CX671645

Overview
NameCX671645
Unique NameCX671645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13594 contig Csv1_Contig13594:416..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 45/143 (31.47%), Postives = 77/143 (53.85%), Query Frame = -2
Query:  388 RTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQ----CLNNEPKLRPRMSEVLAMLERL----EAPKNSAKLSQSEP 792
            R+ V+   +GT GY +PE   +G +T +SD+YSFG+VLLE+L+G+  V  T+   ++ +V W K  L  + ++  +++  L    P+ +      L ++    C   +P  RP MS+V+ MLE      + P ++   SQ  P
Sbjct:  997 RSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPVMFTQ---DEDIVKWVKKQL-QRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCTATDPLDRPTMSDVVFMLEGCRVGPDVPSSADPTSQPSP 1135          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  388 TQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRM-SEVLAMLERL----EAPKNSAKLSQSEP 777
            T  +GT  Y  PEY  TGR++ KSDVY+FG+++L+LL+G+ A+  T   +E ++ +      ++  +L +I+D K  G +P +     A LALQC     K RP +  ++L +LE L    +  +NS   + S+P
Sbjct:  623 TSPVGTLCYIDPEYQRTGRISPKSDVYAFGMIILQLLTGQQAMALTYT-VETAMEN------NNDDELIQILDEK-AGNWPIEETRQLAALALQCTELRSKDRPDLEDQILPVLESLKKVADKARNSLSAAPSQP 749          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.180e-11
Identity = 43/123 (34.96%), Postives = 66/123 (53.66%), Query Frame = -2
Query:  439 DRTHVST-QVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKV-GIEQSLVD--WAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAML 795
            ++T  +T +V+GT GY  PEYVA G+ + KSDVYSFGV++LE++ G+      ++ G   +LV   W    L +   L  ++D  +G  Y +        + L C+   P  RP MS +  ML
Sbjct:  516 NQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWR---LRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRML 635          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11
Identity = 42/114 (36.84%), Postives = 59/114 (51.75%), Query Frame = -2
Query:  439 STQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAML 780
            +T V+GT GY APE    G+ ++ SDV++FGV+LLE++SGR   D         L DW    L  + ++   +D +LG  Y    A  A  + L C +  P  RP M  VL  L
Sbjct:  523 TTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTF----FLADWVME-LHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYL 631          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: IRAK4_MOUSE (Interleukin-1 receptor-associated kinase 4 OS=Mus musculus GN=Irak4 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 43/125 (34.40%), Postives = 76/125 (60.80%), Query Frame = -2
Query:  424 RTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQ--KAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEA 792
            +T ++++++GT  Y APE +  G +T KSD+YSFGVVLLEL++G  AVD+ +    Q L+D  +    +++ +    D K+    P   +A ++AA+   QCL+ +   RP +++V  +L+ + A
Sbjct:  341 QTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLELITGLAAVDENRE--PQLLLDIKEEIEDEEKTIEDYTDEKMSDADPASVEAMYSAAS---QCLHEKKNRRPDIAKVQQLLQEMSA 459          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.856e-11
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = -2
Query:  370 DRTHVSTQ-VMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIE-QSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE----RLEAPKNSAKLSQSEPHRQTGP 795
            D+T   T+ V+GT+GY +PEY   G+ + KSDVYSFGV++LE++SGR      ++     +LV +     SD   L  ++D+     Y +        +AL C+  + + RP MS ++ ML      L  P+      +S  H Q GP
Sbjct:  493 DQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPL-DLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSSIALAVPQPPGFFFRSN-HEQAGP 638          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.342e-11
Identity = 43/135 (31.85%), Postives = 74/135 (54.81%), Query Frame = -2
Query:  394 HVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVD---WAKPYLSDKRKLFRIMDTK-LGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQS 786
