CX671646

Overview
NameCX671646
Unique NameCX671646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.400e-14
Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 3
Query:  411 LPIPPSKEKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            L I   + +G S      +S    L    +K+FT+ EL  AT NF   + +G+GG+G VYKG +          GSG VVA+K+ +    QG KE+LTE+  L +LHH NLV L
Sbjct:  581 LIIMRKRMRGYSAVARRKRSSKASLKIEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTL----------GSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSL 684          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  471 EGEILSSSNLK--AFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            E E L   +L+  +FT  ++K AT NF P++ +GEGGFG VYKG +            GM +AVK+L  +  QG++E++TE+  +  L HPNLVKL
Sbjct:  641 ENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVL----------ADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKL 726          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 3
Query:  471 EGEILSSSNLK--AFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            E E L   +L+  +FT  ++K AT NF P++ +GEGGFG VYKG +            GM +AVK+L  +  QG++E++TE+  +  L HPNLVKL
Sbjct:  643 ENEELRGLDLQTGSFTLKQIKRATNNFDPENKIGEGGFGPVYKGVL----------ADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKL 728          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 3
Query:  495 NLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            +LK F+F E++TAT NF P ++LG+GGFG VYKG++           +G VVAVK+LK   + G  ++ TEV  +G   H NL++L
Sbjct:  284 HLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLP----------NGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRL 359          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.963e-12
Identity = 41/90 (45.56%), Postives = 52/90 (57.78%), Query Frame = 3
Query:  483 LSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            ++    + FTF EL  AT NFR D  LGEGGFG V+KG I++            VVA+K+L   G QG +E++ EV  L    HPNLVKL
Sbjct:   83 VTGKKAQTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEK---------LDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKL 163          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 3
Query:  426 SKEKGNSESLPTPKSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            ++E    +  P PK     ++  ++K + F EL +AT +F   S +G GG+G VYKG +         PG G+VVAVK+ +    QG KE+ TE+  L +LHH NLV L
Sbjct:  595 TREVDMEQEHPLPKPP---MNMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHL---------PG-GLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSL 690          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 3
Query:  498 LKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            + +F+  ++K AT NF   + +GEGGFG VYKG          K   G ++AVK+L     QG++E+L E+  +  LHHPNLVKL
Sbjct:  609 IASFSLRQIKIATNNFDSANRIGEGGFGPVYKG----------KLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKL 683          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.276e-11
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 3
Query:  507 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            FT  ++K AT +F P + +GEGGFG V+KG +            G VVAVK+L  +  QG++E+L E+  +  L HPNLVKL
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVL----------ADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKL 740          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 3
Query:  465 KSEGEILSSSNLKAFTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKP-EGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            K E  +L   NL++FTF EL  AT  F   S+LG GGFG VY+G          K G G VVAVK+LK   G  G+ ++ TE+  +    H NL++L
Sbjct:  273 KQEEGLLGLGNLRSFTFRELHVATDGFSSKSILGAGGFGNVYRG----------KFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRL 359          
BLAST of CX671646 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.533e-11
Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 3
Query:  507 FTFNELKTATRNFRPDSLLGEGGFGFVYKGWIDQHSLSPAKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL 752
            FT  ++K AT NF     +GEGGFG VYKG + +          G ++AVK+L  +  QG++E++ E+  +  L HPNLVKL
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSE----------GKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKL 737          
The following BLAST results are available for this feature:
BLAST of CX671646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
Y1684_ARATH5.400e-1439.47Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH2.052e-1342.71Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH2.052e-1342.71Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH1.018e-1244.19Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH2.963e-1245.56Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5374_ARATH5.055e-1238.53Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH1.471e-1142.35Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH3.276e-1143.90Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH7.299e-1142.27Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH9.533e-1141.46Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C10-F20-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671646 ID=CX671646; Name=CX671646; organism=Citrus sinensis; type=EST; length=753bp
CAGGCTTCTGCTTCTTCCTCTTCGTTTCCTTAGCGCCGATTATTACTTTT
ATCTGCCTAATCTTATCTTATCATCATCGATTGGCCCACTCGACTAACCA
AACTGCACGTTGTGAAAAACCAACTTCAAAACCGAAGACACTTGAAAGCT
TCTTGTTAGTTTCCTCTTACTTAGAATCGTTTTAGTCGGTGCTACATTTA
TTTAAAAATTACAACCAGCTGAACGAACAAAAGAAAGAGTTTTTTTTTTT
GGTTTTTCAAAAAAGACAAAGCATATTTTAAGTACGAAGAAATATGGGAA
ACTGTTTACAGCATTCTTCAGCTAGAGTGGATTCCACCCAGAGCCCCCGC
GCTACTTCTGGAGCCTCAAGAATTTCCACTAGATCTAGTCATTCTTCTGC
CCCTTCCACCCTTCCCATTCCACCTTCAAAAGAAAAAGGCAATTCTGAAA
GTCTTCCAACTCCAAAGTCTGAGGGTGAAATATTGTCGTCCTCAAATTTG
AAAGCCTTCACATTCAATGAGCTCAAGACTGCCACCAGAAACTTCCGTCC
TGACAGTCTTCTCGGCGAAGGTGGATTTGGTTTTGTTTACAAAGGATGGA
TTGATCAACACTCACTTTCACCTGCTAAGCCTGGATCAGGAATGGTCGTT
GCTGTCAAGAAGCTTAAGCCTGAAGGTTTCCAAGGACACAAGGAGTGGTT
GACAGAAGTTAATTATCTTGGCCAGCTTCATCATCCAAATCTGGTTAAGC
TAA
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