CX671650

Overview
NameCX671650
Unique NameCX671650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_NOSP7 (Glucose-6-phosphate 1-dehydrogenase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=zwf PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.072e-18
Identity = 59/178 (33.15%), Postives = 95/178 (53.37%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCR---IDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKE--KEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWT-RVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            I + GASGDL  +K+ PAL+ L  E  +P + T+ G AR + + E  R  + K +      +D  E  +D    F +  FY  G   + E + +L + L E  ++ G   NR+FYLS+ P+ F +  K           +  R+++EKPFGRD  S+  L + +++Y +E Q++RIDH
Sbjct:   24 IVIFGASGDLTWRKLVPALYKLRRERRIPPETTIVGVARREWSHEYFREQMQKGMEEAHPDVDLGELWQD----FSQGLFYSPGDIDNPESYQKLKTLLSELDEKRGTRGNRMFYLSVAPSFFPEAIKQLGSGGMLEDPYKHRLVIEKPFGRDLASAQSLNQVVQKYCKEHQVYRIDH 197          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_TREPA (Glucose-6-phosphate 1-dehydrogenase OS=Treponema pallidum GN=zwf PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.401e-18
Identity = 51/176 (28.98%), Postives = 98/176 (55.68%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDS--RLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSAT--GWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            + + GASGDLA +K+ P+L+ L+ ++ LP  F + G  RT L+ E  R  +++ +T    +  +   ++ +FL++  Y S   +    FA+  +  R  ++      N +FYL+ PP+++  +    ++   +     + RV++EKPFG + E++  L  SL+ + +E+Q +RIDH
Sbjct:   15 LVIFGASGDLAARKLIPSLWDLFEQELLPRTFGILGAGRTALSTESFRARLAEAVTKHAVRTPHDPARLTEFLQKIHYFSFDPTDSVAFADFATYVRTLDQSLHTEGNFIFYLATPPSLYETIPTQLAMHHLNREQGNFRRVVIEKPFGYNLETAQHLNASLRAHFQENQTYRIDH 190          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PE_HUMAN (GDH/6PGL endoplasmic bifunctional protein OS=Homo sapiens GN=H6PD PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.322e-18
Identity = 61/191 (31.94%), Postives = 109/191 (57.07%), Query Frame = 1
Query:  265 SEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDC-LPEDFTVFGYARTKLTD-EELRNMISKTLTCRIDKK-ENCEDKMDQFLKRCFYHSGLYSSEEHFA---ELDSRLKE---KEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATG-WTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            ++++   +SI ++GA+GDLAKK ++  LF LY ++      F+  G A T     +EL     ++L+C  D    +C +  DQFL+   Y   L ++E++ A   +++++L+    +EAG    R+FY S+PP  + D+A+  +       G W RV++EKPFG D  S+ +L   L  + +E++++R+DH
Sbjct:   19 AQELQGHVSIILLGATGDLAKKYLWQGLFQLYLDEAGRGHSFSFHGAALTAPKQGQELMAKALESLSCPKDMAPSHCAEHKDQFLQLSQYRQ-LKTAEDYQALNKDIEAQLQHAGLREAG----RIFYFSVPPFAYEDIARNINSSCRPGPGAWLRVVLEKPFGHDHFSAQQLATELGTFFQEEEMYRVDH 204          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PE_RABIT (GDH/6PGL endoplasmic bifunctional protein OS=Oryctolagus cuniculus GN=H6PD PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.004e-16
Identity = 55/181 (30.39%), Postives = 104/181 (57.46%), Query Frame = 1
Query:  286 LSITVVGASGDLAKKKIFPALFALYYEDC-LPEDFTVFGYARTKLTD-EELRNMISKTLTCRIDKKEN-CEDKMDQFLKRCFYHSGLYSSEEHFA---ELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATG-WTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            +S+ ++GA+GDLAKK ++  LF L+ ++      F+  G A T     +EL     ++L+C  D   + C +   QFL+   Y   L ++E++ A   ++++++++ E  + + R+FY S+PP  + D+A+  +       G W RV++EKPFG D  S+ +L   L  + +E++++R+DH
