CX671650

Overview
NameCX671650
Unique NameCX671650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_CHLMU (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia muridarum GN=zwf PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.146e-20
Identity = 57/180 (31.67%), Postives = 96/180 (53.33%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLK--EKEAGKLSNRLFYLSIPPNIFVDVAKCASL------RASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            + + GA+GDL  +K+FPAL+ L  E  L E+F   G+AR   + E+ R  + + +       E      +    R FYH   +S  E ++ L S L+  +++ G   NRLFYLS PP+ F ++ +  +          +   W+R+I+EKPFG D +++ EL + +   + E+ ++RIDH
Sbjct:   19 MVIFGATGDLTARKLFPALYNLTKEGRLSENFVCVGFARRPKSHEQFREEMRQAIQNFSHSSEIDIRVWESLEHRIFYHQANFSEAEGYSSLRSFLESVDQKYGTKGNRLFYLSTPPDYFQEIIRNLNRHQLFYHEQGAQQPWSRLIIEKPFGVDLQTAQELQQCIDANINEESVYRIDH 198          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_RHIME (Glucose-6-phosphate 1-dehydrogenase OS=Rhizobium meliloti GN=zwf PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.496e-20
Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = 1
Query:  298 VVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASS-ATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            V G +GDLA++K+ PAL+    E    E   + G +R  L+ +E R   S  L   +   E  E ++++F  R +Y S    SE+ + +L   L+E   GK   R FYL++ P IF D+++   +R     T  TR++VEKP GRD  S+ EL  ++ +  RE+QIFRIDH
Sbjct:   15 VFGGTGDLAERKLLPALYHRQMEGQFTEPTRIIGASRASLSHDEYRRFASDALKEHLKSGEFNEAEVEKFTSRLYYVSVDAKSEQGWDDLKKLLEE---GKDRTRAFYLAVGPAIFSDISE--KIRDHKLITRNTRIVVEKPIGRDLASATELNDTIGKVFREEQIFRIDH 180          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD3_SCHPO (Probable glucose-6-phosphate 1-dehydrogenase C7.13c OS=Schizosaccharomyces pombe GN=SPAC3C7.13c PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.496e-20
Identity = 59/178 (33.15%), Postives = 101/178 (56.74%), Query Frame = 1
Query:  286 LSITVVGASGDLAKKKIFPALFALYYEDCLPED-FTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSN---RLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            ++  V GASG+LA KK FPALF L+  + +    F V GYAR+K+   E R  I +++    + K+  +D    F+ R  Y SG Y     + E    L+  E    S+   R+FY+++PP+++V V+           G +R+++EKPFG++ +S+ +L   + ++ +E++I+RIDH
Sbjct:    2 VTFMVFGASGNLANKKTFPALFHLFKRNLVDRSSFYVLGYARSKIPIGEFRESIRESVKPDTESKQVFQD----FIDRVSYFSGQYDQSSSYVEFRKHLESVEKKADSSKALRIFYIALPPSVYVTVSSHI-YENLYLPGKSRLVIEKPFGKNYQSAVKLKEEVHKHWKEEEIYRIDH 174          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_CHLPN (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia pneumoniae GN=zwf PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.354e-20
Identity = 58/180 (32.22%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKE--KEAGKLSNRLFYLSIPPNIFVDVA------KCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            + + GA+GDL  +K+ PAL+ L  E  L + F   G+AR + ++E  R  + K    +    E      + F +R FYH   + +   +  L   L++  K  G   NRLFYLS PP  F  +       K           W+RVI+EKPFGRD +S+ +L + + + L E+ ++ IDH
Sbjct:   23 LVIFGATGDLTARKLLPALYHLTKEGRLSDQFVCVGFARREKSNELFRQEM-KQAVIQFSPSELDIKVWEDFQQRLFYHRSEFDNNMGYTSLKDSLEDLDKTYGTRGNRLFYLSTPPQYFSRIIENLNKHKLFYKNQDQGKPWSRVIIEKPFGRDLDSAKQLQQCINENLNENSVYHIDH 201          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_LEUME (Glucose-6-phosphate 1-dehydrogenase OS=Leuconostoc mesenteroides GN=zwf PE=1 SV=4)

HSP 1 Score: 97.8265 bits (242), Expect = 7.427e-20
