVAGGGTALINVIGDVAKLE---AEGDEKTGINIVLRALEEPVRQIAQNAGVEGSVVVEHLKGEKPGVGYNAADNKYEDMVAAGITDPTKVTRSALQNAASVSALLLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_COPPD (60 kDa chaperonin OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=groL PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.350e-51
Identity = 111/206 (53.88%), Postives = 147/206 (71.36%), Query Frame = -2
Query:  196 GTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 810
            G AR V + K+STTI+    S +EI+ RIAQ++K+L  T+S Y+ EKL ER+AKL+GGVAVIKVGAATETE++++K R+EDA +AT AA+EEGIV GGG  LV  S     + DKL  + DE +GA IV+KAL+ PA +IA NA           K  E+  G++A+  +Y +M +AG+IDP KVTR ALQNAAS+A MVLTT+A+
Sbjct:  317 GHARSVKVDKESTTIVGGKGSSEEIEKRIAQIRKQLETTESEYEKEKLQERLAKLAGGVAVIKVGAATETEMKEKKHRVEDAVSATKAAMEEGIVAGGGVTLVKAS----TVLDKLPLENDELIGATIVKKALMEPARVIAENAGFAGEVVVEELKKREYPVGFDAVKGEYVDMFEAGIIDPTKVTRSALQNAASIAAMVLTTEAL 518          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_PROM3 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL2 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.350e-51
Identity = 108/206 (52.43%), Postives = 144/206 (69.90%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG  R++TI KD+TTI+A   ++D + AR+A +K+EL ETDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AA+EEGIV GGG  L+ LS  +  + ++  + D+R G +IVQ+AL APA  IA NA                  G+NA++  YE++L AG++D  KV R ALQ+A S+A M++TT+ +
Sbjct:  315 LGQVRRITISKDNTTIVAKDENRDAVNARVASIKRELDETDSEYDREKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAVEEGIVAGGGTTLLRLSKGLRKLAEQQLNGDQRTGVEIVQRALSAPARQIAINAGENGDVVISEM--QRLNKGFNAISSTYEDLLGAGILDATKVVRLALQDAVSIASMMVTTELV 518          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 8.294e-51
Identity = 104/207 (50.24%), Postives = 144/207 (69.57%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A KV + KD+TTI+ D ++++ +  R++Q+K ++   +  Y+ EKL+ERIAKLSGGVAVI+VGA TETEL+++KLR+EDA NAT AA+EEGIV GGG  L+ L+  V AIKD L + +E++GADIV++AL  P  LIA NA             S+    GYNA T KYE+++ AG+IDP KV RC L++A+SVA   L +  +
Sbjct:  365 LGNAAKVVLTKDTTTIVGDGSTQEAVNKRVSQIKNQIEAAEQEYEKEKLSERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCV 571          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_CLOTH (60 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groL PE=1 SV=3)

HSP 1 Score: 200.675 bits (509), Expect = 8.294e-51
Identity = 110/207 (53.14%), Postives = 145/207 (70.05%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLG AR+V ++K++T I+  A    EIQ RIA +K ++ ET S +D EKL ER+AKL+GGVAVI+VGAATETE++++KLRIEDA  AT AA+EEGIV GGG ALV++   V  + D +   DE+ G  I+ +AL  P   IA NA           K SE   G++A  +KY NM++AG++DPAKVTR ALQNAASVA MVLTT+++
Sbjct:  314 QLGRARQVKVQKENTIIVDGAGDPKEIQKRIASIKSQIEETTSDFDREKLQERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALAATKAAVEEGIVAGGGTALVNVIPKVAKVLDTV-SGDEKTGVQIILRALEEPVRQIAENAGLEGSVIVEKVKASEPGIGFDAYNEKYVNMIEAGIVDPAKVTRSALQNAASVASMVLTTESV 519          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.294e-51
Identity = 108/207 (52.17%), Postives = 147/207 (71.01%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLG A KV + K++TTI+  A   ++I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++    + D + G +IV +AL  P   IAHNA           K+ +   G+NA T ++ NM++ G++DP KVTR ALQNAASVA M+LTT+A+
Sbjct:  314 QLGRASKVVVTKENTTIVEGAGDTEKIAARVNQIRAQVEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEKIGVGFNAATGEWVNMIEKGIVDPTKVTRSALQNAASVAAMLLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAEP (60 kDa chaperonin OS=Staphylococcus epidermidis GN=groL PE=3 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 110/206 (53.40%), Postives = 142/206 (68.93%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA KV + KD TT++     ++ I AR+ Q+K ++ ETDS  D EKL ER+AKL+GGVAVIKVGAA++TEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V  IK    + D   G +IV KAL AP   IA NA           K +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  315 LGTANKVEVTKDHTTVVDGNGDENNIDARVGQIKAQIEETDSECDKEKLQERVAKLAGGVAVIKVGAASDTELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIK---AEGDVETGVNIVLKALQAPVRQIAENAGLEGSIIVERLKHAEAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_HELMI (60 kDa chaperonin OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 110/206 (53.40%), Postives = 145/206 (70.39%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG AR+V I+K+ T I+  A   D+I+ARIAQ++++  E+ S +D EKL ER+AKL+GGVAVI+VGAATETEL+D+KLRIEDA NAT AA+EEGIVPGGG ALV +   +  ++      DE  G  I+++AL  P   IA+NA           K      G+NA T+ YE+M+ AG++DPAKVTR ALQNAAS+A M+LTT+AI
