CX671650

Overview
NameCX671650
Unique NameCX671650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD2_MYCTU (Probable glucose-6-phosphate 1-dehydrogenase OS=Mycobacterium tuberculosis GN=zwf2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 1 
Query:  277 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKM-DQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAK-CASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            G++  + + G +GDLA+K  F AL+ L     L  D  + G A    +D+     + K     I + E  +D + D+   R  Y  G  +  + +  L   +     G     L+YL +PP +F  + +  A++R        RV VEKPFG D  S+ EL   L+  L EDQI R+DH
Sbjct:    7 GASDLLVIFGITGDLARKMTFRALYRLERHQLL--DCPILGVA----SDDMSVGQLVKWARESIGRTEKIDDAVFDRLAGRLSYLHGDVTDSQLYDSLAELI-----GSACRPLYYLEMPPALFAPIVENLANVRLLERA---RVAVEKPFGHDLASALELNARLRAVLGEDQILRVDH 171
[Close]
BLAST of CX671650 vs. ExPASy Swiss-Prot
Match: G6PD2_MYCBO (Probable glucose-6-phosphate 1-dehydrogenase OS=Mycobacterium bovis GN=zwf2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 1 
Query:  277 GSTLSITVVGASGDLAKKKIFPALFALYYEDCLPEDFTVFGYARTKLTDEELRNMISKTLTCRIDKKENCEDKM-DQFLKRCFYHSGLYSSEEHFAELDSRLKEKEAGKLSNRLFYLSIPPNIFVDVAK-CASLRASSATGWTRVIVEKPFGRDSESSGELTRSLKQYLREDQIFRIDH 807
            G++  + + G +GDLA+K  F AL+ L     L  D  + G A    +D+     + K     I + E  +D + D+   R  Y  G  +  + +  L   +     G     L+YL +PP +F  + +  A++R        RV VEKPFG D  S+ EL   L+  L EDQI R+DH
Sbjct:    7 GASDLLVIFGITGDLARKMTFRALYRLERHQLL--DCPILGVA----SDDMSVGQLVKWARESIGRTEKIDDAVFDRLAGRLSYLHGDVTDSQLYDSLAELI-----GSACRPLYYLEMPPALFAPIVENLANVRLLERA---RVAVEKPFGHDLASALELNARLRAVLGEDQILRVDH 171
The following BLAST results are available for this feature:
BLAST of CX671650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
G6PD2_MYCTU8.230e-1130.73Probable glucose-6-phosphate 1-dehydrogenase OS=My... [more]
G6PD2_MYCBO8.230e-1130.73Probable glucose-6-phosphate 1-dehydrogenase OS=My... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C12-F24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671650 ID=CX671650; Name=CX671650; organism=Citrus sinensis; type=EST; length=809bp
GCACATTTGAGTCCTTGCTCTTCTTCATCGAAGCATTACAAGACGCAACT
CTTTAGCGACTTCATTGTTGTCCCAAGAAAATCTTGTTTCTCCACTTGGG
TATCTCAAGTTCAGTCAAGAATCCATGCTAGAAAGCATTTTCAGCTCAAA
TCCTCTAATGGGCATCCTCTTAATGCTGTTTCTTTGCAAGATAGTTTAGC
TGGAAAACCTCTGGCCAACGATCATTCCGAGCCTCAAGAGATAGAGGCCT
CCGTTACTGCATCATCTGAAAAAGTGGGTTCTACACTCAGCATAACAGTT
GTTGGAGCCTCAGGAGACCTTGCAAAGAAGAAGATTTTTCCTGCACTTTT
CGCCCTATACTATGAAGACTGTCTACCTGAGGATTTTACAGTTTTTGGTT
ATGCTCGGACTAAATTGACTGATGAGGAGCTGAGGAACATGATTAGCAAA
ACTTTAACTTGTAGAATTGATAAGAAGGAAAATTGTGAAGACAAAATGGA
TCAGTTCTTGAAGAGATGCTTTTACCATTCCGGTCTGTACAGCTCTGAGG
AGCATTTTGCAGAATTAGACAGCAGATTGAAAGAGAAAGAGGCTGGAAAG
CTATCGAACAGGTTGTTTTACTTATCAATACCTCCAAACATTTTTGTGGA
TGTGGCGAAATGCGCTAGCCTTAGAGCTTCATCAGCAACTGGTTGGACAA
GAGTCATTGTTGAAAAACCATTTGGTCGGGACTCTGAGTCTTCTGGCGAG
TTAACTAGAAGTTTGAAGCAGTATCTAAGAGAGGATCAAATATTCAGGAT
TGACCATTA
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