CX671659

Overview
NameCX671659
Unique NameCX671659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 109/206 (52.91%), Postives = 141/206 (68.45%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A KV + K++TTI+  A   ++I  R+ QLK ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++   + A+K      DE  G +IV +AL  P   IAHNA           K  E   GYNA T +Y NM++ G++DP KVTR ALQNAASV+ M LTT+A+
Sbjct:  315 LGRAAKVVVTKENTTIVEGAGDPEQISGRVNQLKAQVEETTSEFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVKAVDATGDEATGVNIVLRALEEPVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSALQNAASVSAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_BACP2 (60 kDa chaperonin OS=Bacillus pumilus (strain SAFR-032) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 108/207 (52.17%), Postives = 146/207 (70.53%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLG A KV + K++TTI+  +    +I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++   V +I+    D D + G +IV ++L  P   IAHNA           K+ E   G+NA T+++ NM++ G++DP KVTR ALQNAASVA M+LTT+A+
Sbjct:  314 QLGRASKVVVTKENTTIVEGSGDSAQIAARVNQIRAQVEETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYKKVASIE---ADGDVQTGVNIVLRSLEEPIRQIAHNAGLEGSVIVERLKNEEIGVGFNAATNEWVNMIEKGIVDPTKVTRSALQNAASVAAMLLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_MYCA1 (60 kDa chaperonin 2 OS=Mycobacterium avium (strain 104) GN=groL2 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 110/206 (53.40%), Postives = 139/206 (67.48%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG ARKV + KD TTI+  A   D I  R+AQ++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+H    +PA+ +   + DE  GA+IV+ AL AP   IA N            ++S   TG NA T +YE++L+AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  315 LGKARKVVVTKDETTIVEGAGDSDAIAGRVAQIRTEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLHA---IPALDELKLEGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSPAGTGLNAATGEYEDLLKAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_ANASL (60 kDa chaperonin 1 OS=Anabaena sp. (strain L31) GN=groL1 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.083e-50
Identity = 108/206 (52.43%), Postives = 144/206 (69.90%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG AR++TI KDSTTI+A+  +   ++AR+ Q+++++ ET+S YD  KL ER+AKLSGGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  + A  +     +E  GA IV +AL AP   IA NA           K+ E+   +NA T+++ +M  AG++DPAKVTR ALQNA S A MVLTT  +
Sbjct:  316 LGKARRITITKDSTTIVAEG-NDVAVKARVEQIRRQMEETESSYDKGKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEAWANSTLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEKEFNVDFNAATNEFVDMFSAGIVDPAKVTRSALQNALSYACMVLTTGTV 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_OCEIH (60 kDa chaperonin OS=Oceanobacillus iheyensis GN=groL PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.415e-50
Identity = 107/207 (51.69%), Postives = 142/207 (68.60%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLG A KV + K++TT++  +   + I +R+AQ++ +  E+ S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T A +EEG+VPGGG ALV++   V    +   + DE  GA IV +AL  P   I HNA           K  +   GYNA TD++ NM++AG++DP KVTR ALQNAASVA M LTT+A+
Sbjct:  314 QLGRASKVVVTKENTTVVEGSGDPEAISSRVAQIRAQAEESTSDFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAGVEEGMVPGGGTALVNIHRQV---SELTLEGDEATGASIVLRALEEPVRQIVHNAGLEGSIIVERLKGEKVGIGYNAATDEWVNMVEAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_BACHD (60 kDa chaperonin OS=Bacillus halodurans GN=groL PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.415e-50
Identity = 108/207 (52.17%), Postives = 144/207 (69.57%), Query Frame = -2
Query:  196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            QLG A KV + K++TTI+  A   D+I AR+ Q+K ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++   + A+     + DE  G +IV +AL  P   IAHNA           K  E   G+NA T ++ NM++AG++DP KVTR ALQ+AASV+ M LTT+A+
Sbjct:  314 QLGRASKVVVTKENTTIVEGAGESDKIAARVNQIKAQIEETTSDFDKEKLQERLAKLAGGVAVLKVGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVSSIGAEGDEATGVNIVLRALEEPVRQIAHNAGLEGSVIVERLKKEEAGFGFNAATGEWVNMVEAGIVDPTKVTRSALQHAASVSAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_STRCO (60 kDa chaperonin 1 OS=Streptomyces coelicolor GN=groL1 PE=3 SV=3)

HSP 1 Score: 199.904 bits (507), Expect = 1.415e-50
