CX671659

Overview
NameCX671659
Unique NameCX671659
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_GEOKA (60 kDa chaperonin OS=Geobacillus kaustophilus GN=groL PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.152e-50
Identity = 109/206 (52.91%), Postives = 145/206 (70.39%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A KV + K++TTI+  A   + I+ARI Q++ +L ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG AL+++ + V AI+    + DE  G  IV +A+  P   IA NA           K+ +   G+NA T ++ +M++AG++DP KVTR ALQNAASVA MVLTT+A+
Sbjct:  315 LGRAAKVVVTKETTTIVEGAGDSERIKARINQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNIYNKVAAIE---AEGDEATGVKIVLRAIEEPVRQIAQNAGLEGSIIVERLKNEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAASVAAMVLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_DESAA (60 kDa chaperonin OS=Desulfatibacillum alkenivorans (strain AK-01) GN=groL PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.152e-50
Identity = 104/206 (50.49%), Postives = 146/206 (70.87%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG  ++V+I KD+TTI+  A ++  ++ R+ Q++ ++ +T S YD EKL ER+AKL GGVAVI VGAATE E++++K R+EDA NAT AA+EEGIVPGGG ALV   D V   K      ++++GA +V +AL AP  +IA+NA           K++E + GYNA TD YE++++AGVIDP KV R ALQNA S+AG++LTT+A+
Sbjct:  316 LGKCKRVSIDKDNTTIVDGAGARSALEGRVKQIRAQIDDTTSDYDREKLQERLAKLIGGVAVINVGAATEVEMKEKKARVEDALNATRAAVEEGIVPGGGVALVRAIDAVAKAK---ITGEQKIGARVVMRALEAPLRMIANNAGMEGSVVLDKVKNTEGSFGYNADTDTYEDLIEAGVIDPTKVVRLALQNACSIAGLMLTTEAM 518          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH602_SYNAS (60 kDa chaperonin 2 OS=Syntrophus aciditrophicus (strain SB) GN=groL2 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.152e-50
Identity = 107/206 (51.94%), Postives = 144/206 (69.90%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+++ I KD+TTII  A  +  ++ R+ Q++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATETE++++K R+EDA NAT AA+EEGIVPGGG A +     + A+K    + DE++G +IV+KAL  P  +IA NA           K+     G+NA T+ YE+M++AGVIDP KVTR ALQNAASVA ++LTTQ +
Sbjct:  317 LGRAKRIQIDKDNTTIIDGAGERAALEGRVKQIRAQIDETTSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVAYIRTLPILEALK---LEGDEQVGVNIVRKALEEPLKMIAANAGMEGTIVVEKVKEQSGAFGFNARTEVYEDMIEAGVIDPTKVTRFALQNAASVASLMLTTQCM 519          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH601_PROM1 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL1A) GN=groL1 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.152e-50
Identity = 110/206 (53.40%), Postives = 144/206 (69.90%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG AR+VTI KDSTTI+A+     E+  RIA +K+EL ETDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AAIEEGIV GGG  L+ LS+ +  +  KLE  D++ G +I+++AL AP   IA NA                  G+NA T +Y ++L+AG++D +KV R ALQ+A S+A +++TT+ +
Sbjct:  315 LGQARRVTITKDSTTIVANDNQNTELSNRIASIKRELDETDSEYDQEKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGIVAGGGTTLLELSEGLGDLAKKLE-GDQKTGVEIIKRALTAPTKQIAINAGFNGDVVVSDI--KRLGKGFNAQTGEYVDLLEAGILDASKVIRLALQDAVSIASLLITTEVV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_STAHJ (60 kDa chaperonin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=groL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 108/206 (52.43%), Postives = 145/206 (70.39%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG+A KV + KD+TT++      + I AR++Q+K ++ ETDS +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V  I+    + D   G +IV KAL AP   IA NA           K ++   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  315 LGSANKVEVTKDNTTVVDGDGDDNSIDARVSQIKAQIEETDSDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYNKVDEIE---AEGDVATGVNIVLKALSAPVRQIAENAGLEGSVIVERLKHADAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_HAHCH (60 kDa chaperonin OS=Hahella chejuensis (strain KCTC 2396) GN=groL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 102/207 (49.28%), Postives = 150/207 (72.46%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED-ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LGTA++V + K++TTII  A +K +I+AR+AQ+++++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA ++T AA+EEG+VPGGG ALV     + A+ D   D AD+ +G +++++A+ AP   I  NA           +  E   GYNA T+ Y +ML+ G++DPAKVTR ALQ+AAS+AG+++TT+ +
