CX671645

Overview
NameCX671645
Unique NameCX671645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length811
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13594 contig Csv1_Contig13594:416..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.079e-18
Identity = 49/120 (40.83%), Postives = 77/120 (64.17%), Query Frame = -2
Query:  436 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 789
            +HV+T V GT G+ APEY++TG+ + K+DV+ +GV+LLEL++G+ A D  ++  +    L+DW K  L +K KL  ++D +L G+Y +        +AL C  +    RP+MSEV+ MLE
Sbjct:  432 SHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEK-KLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE 550          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.079e-18
Identity = 49/120 (40.83%), Postives = 77/120 (64.17%), Query Frame = -2
Query:  436 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 789
            +HV+T V GT G+ APEY++TG+ + K+DV+ +GV+LLEL++G+ A D  ++  +    L+DW K  L +K KL  ++D +L G+Y +        +AL C  +    RP+MSEV+ MLE
Sbjct:  451 SHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEK-KLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLE 569          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.079e-18
Identity = 49/120 (40.83%), Postives = 75/120 (62.50%), Query Frame = -2
Query:  436 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 789
            THV+T V GT G+ APEY++TG+ + K+DV+ +G++LLEL++G+ A D  ++  +    L+DW K  L +K KL  ++D  L   Y +        +AL C  + P  RP+MSEV+ MLE
Sbjct:  462 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 580          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.079e-18
Identity = 49/120 (40.83%), Postives = 75/120 (62.50%), Query Frame = -2
Query:  436 THVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQS--LVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 789
            THV+T V GT G+ APEY++TG+ + K+DV+ +G++LLEL++G+ A D  ++  +    L+DW K  L +K KL  ++D  L   Y ++       +AL C    P  RP+MSEV+ MLE
Sbjct:  459 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLE 577          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y1756_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07560 OS=Arabidopsis thaliana GN=At1g07560 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18
Identity = 54/131 (41.22%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  412 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNS 804
            P GD +HVST V GT GY   EY  T RL+ KSDVYSFGVVLLE+++ +  +D  +      + +W K  L+ +  +  IMD KL G Y   +A  A  LA+ C+N     RP MS V+  L+     +N+
Sbjct:  718 PIGDESHVSTLVAGTFGYLDHEYYQTNRLSEKSDVYSFGVVLLEIITNKPVIDHNR--DMPHIAEWVKLMLT-RGDISNIMDPKLQGVYDSGSAWKALELAMTCVNPSSLKRPNMSHVVHELKECLVSENN 845          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18
Identity = 54/119 (45.38%), Postives = 70/119 (58.82%), Query Frame = -2
Query:  430 HVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERL 786
            H ++Q +G  GY APE       T KSDVYSFGVV+LELL+GR   D  +   EQSLV WAKP L D   L  ++D  L G Y  ++  + A +   C+  EP LRP +S V+  L+RL
Sbjct:  569 HRTSQNLGV-GYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYDSGRPKAEQSLVRWAKPQLKDMDTLDEMVDPALCGLYAPESVSSFADIVSICVMTEPGLRPPVSNVVEALKRL 686          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.405e-18
Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = -2
Query:  436 GPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLE 807
            GPT D THVST V G+ GY  PEY    +LT KSDVYSFGVVL E L  R A++ T    + SL +WA PY   K  L +I+D  L G+   +     A  A++C+ ++   RP M +VL  LE
Sbjct:  686 GPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWA-PYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLE 808          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.102e-18
Identity = 55/140 (39.29%), Postives = 74/140 (52.86%), Query Frame = -2
Query:  385 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKLSQSEPH 804
            P    +HVST V GT GY  PEY  T  L+ KSDVYSFGVVLLE+++ +   DKT+      + +W    L+ K  +  I+D KL G Y    A     LAL C+N     RP M+ V+  L    A +N+ +  + E H
Sbjct:  716 PVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRE--RTHINEWVGSMLT-KGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTELNECVALENARRQGREEMH 852          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.102e-18
Identity = 56/118 (47.46%), Postives = 67/118 (56.78%), Query Frame = -2
Query:  403 GYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAKL 756
            GY APE       T KSDVYSFGVV+LELL+GR   D  K   E+SLV WA P L D   L  I D  L G YP K+    A +   C+  EP+ RP MSEV+  L R+   ++S KL
Sbjct:  567 GYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFDGEKPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRPPMSEVVEALVRM-VQRSSMKL 683          
BLAST of CX671645 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.357e-18
Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = -2
Query:  406 PTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRCAVDKTKVGIEQSLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKAAHTAATLALQCLNNEPKLRPRMSEVLAMLERLEAPKNSAK 804
            P G  THVST V GT GY  PEY  T RL  KSDVYSFG+VLLE+++ R  + +T+   +  +  W   Y+  K  +  ++D +L   Y   +   A  +A+ C+N   + RP MS+V   L++    +NS +
Sbjct:  724 PVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTRE--KPHIAAWV-GYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELKQCLTLENSKR 853          
The following BLAST results are available for this feature:
BLAST of CX671645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
SERK5_ARATH1.079e-1840.83Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH1.079e-1840.83Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK2_ARATH1.079e-1840.83Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH1.079e-1840.83Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
Y1756_ARATH2.405e-1841.22Probable LRR receptor-like serine/threonine-protei... [more]
SRF4_ARATH2.405e-1845.38Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
FERON_ARATH2.405e-1845.16Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
Y5188_ARATH4.102e-1839.29Probable LRR receptor-like serine/threonine-protei... [more]
SRF5_ARATH4.102e-1847.46Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
Y2289_ARATH5.357e-1837.59Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C10-F20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671645 ID=CX671645; Name=CX671645; organism=Citrus sinensis; type=EST; length=811bp
CTTTGGGTCAGCACCACAAGCAGAAAAATCATTTGCTCATTCAAAACGAA
AGGATGTGTAACGACAACAAAAAGAAACATTTATATCTGGGCTATTGATA
CATATACAGCAGGAAAACGACATATCATCAAGAAACAAAAAGGCCTATGA
CAATTTTCAGTACTATTCACTCAAAACTGCATCAGAAGACACATCCATAC
AATATTTATTTTGACAACTGGCAAGAAGGCATTTAAGAAATTTACAAAAA
AGATGCTTCTCGGTTCATCTTACTCGTGGAGATTGCCGGTGTGATGGCAA
TGGCGATGCAGTTGGTGTCATATTCAGAGGAGAACGCTGCTGCCTCATTG
GTGACTTGCGTACTGTAACTGGGCCAGTCTGCCTATGTGGTTCAGACTGG
GAGAGTTTGGCTGAATTTTTGGGAGCTTCAAGTCGCTCTAGCATTGCTAA
AACCTCAGACATCCGAGGCCTAAGTTTAGGTTCGTTATTTAAGCACTGTA
AGGCAAGGGTAGCAGCTGTATGGGCTGCTTTCTGGGGGTACTGGCCTCCC
AACTTGGTGTCCATGATGCGAAATAATTTCCTTTTGTCAGACAAATATGG
TTTTGCCCAGTCTACTAGACTCTGCTCAATACCAACTTTTGTTTTATCTA
CAGCACATCGCCCAGACAATAGTTCAAGCAATACAACTCCGAAGCTGTAG
ACATCACTTTTAGCTGTAAGCCGACCTGTAGCAACATATTCAGGTGCTGC
ATAGCCATGAGTACCCATAACTTGGGTGGAAACATGAGTCCTATCACCAG
TGGGCCCAGCC
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