Sbjct:    7 VSVILLGATGDLAKKYLWQGLFQLFLDEAGKGHSFSFHGAALTAPKQGQELMAKALESLSCPRDMAPSLCAELQAQFLRLSRYRQ-LKTAEDYQALGRDIEAQVQQ-EGLREAGRMFYFSVPPFAYADIARNINSSCRPGPGAWLRVVLEKPFGHDHLSAQQLATELGSFFQEEEMYRVDH 185          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.004e-16
Identity = 55/186 (29.57%), Postives = 98/186 (52.69%), Query Frame = 1
Query:  265 SEKVGSTLSITVVGASGDLAKKKIFPALFALYYEDC-LPEDFTVFGYARTKLTD-EELRNMISKTLTCRIDK-KENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKL-SNRLFYLSIPPNIFVDVAKCASLRASSATG-WTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            ++++   +SI ++GA+GDLAKK ++  LF LY ++      F+  G A T     ++L +   ++L+C  D     C++   QFL+   YH      +      D   + ++ G   + R+FY S+PP  + D+A+  +       G W RV+ EKPFG D  S+ +L   L  + +E++++R+DH
Sbjct:   16 AQELKGHVSIILLGATGDLAKKYLWQGLFQLYLDEAGKGHSFSFHGAALTAPQQGQKLMDKALESLSCPKDLVPSRCDELKGQFLQLSQYHQLKTVEDYQTLNKDIETQVQQDGLWEAGRIFYFSVPPFAYADIARNINSSCRPHPGAWLRVVFEKPFGHDHLSAQQLASELGSFFQEEEMYRVDH 201          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_BORBU (Glucose-6-phosphate 1-dehydrogenase OS=Borrelia burgdorferi GN=zwf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.093e-14
Identity = 52/181 (28.73%), Postives = 89/181 (49.17%), Query Frame = 1
Query:  268 EKVGSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAK-CASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            E+  S   I + G +G+L++KK+ P+LF L+   C+  +F V G++R   TD+E R  I  +L      +E  +  ++ FL    Y  G ++ +E +  L   L           ++YLS  P  +  +         S     +++++EKPFG   E++ +L   L    +EDQI+RIDH
Sbjct:    3 ERSVSNFDIVIFGVTGNLSRKKLIPSLFNLFKNKCI-SNFRVIGFSRKIFTDKEFRLYIKDSLW-----QEETDSLIEIFLNFFVYVFGDFNEKESYKNLFKFLDRSR-----ETIYYLSTSPAFYGPIINHLKKYFLSEKLTLSKIVLEKPFGSSLETAKKLNSLLYSAFKEDQIYRIDH 172          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_HELPY (Glucose-6-phosphate 1-dehydrogenase OS=Helicobacter pylori GN=zwf PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.570e-14
Identity = 55/172 (31.98%), Postives = 87/172 (50.58%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            + + GA+GDLA +K+F +L+ +Y       D  +    R +L++EE       TL C   +  + E K  +FL    Y      + + F EL      K A K    +FY SI P+ F   A+  +  A +    TR+I+EKP G D ++  E+ +S+  + +E+QIFRIDH
Sbjct:    6 LVLFGATGDLAMRKLFVSLYEIYTHYGFKNDSRIIASGRKELSNEEFL-----TLLCEKTQLHSRE-KGREFLAHISYLCVRLDNPKDFEELS-----KIATKNKPLIFYFSISPSFFATTAQHLAKNALNHAN-TRLILEKPLGHDLKTCKEIFQSISVFFKEEQIFRIDH 165          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_HELPJ (Glucose-6-phosphate 1-dehydrogenase OS=Helicobacter pylori J99 GN=zwf PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14
Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            + + GA+GDLA +K+F +L+ +Y       D  +    R +L++EE   ++ +          +  +K ++FL    Y      + + F EL      K A      +FY SI P+ F   A+  +  A +    TR+I+EKP G D ++  E+ +S+  + +E+QIFRIDH
Sbjct:    6 LVLFGATGDLAMRKLFVSLYEIYIHYGFKNDSRIIASGRKELSNEEFLALLCEKTQL------HSREKGEEFLTHISYLRVRLDNPKDFEELS-----KIATNNKPLIFYFSISPSFFATTAQNLAQNALNHAN-TRLILEKPLGHDLKTCKEIFQSISAFFKEEQIFRIDH 165          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_PSEAE (Glucose-6-phosphate 1-dehydrogenase OS=Pseudomonas aeruginosa GN=zwf PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.772e-13
Identity = 51/173 (29.48%), Postives = 87/173 (50.29%), Query Frame = 1