Sbjct:  317 LGTAKRVVVTKENTTIIDGAGAKSDIEARVAQIRRQIEETSSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGVALVRA---LQAVSDLAGDNADQDVGINLLRRAMEAPLRQIVANAGGEPSVVVDKVRQGEGAFGYNAGTEAYGDMLEMGILDPAKVTRTALQSAASIAGLMITTECM 520          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 107/208 (51.44%), Postives = 146/208 (70.19%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED--ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A KV + KD+TT++  A +++ I+AR+  ++ ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG +L+++   +PA++  L +  ADE  G  +V +AL AP   IA NA           K+     GYNA T +Y +M+  G++DPAKVTR ALQNAASV+ M LTT+A+
Sbjct:  315 LGRASKVVVTKDTTTVVEGAGNEETIKARVQTIRNQIEETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTSLINV---IPAVRALLSEVTADEATGVKLVLRALEAPVRQIAENAGEEGSVIVEKLKNESVGVGYNAATGEYVDMIAHGIVDPAKVTRSALQNAASVSAMFLTTEAV 519          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_CHLTR (60 kDa chaperonin OS=Chlamydia trachomatis GN=groL PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 102/206 (49.51%), Postives = 143/206 (69.42%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV + K+ TTI+     K+ ++AR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA                  GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  317 LGKAKKVIVSKEDTTIVEGMGEKEALEARCESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_CHLTB (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=groL PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 102/206 (49.51%), Postives = 143/206 (69.42%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV + K+ TTI+     K+ ++AR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA                  GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  317 LGKAKKVIVSKEDTTIVEGMGEKEALEARCESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of CX671659 vs. ExPASy Swiss-Prot
Match: CH60_CHLTA (60 kDa chaperonin OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=groL PE=2 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 4.116e-50
Identity = 102/206 (49.51%), Postives = 143/206 (69.42%), Query Frame = -2
Query:  196 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            LG A+KV + K+ TTI+     K+ ++AR   +KK++ ++ S YD EKL ER+AKLSGGVAVI+VGAATE E++++K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA                  GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  317 LGKAKKVIVSKEDTTIVEGMGEKEALEARCESIKKQIEDSSSDYDKEKLQERLAKLSGGVAVIRVGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
The following BLAST results are available for this feature:
BLAST of CX671659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_GEOKA3.152e-5052.9160 kDa chaperonin OS=Geobacillus kaustophilus GN=g... [more]
CH60_DESAA3.152e-5050.4960 kDa chaperonin OS=Desulfatibacillum alkenivoran... [more]
CH602_SYNAS3.152e-5051.9460 kDa chaperonin 2 OS=Syntrophus aciditrophicus (... [more]
CH601_PROM13.152e-5053.4060 kDa chaperonin 1 OS=Prochlorococcus marinus (st... [more]
CH60_STAHJ4.116e-5052.4360 kDa chaperonin OS=Staphylococcus haemolyticus (... [more]
CH60_HAHCH4.116e-5049.2860 kDa chaperonin OS=Hahella chejuensis (strain KC... [more]
CH60_EXISA4.116e-5051.4460 kDa chaperonin OS=Exiguobacterium sp. (strain A... [more]
CH60_CHLTR4.116e-5049.5160 kDa chaperonin OS=Chlamydia trachomatis GN=groL... [more]
CH60_CHLTB4.116e-5049.5160 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_CHLTA4.116e-5049.5160 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12D06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12D06-H12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671659 ID=CX671659; Name=CX671659; organism=Citrus sinensis; type=EST; length=817bp
TTTTTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTA
AAACTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAA
AACTCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTG
TGGCGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAG
CCTGAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCA
CATCTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTC
ATACTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCA
CCTTCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGT
GATGCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTC
ATCTGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGAT
GAACCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCA
AAAGTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTC
AGTTTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATT
TAGCAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCA
GCCAACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGA
TGCAGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTC
TAGCTGTACCTAGCTGC
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