Identity = 108/207 (52.17%), Postives = 144/207 (69.57%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKL-EDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTAR++T+ KD TTI+  A  +DE+Q RIAQ+K E+  TDS +D EKL ER+AKL+GGV VIKVGAATE EL++RK R+EDA +AT AA+EEGIV GGG+ALVH    V  ++  L +  DE  G  +V++A V P   IA NA            D +   G+NA T +Y ++++AGVIDP KVTR AL+NAAS+A ++LTT+ +
Sbjct:  317 LGTARRITVTKDDTTIVDGAGKRDEVQGRIAQIKAEIENTDSDWDREKLQERLAKLAGGVCVIKVGAATEVELKERKHRLEDAISATRAAVEEGIVSGGGSALVHA---VKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVADLDKGQGFNAATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETL 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_MESSB (60 kDa chaperonin 1 OS=Mesorhizobium sp. (strain BNC1) GN=groL1 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.415e-50
Identity = 107/207 (51.69%), Postives = 147/207 (71.01%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A++V+I K++TTI+  A  K EI+ R+AQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIVPGGG AL+  S     IK K E+AD+  G +IV++A+ APA  IA NA            D+   T GYNA T +Y +M+  G++DP KV R ALQ+AASVAG+++TT+A+
Sbjct:  317 LGRAKRVSIAKETTTIVDGAGQKSEIEGRVAQIKSQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALLRASSE---IKAKGENADQEAGVNIVRRAIQAPARQIASNAGAEASIVVGKILDNNAVTFGYNAQTGEYGDMIGMGIVDPMKVVRTALQDAASVAGLLITTEAM 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.848e-50
Identity = 99/208 (47.60%), Postives = 143/208 (68.75%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDS--EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA K+TI K+ TT++ D ++  ++ AR+ Q++    +TD  Y+ EKL ERIA+LSGGVA+I+VGA TETEL+++KLR+EDA NAT AA+EEG+VPGGG  L+ LS+ V  IK ++ D ++++GADI+++AL  P  LIA NA             +      GYNA TD +EN+++ G+IDP+KV RC+++NA SVA   L    +
Sbjct:  201 LGTAAKITITKERTTVVGDGSTAADVAARVKQIRNLQMQTDQDYEREKLQERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTFLLADVV 408          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_SYNWW (60 kDa chaperonin OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.848e-50
Identity = 110/206 (53.40%), Postives = 145/206 (70.39%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG AR++ I+KD T I+  A S+  I+ R A +K++L ET+S YD EKL ER+AKLSGGVAVI+VGAATETEL++RK RIEDA  AT AA+EEGIV GGG  L++    + AI+      DE  G ++V+KA+  P   IA+NA           K++E   GYNA+T  YE+M+ AG+IDPAKVTR A+QNAAS++ MVLTT+A+
Sbjct:  316 LGKARQIVIKKDETIIVDGAGSEQAIRDRSANIKRQLEETESEYDREKLQERLAKLSGGVAVIQVGAATETELKERKHRIEDALAATKAAVEEGIVSGGGVTLINA---IKAIEKIEAQGDELTGINLVKKAMEEPLRQIANNAGIEGSVVVEKVKEAETGIGYNALTGVYESMIAAGIIDPAKVTRSAVQNAASISAMVLTTEAV 518          
The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BACSK1.083e-5052.9160 kDa chaperonin OS=Bacillus clausii (strain KSM-... [more]
CH60_BACP21.083e-5052.1760 kDa chaperonin OS=Bacillus pumilus (strain SAFR... [more]
CH602_MYCA11.083e-5053.4060 kDa chaperonin 2 OS=Mycobacterium avium (strain... [more]
CH601_ANASL1.083e-5052.4360 kDa chaperonin 1 OS=Anabaena sp. (strain L31) G... [more]
CH60_OCEIH1.415e-5051.6960 kDa chaperonin OS=Oceanobacillus iheyensis GN=g... [more]
CH60_BACHD1.415e-5052.1760 kDa chaperonin OS=Bacillus halodurans GN=groL P... [more]
CH601_STRCO1.415e-5052.1760 kDa chaperonin 1 OS=Streptomyces coelicolor GN=... [more]
CH601_MESSB1.415e-5051.6960 kDa chaperonin 1 OS=Mesorhizobium sp. (strain B... [more]
RUBB_CHLRE1.848e-5047.60RuBisCO large subunit-binding protein subunit beta... [more]
CH60_SYNWW1.848e-5053.4060 kDa chaperonin OS=Syntrophomonas wolfei subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTA
AAACTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAA
AACTCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTG
TGGCGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAG
CCTGAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCA
CATCTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTC
ATACTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCA
CCTTCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGT
GATGCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTC
ATCTGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGAT
GAACCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCA
AAAGTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTC
AGTTTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATT
TAGCAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCA
GCCAACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGA
TGCAGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTC
TAGCTGTACCTAGCTGC
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