CX671659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_PEDPA (60 kDa chaperonin OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=groL PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.848e-50 Identity = 105/207 (50.72%), Postives = 146/207 (70.53%), Query Frame = -2 Query: 196 QLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816 QLG + KVT+ KD TTI+ A S+++I R+ +K++++ET S +D EKL ER+AKLSGGVAVI+VGAATETEL+++K RIEDA NAT AA+EEG VPGGG AL ++ + ++D + DE G +IV++AL P IA NA K + GYNA D++ +M++AG++DP KVTR ALQNAASV+ ++LTT+A+ Sbjct: 314 QLGQSNKVTVTKDDTTIVEGAGSQEQIAERVGIIKQQISETTSDFDKEKLQERLAKLSGGVAVIRVGAATETELKEKKYRIEDALNATRAAVEEGFVPGGGTALANV---ISDLEDVEAEGDEATGVNIVRRALEEPVRQIAENAGEEGSVIVTKLKGQKPGVGYNAANDEWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAV 517
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.848e-50 Identity = 106/208 (50.96%), Postives = 154/208 (74.04%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG+A+++ I KD+TTII A + +I+ R+ +++ + ++ S YD EKL ER+AKL+GGVAVI VGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+ + HV +KD K+ + DE++G DIV++A+ P +I NA + ++ T+ GYNA+TD YE+++QAGVIDP KVTR ALQNAAS+AG++LTT+A+ Sbjct: 317 LGSAKRIVIDKDNTTIIDGAGEQKDIEGRVREIRGAIDKSTSDYDREKLQERLAKLAGGVAVINVGAATEAEMKEKKARVEDALHATRAAVEEGIVPGGGVALIR-AQHV--LKDVKVAERDEQIGVDIVRRAIEEPLRMIVQNAGGEGSIVVEKIRTAKETSFGYNALTDVYEDLVQAGVIDPTKVTRTALQNAASIAGLLLTTEAL 521
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_DESAP (60 kDa chaperonin OS=Desulforudis audaxviator (strain MP104C) GN=groL PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.848e-50 Identity = 104/206 (50.49%), Postives = 147/206 (71.36%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG AR+V ++KD T ++ D I R+AQ+KK++ +T S +D EKL ER+AKL+GGVAVI VGAATETE++++KLRIEDA NAT AA+EEGIVPGGG V++ + ++ +L DER G DI+++AL AP IA+NA K+S G++A++++Y +M+ AG++DPAKVTR ALQNAAS+A M+LTT+ + Sbjct: 316 LGKARQVRVKKDETIVVDGQGDADAITKRLAQIKKQIEDTTSDFDREKLQERLAKLAGGVAVINVGAATETEMKEKKLRIEDALNATRAAVEEGIVPGGGTVYVNVIPVLNGLEPEL--PDERTGVDIIKRALEAPLRQIANNAGVEGSIVVEKVKESPAGVGFDALSEQYTDMIGAGIVDPAKVTRIALQNAASIAAMILTTETL 519
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_SYNPX (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH8102) GN=groL2 PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.848e-50 Identity = 109/206 (52.91%), Postives = 148/206 (71.84%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG AR+VTI K++TTI+A + + R+A +K+EL TDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AAIEEGIVPGGG L+ L+D + + ++LE D+R G +I+Q+ALVAP IA NA ++S G+NA+T YE+++ AG++D AKV R A+Q+A S+A +++TT+ + Sbjct: 315 LGKARRVTISKENTTIVATDDHRAAVADRVAAIKRELDATDSDYDREKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGIVPGGGTTLLQLADGLNGLVEQLE-GDQRTGVEILQRALVAPVHHIATNAGHNGDVVIEAMRNS--GQGFNALTGTYEDLMAAGIVDAAKVVRLAVQDAVSIASLLITTEVV 517
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.413e-50 Identity = 101/208 (48.56%), Postives = 146/208 (70.19%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDS--EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG A KV+I K++TTI+ D ++ +++ R+ Q++ AET+ Y+ EKL ERIA+LSGGVA+I+VGA TETEL+++KLR+EDA NAT AA+EEGIV GGG L+ LS V +IK+ L + ++++GADI+++AL P LIA+NA D+ + GYNA TD +E++++AG+IDP KV RC+L+NA SVA L + Sbjct: 32 LGLAAKVSISKEATTIVGDGRTQQQVEGRVKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVV 239