Sbjct:  315 LGRARQVRIKKEETIIVDGAGRADDIKARIAQIRRQHEESTSEFDKEKLQERLAKLAGGVAVIQVGAATETELKDKKLRIEDALNATRAAVEEGIVPGGGTALVSIQKALDNVETPA--GDEATGVAIIRRALEEPLRQIANNAGYEGSVVVEKVKSLPVGQGFNAATEVYEDMIAAGIVDPAKVTRSALQNAASIAAMLLTTEAI 518          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_GRATL (60 kDa chaperonin, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 115/209 (55.02%), Postives = 149/209 (71.29%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSD--HVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLG+AR+V I KDSTTI+ADA  KD IQAR  Q++++L    + Y  +KL ER+AKLSGGVAV+KVGAATETE+ D+KLR+EDA NAT AAIEEGIVPGGG+  VHLS+   V AI + +E  +E +GA I+  +L+ P   I  NA           K+S ++TGYNA   +  +M + G+IDPAKVTR ALQNAAS+A M+LTT+ +
Sbjct:  316 QLGSARRVQITKDSTTIVADA-QKDLIQARCDQIRRQLEAATNSYAKDKLHERLAKLSGGVAVVKVGAATETEMRDKKLRLEDAINATKAAIEEGIVPGGGSTFVHLSEVLRVWAINNLVE--EELVGALIIVDSLLHPLKRIVENAGNNGSIIIEKIKNSNFSTGYNADIGQIVDMYKEGIIDPAKVTRSALQNAASIASMILTTECL 521          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_CHLFF (60 kDa chaperonin OS=Chlamydophila felis (strain Fe/C-56) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 103/206 (50.00%), Postives = 145/206 (70.39%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV + K+ TTI+    +K++I+AR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG ALV     + A    L + DE++GA IV KAL AP   IA NA                  GY+A+ D Y +M++AG++DP KVTRCAL++AASVAG++LTT+A+
Sbjct:  317 LGKAKKVIVSKEDTTIVEGLGNKEDIEARCENIKKQIEDSTSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLARSSNEGYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEAL 522          
The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LACBA6.350e-5151.6960 kDa chaperonin OS=Lactobacillus brevis (strain ... [more]
CH60_COPPD6.350e-5153.8860 kDa chaperonin OS=Coprothermobacter proteolytic... [more]
CH602_PROM36.350e-5152.4360 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
RUBB_PEA8.294e-5150.24RuBisCO large subunit-binding protein subunit beta... [more]
CH60_CLOTH8.294e-5153.1460 kDa chaperonin OS=Clostridium thermocellum (str... [more]
CH60_BACA28.294e-5152.1760 kDa chaperonin OS=Bacillus amyloliquefaciens (s... [more]
CH60_STAEP1.083e-5053.4060 kDa chaperonin OS=Staphylococcus epidermidis GN... [more]
CH60_HELMI1.083e-5053.4060 kDa chaperonin OS=Heliobacterium modesticaldum ... [more]
CH60_GRATL1.083e-5055.0260 kDa chaperonin, chloroplastic OS=Gracilaria ten... [more]
CH60_CHLFF1.083e-5050.0060 kDa chaperonin OS=Chlamydophila felis (strain F... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTA
AAACTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAA
AACTCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTG
TGGCGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAG
CCTGAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCA
CATCTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTC
ATACTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCA
CCTTCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGT
GATGCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTC
ATCTGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGAT
GAACCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCA
AAAGTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTC
AGTTTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATT
TAGCAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCA
GCCAACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGA
TGCAGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTC
TAGCTGTACCTAGCTGC
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