            ++ T    T GY APE + T R++ +SDVYSFGVV+LE+L+G+  + +  +  E+ ++D   W +  + ++     + D + L  Q  ++       LAL C+   P+ RP+M EV  M+E +     S +L Q+
Sbjct:  495 NLPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPLTQPGLEDERVVIDLPRWVRSVVREEWTA-EVFDVELLKFQNIEEEMVQMLQLALACVARNPESRPKMEEVARMIEDVRRLDQSQQLQQN 628          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 41/118 (34.75%), Postives = 70/118 (59.32%), Query Frame = -2
Query:  430 VSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERL 783
            +ST V G+ GY  PEY +T ++  KSDVYS GVVLLE+++G+ A+  +K   +  + D  +  L++   +  I+D +L  +Y   +A   + +AL C  +    RP MS+V+  L+++
Sbjct:  730 ISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAIASSKTE-KVHISDHVRSILAN-GDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQI 845          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 47/137 (34.31%), Postives = 73/137 (53.28%), Query Frame = -2
Query:  424 DRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLS-------------DKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEA 795
            D T  +  V GT GY APE       + +SDVYS+GVVLLEL++G+ A+D++    + ++V W +  LS             D + +  ++DTKL     ++ A     LAL+C +  P+ RP M +V+  L  LE+
Sbjct:  948 DSTVSTATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRS-FPEDINIVSWVRSVLSSYEDEDDTAGPIVDPKLVDELLDTKL-----REQAIQVTDLALRCTDKRPENRPSMRDVVKDLTDLES 1078          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11
Identity = 39/114 (34.21%), Postives = 64/114 (56.14%), Query Frame = -2
Query:  439 TQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSG-RCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAML 777
            + + GT GY APEY++ GRL+ K D YSFGV++LE+ SG R    ++   +E  +    K + S+K +   ++D  +G    ++       + L C    P+LRP MS+V+ M+
Sbjct:  494 SSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWKCFASNKME--EMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMV 605          
The following BLAST results are available for this feature:
BLAST of CX671645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
Y4361_ARATH2.180e-1131.47Probable LRR receptor-like serine/threonine-protei... [more]
PUB53_ARATH2.180e-1134.81Putative U-box domain-containing protein 53 OS=Ara... [more]
CRK21_ARATH2.180e-1134.96Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
LRKA2_ARATH3.718e-1136.84Lectin-domain containing receptor kinase A4.2 OS=A... [more]
IRAK4_MOUSE4.856e-1134.40Interleukin-1 receptor-associated kinase 4 OS=Mus ... [more]
CRK5_ARATH4.856e-1133.11Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y5516_ARATH6.342e-1131.85Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
SIRK_ARATH8.284e-1134.75Senescence-induced receptor-like serine/threonine-... [more]
PEPR2_ARATH8.284e-1134.31Leucine-rich repeat receptor-like protein kinase P... [more]
CRK43_ARATH8.284e-1134.21Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C10-F20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671645 ID=CX671645; Name=CX671645; organism=Citrus sinensis; type=EST; length=811bp
CTTTGGGTCAGCACCACAAGCAGAAAAATCATTTGCTCATTCAAAACGAA
AGGATGTGTAACGACAACAAAAAGAAACATTTATATCTGGGCTATTGATA
CATATACAGCAGGAAAACGACATATCATCAAGAAACAAAAAGGCCTATGA
CAATTTTCAGTACTATTCACTCAAAACTGCATCAGAAGACACATCCATAC
AATATTTATTTTGACAACTGGCAAGAAGGCATTTAAGAAATTTACAAAAA
AGATGCTTCTCGGTTCATCTTACTCGTGGAGATTGCCGGTGTGATGGCAA
TGGCGATGCAGTTGGTGTCATATTCAGAGGAGAACGCTGCTGCCTCATTG
GTGACTTGCGTACTGTAACTGGGCCAGTCTGCCTATGTGGTTCAGACTGG
GAGAGTTTGGCTGAATTTTTGGGAGCTTCAAGTCGCTCTAGCATTGCTAA
AACCTCAGACATCCGAGGCCTAAGTTTAGGTTCGTTATTTAAGCACTGTA
AGGCAAGGGTAGCAGCTGTATGGGCTGCTTTCTGGGGGTACTGGCCTCCC
AACTTGGTGTCCATGATGCGAAATAATTTCCTTTTGTCAGACAAATATGG
TTTTGCCCAGTCTACTAGACTCTGCTCAATACCAACTTTTGTTTTATCTA
CAGCACATCGCCCAGACAATAGTTCAAGCAATACAACTCCGAAGCTGTAG
ACATCACTTTTAGCTGTAAGCCGACCTGTAGCAACATATTCAGGTGCTGC
ATAGCCATGAGTACCCATAACTTGGGTGGAAACATGAGTCCTATCACCAG
TGGGCCCAGCC
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