Query:  289 SITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            ++ + GA GDLA +K+FPAL+ L  E+ L  D  V   AR +    E    + + L   +  KE  +    +F +R  Y S  +   + +  L   + ++        + Y + P ++F  +  C +L A+     TRV++EKP G D ESS E+  ++ ++  E +I+RIDH
Sbjct:   10 TLALFGALGDLALRKLFPALYQLDRENLLHRDTRVLALARDEGAPAEHLATLEQRLRLAVPAKEWDDVVWQRFRERLDYLSMDFLDPQAYVGLREAVDDELP-----LVAYFATPASVFGGI--CENLAAAGLAERTRVVLEKPIGHDLESSREVNEAVARFFPESRIYRIDH 175          
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD_BUCAP (Glucose-6-phosphate 1-dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=zwf PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.722e-12
Identity = 47/174 (27.01%), Postives = 88/174 (50.57%), Query Frame = 1
Query:  292 ITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKK--ENCEDKMDQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAKCASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            + + G  GDLA++K+ PAL+ L     +  D  + G  R     E+   ++ K +   +++K  E    K+   L   F++  ++  + HF EL + L +K+    +  ++Y ++P N F  +      + +  +  +R+I+EKP G   E+S ++   + +Y  E QIFRIDH
Sbjct:   11 LVIFGTKGDLARRKLLPALYKLEKSQKIHPDTRIIGTGRADWNTEDYIKIVKKAIKMFLNEKIDEKIWKKLRSRLN--FFYIDVFQ-DLHFLELKNILNQKK----NIIIYYCAVPSNTFNAIFTGLG-KVNLNSFPSRIIIEKPLGVSLETSKKINNQIAKYFLESQIFRIDH 176          
The following BLAST results are available for this feature:
BLAST of CX671650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
G6PD_NOSP71.072e-1833.15Glucose-6-phosphate 1-dehydrogenase OS=Nostoc punc... [more]
G6PD_TREPA1.401e-1828.98Glucose-6-phosphate 1-dehydrogenase OS=Treponema p... [more]
G6PE_HUMAN5.322e-1831.94GDH/6PGL endoplasmic bifunctional protein OS=Homo ... [more]
G6PE_RABIT1.004e-1630.39GDH/6PGL endoplasmic bifunctional protein OS=Oryct... [more]
G6PE_MOUSE1.004e-1629.57GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
G6PD_BORBU2.093e-1428.73Glucose-6-phosphate 1-dehydrogenase OS=Borrelia bu... [more]
G6PD_HELPY3.570e-1431.98Glucose-6-phosphate 1-dehydrogenase OS=Helicobacte... [more]
G6PD_HELPJ7.953e-1429.07Glucose-6-phosphate 1-dehydrogenase OS=Helicobacte... [more]
G6PD_PSEAE1.772e-1329.48Glucose-6-phosphate 1-dehydrogenase OS=Pseudomonas... [more]
G6PD_BUCAP9.722e-1227.01Glucose-6-phosphate 1-dehydrogenase OS=Buchnera ap... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12C12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C12-F24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671650 ID=CX671650; Name=CX671650; organism=Citrus sinensis; type=EST; length=809bp
GCACATTTGAGTCCTTGCTCTTCTTCATCGAAGCATTACAAGACGCAACT
CTTTAGCGACTTCATTGTTGTCCCAAGAAAATCTTGTTTCTCCACTTGGG
TATCTCAAGTTCAGTCAAGAATCCATGCTAGAAAGCATTTTCAGCTCAAA
TCCTCTAATGGGCATCCTCTTAATGCTGTTTCTTTGCAAGATAGTTTAGC
TGGAAAACCTCTGGCCAACGATCATTCCGAGCCTCAAGAGATAGAGGCCT
CCGTTACTGCATCATCTGAAAAAGTGGGTTCTACACTCAGCATAACAGTT
GTTGGAGCCTCAGGAGACCTTGCAAAGAAGAAGATTTTTCCTGCACTTTT
CGCCCTATACTATGAAGACTGTCTACCTGAGGATTTTACAGTTTTTGGTT
ATGCTCGGACTAAATTGACTGATGAGGAGCTGAGGAACATGATTAGCAAA
ACTTTAACTTGTAGAATTGATAAGAAGGAAAATTGTGAAGACAAAATGGA
TCAGTTCTTGAAGAGATGCTTTTACCATTCCGGTCTGTACAGCTCTGAGG
AGCATTTTGCAGAATTAGACAGCAGATTGAAAGAGAAAGAGGCTGGAAAG
CTATCGAACAGGTTGTTTTACTTATCAATACCTCCAAACATTTTTGTGGA
TGTGGCGAAATGCGCTAGCCTTAGAGCTTCATCAGCAACTGGTTGGACAA
GAGTCATTGTTGAAAAACCATTTGGTCGGGACTCTGAGTCTTCTGGCGAG
TTAACTAGAAGTTTGAAGCAGTATCTAAGAGAGGATCAAATATTCAGGAT
TGACCATTA
back to top