Identity = 56/176 (31.82%), Postives = 95/176 (53.98%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKL---SNRLFYLSIPPNIFVDVAKCASLRASSA-TGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            +T  G +GDLAK+K++P++F LY +  L + F + G AR  L D+E + ++  ++    D +   E     F++   Y +   +    +A L   + E+ A K     NR+FY+S+ P  F  +AK        A TG+ R+++EKPFG   +++ EL   L+    ++Q+FRIDH
Sbjct:    9 VTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAE----AFIEHFSYRAHDVTDAASYAVLKEAI-EEAADKFDIDGNRIFYMSVAPRFFGTIAKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDH 179          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_SYNE7 (Glucose-6-phosphate 1-dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=zwf PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.267e-19
Identity = 61/185 (32.97%), Postives = 95/185 (51.35%), Query Frame = 1
Query:  268 EKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEA--GKLSNRLFYLSIPPNIFVDVAK---CASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            +KV     + + GA+GDL ++K+ PA++ ++ E  LP + T+ G AR   +D+  R  + + +  +       E+  + F +  F+  G     + +  L  RL   +   G   NR FYLS+ P  F + AK    A + A  A   TR++VEKPFGRD  S+  L   L+   RE QI+RIDH
Sbjct:   17 DKVPEPQILVIFGATGDLTQRKLVPAIYEMHLERRLPPELTIVGVARRDWSDDYFREHLRQGVE-QFGGGIQAEEVWNTFAQGLFFAPGNIDDPQFYQTLRDRLANLDELRGTRGNRTFYLSVAPRFFGEAAKQLGAAGMLADPAK--TRLVVEKPFGRDLSSAQVLNAILQNVCRESQIYRIDH 198          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_SARBU (Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=Sarcophaga bullata GN=ZW PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.267e-19
Identity = 55/154 (35.71%), Postives = 85/154 (55.19%), Query Frame = 1
Query:  346 LFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            L+ LY ++ LP+     GYAR+KLT  ++R    K +  +  +++  E+    F +   Y SG Y     F  L  +++  E   ++NR+FYL++PP++F  V         S  GW RVI+EKPFGRD  +S +L+  L     E+QI+RIDH
Sbjct:    1 LWWLYRDNLLPKPTKFCGYARSKLTTADIRKACEKFMKVQPHEQQRYEE----FWELNHYVSGSYDGRLGFEMLQQQMEIMENKGVANRVFYLALPPSVFNSVTVRIKEICLSKKGWNRVIIEKPFGRDDVTSKQLSDHLASLFDEEQIYRIDH 150          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_MYCTU (Glucose-6-phosphate 1-dehydrogenase OS=Mycobacterium tuberculosis GN=zwf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.161e-19
Identity = 54/186 (29.03%), Postives = 98/186 (52.69%), Query Frame = 1
Query:  271 KVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLT--CRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEA--GKLSNRLFYLSIPPNIFVDVAKC---ASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            ++     + + G +GDLA+KK+ PA++ L     LP  F++ G+AR   + ++   ++   +   CR   ++   D++ +  +   +  G +  ++ FA+L   L++ +A  G   N  FYL+IPP  F  V +    + L       W+RV++EKPFG D  S+ EL +++     E+ +FRIDH
Sbjct:   24 RIAGPCGMVIFGVTGDLARKKVMPAVYDLANRGLLPPTFSLVGFARRDWSTQDFGQVVYNAVQEHCRTPFRQQNWDRLAEGFR---FVPGTFDDDDAFAQLAETLEKLDAERGTGGNHAFYLAIPPKSFPVVCEQLHKSGLARPQGDRWSRVVIEKPFGHDLASARELNKAVNAVFPEEAVFRIDH 206          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_MYCBO (Glucose-6-phosphate 1-dehydrogenase OS=Mycobacterium bovis GN=zwf PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.161e-19
Identity = 54/186 (29.03%), Postives = 98/186 (52.69%), Query Frame = 1