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_PORPU (60 kDa chaperonin, chloroplastic OS=Porphyra purpurea GN=groL PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.413e-50 Identity = 112/206 (54.37%), Postives = 142/206 (68.93%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG AR+V + KDSTTIIAD + +++R Q+K+++ +DS+Y+ EKL ER+AKLSGGVAVIKVGAATETE++D+KLR+EDA NAT AAIEEGIVPGGG+ VH+S + DE +GA IVQ+AL P IA NA K +++ GY+A K NM AG+IDPAKV R ALQNA S+A MVLTT+ I Sbjct: 317 LGKARRVVVTKDSTTIIADG-HEATVKSRCEQIKRQIETSDSLYEREKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGSTNVHISGELFVWAKNNLFEDELIGALIVQRALTYPLRRIAFNAGDNGAVVVEKVKTNDFCIGYDASNGKIVNMYDAGIIDPAKVARSALQNATSIAAMVLTTECI 521
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_HALOH (60 kDa chaperonin OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=groL PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.413e-50 Identity = 107/206 (51.94%), Postives = 142/206 (68.93%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LG A KVT+ K+ TTI+ A EIQ RI Q++ ++ TDS +D EKL ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEG+V GGG L+ D +PA+ + + DE G DIV+KAL AP LIA NA K + G++A ++ NM+++G++DPAKVTR ALQNAAS A M+LTT+ + Sbjct: 316 LGRAHKVTVTKEDTTIVEGAGDSKEIQNRIKQIRTQIENTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGLVAGGGTTLI---DAIPALDELNLEGDEATGVDIVRKALEAPVRLIADNAGYEGSVIVEKVKSEDKGIGFDAYNGEFVNMIESGIVDPAKVTRSALQNAASAAAMLLTTECL 518
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_BIFAS (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) GN=groL PE=3 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 2.413e-50 Identity = 109/205 (53.17%), Postives = 139/205 (67.80%), Query Frame = -2 Query: 196 GTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 810 GTA+KV + KD TTI++ SK+++ AR+AQ++ E+ +TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA AAIEEG+VPGGG ALV ++ V KD + DE GA IV + AP IA NA + G+NA TD YE+++ AGV DP KVTR ALQNAAS+AG+ LTT+A+ Sbjct: 316 GTAKKVIVSKDETTIVSGGGSKEDVAARVAQIRAEIEKTDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLVPGGGVALVQAAEKVE--KDFNLEGDEATGAAIVFSGIEAPIKQIAENAGLSGAVVIDKVRSLPEGEGFNAATDTYEDLMAAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_BIFA0 (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=groL PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.413e-50 Identity = 109/205 (53.17%), Postives = 139/205 (67.80%), Query Frame = -2 Query: 196 GTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 810 GTA+KV + KD TTI++ SK+++ AR+AQ++ E+ +TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA AAIEEG+VPGGG ALV ++ V KD + DE GA IV + AP IA NA + G+NA TD YE+++ AGV DP KVTR ALQNAAS+AG+ LTT+A+ Sbjct: 316 GTAKKVIVSKDETTIVSGGGSKEDVAARVAQIRAEIEKTDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLVPGGGVALVQAAEKVE--KDFNLEGDEATGAAIVFSGIEAPIKQIAENAGLSGAVVIDKVRSLPEGEGFNAATDTYEDLMAAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAS1 (60 kDa chaperonin OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=groL PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.152e-50 Identity = 107/206 (51.94%), Postives = 146/206 (70.87%), Query Frame = -2 Query: 196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813 LGTA K I KD+TT++ ++ I AR++Q+K ++ ETDS +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG A +++ + V I+ + D G +IV KAL AP IA NA K+++ G+NA T+++ NML+AG++DP KVTR +LQ+AASVA M LTT+A+ Sbjct: 315 LGTANKAEITKDNTTVVDGDGDQNSIDARVSQIKAQIEETDSEFDKEKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTAFMNIYEKVAKIE---AEGDIATGINIVLKALEAPVRQIAENAGLEGSIIVERLKNADIGVGFNAATNEWVNMLEAGIVDPTKVTRSSLQHAASVAAMFLTTEAV 517 The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bpback to top |