Query:  271 KVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLT--CRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEA--GKLSNRLFYLSIPPNIFVDVAKC---ASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            ++     + + G +GDLA+KK+ PA++ L     LP  F++ G+AR   + ++   ++   +   CR   ++   D++ +  +   +  G +  ++ FA+L   L++ +A  G   N  FYL+IPP  F  V +    + L       W+RV++EKPFG D  S+ EL +++     E+ +FRIDH
Sbjct:   24 RIAGPCGMVIFGVTGDLARKKVMPAVYDLANRGLLPPTFSLVGFARRDWSTQDFGQVVYNAVQEHCRTPFRQQNWDRLAEGFR---FVPGTFDDDDAFAQLAETLEKLDAERGTGGNHAFYLAIPPKSFPVVCEQLHKSGLARPQGDRWSRVVIEKPFGHDLASARELNKAVNAVFPEEAVFRIDH 206          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_ANASP (Glucose-6-phosphate 1-dehydrogenase OS=Anabaena sp. (strain PCC 7120) GN=zwf PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.211e-19
Identity = 60/175 (34.29%), Postives = 92/175 (52.57%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKE--KEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWT-RVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            I + GASGDL  +K+ PAL+ L  E  +P + T+ G AR + + E  R  + K +       E  E   D F +  FY  G   + E + +L + L E  ++ G   NR+FYLS+ PN F +  K           +  R+++EKPFGRD  S+  L   +++Y +E Q++RIDH
Sbjct:   24 IVIFGASGDLTWRKLVPALYKLRRERRIPPETTIVGVARREWSHEYFREQMQKGMEEAHSSVELGELWQD-FSQGLFYCPGDIDNPESYQKLKNLLSELDEKRGTRGNRMFYLSVAPNFFPEAIKQLGGAGMLDDPYKHRLVIEKPFGRDLASAQSLNAVVQKYCKEHQVYRIDH 197          
The following BLAST results are available for this feature:
BLAST of CX671650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
G6PD_CHLMU1.146e-2031.67Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia m... [more]
G6PD_RHIME1.496e-2036.84Glucose-6-phosphate 1-dehydrogenase OS=Rhizobium m... [more]
G6PD3_SCHPO1.496e-2033.15Probable glucose-6-phosphate 1-dehydrogenase C7.13... [more]
G6PD_CHLPN4.354e-2032.22Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia p... [more]
G6PD_LEUME7.427e-2031.82Glucose-6-phosphate 1-dehydrogenase OS=Leuconostoc... [more]
G6PD_SYNE71.267e-1932.97Glucose-6-phosphate 1-dehydrogenase OS=Synechococc... [more]
G6PD_SARBU1.267e-1935.71Glucose-6-phosphate 1-dehydrogenase (Fragment) OS=... [more]
G6PD_MYCTU2.161e-1929.03Glucose-6-phosphate 1-dehydrogenase OS=Mycobacteri... [more]
G6PD_MYCBO2.161e-1929.03Glucose-6-phosphate 1-dehydrogenase OS=Mycobacteri... [more]
G6PD_ANASP8.211e-1934.29Glucose-6-phosphate 1-dehydrogenase OS=Anabaena sp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C12-F24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671650 ID=CX671650; Name=CX671650; organism=Citrus sinensis; type=EST; length=809bp
GCACATTTGAGTCCTTGCTCTTCTTCATCGAAGCATTACAAGACGCAACT
CTTTAGCGACTTCATTGTTGTCCCAAGAAAATCTTGTTTCTCCACTTGGG
TATCTCAAGTTCAGTCAAGAATCCATGCTAGAAAGCATTTTCAGCTCAAA
TCCTCTAATGGGCATCCTCTTAATGCTGTTTCTTTGCAAGATAGTTTAGC
TGGAAAACCTCTGGCCAACGATCATTCCGAGCCTCAAGAGATAGAGGCCT
CCGTTACTGCATCATCTGAAAAAGTGGGTTCTACACTCAGCATAACAGTT
GTTGGAGCCTCAGGAGACCTTGCAAAGAAGAAGATTTTTCCTGCACTTTT
CGCCCTATACTATGAAGACTGTCTACCTGAGGATTTTACAGTTTTTGGTT
ATGCTCGGACTAAATTGACTGATGAGGAGCTGAGGAACATGATTAGCAAA
ACTTTAACTTGTAGAATTGATAAGAAGGAAAATTGTGAAGACAAAATGGA
TCAGTTCTTGAAGAGATGCTTTTACCATTCCGGTCTGTACAGCTCTGAGG
AGCATTTTGCAGAATTAGACAGCAGATTGAAAGAGAAAGAGGCTGGAAAG
CTATCGAACAGGTTGTTTTACTTATCAATACCTCCAAACATTTTTGTGGA
TGTGGCGAAATGCGCTAGCCTTAGAGCTTCATCAGCAACTGGTTGGACAA
GAGTCATTGTTGAAAAACCATTTGGTCGGGACTCTGAGTCTTCTGGCGAG
TTAACTAGAAGTTTGAAGCAGTATCTAAGAGAGGATCAAATATTCAGGAT
TGACCATTA
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