CX671641

Overview
NameCX671641
Unique NameCX671641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX671641_ssr112 microsatellite CX671641_ssr112:112..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5079 contig Csv1_Contig5079:1..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.082e-64
Identity = 125/207 (60.39%), Postives = 146/207 (70.53%), Query Frame = -3
Query:  232 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 852
            QAVALRVG+D +VVYRC++ GYQD+LY  S RQFYRE DI GTVDFIFGN+AVV Q C + +RK  + Q N +TAQ R DPNQNTGISIH+C +          GS  TYLGRPWK YSR V M +++   I P GW  W+ +FAL TLYYGE+ NSGPGS+V  RV W GY    + TEA  FTVS FI G+SWLPSTGV F  GL
Sbjct:  332 QAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.845e-64
Identity = 120/204 (58.82%), Postives = 147/204 (72.06%), Query Frame = -3
Query:  244 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 855
            HQAVALR  +D +V YRC++ GYQDTLYVHS RQF+RECDIYGTVDFIFGNAA VLQ C I+AR P     NTITAQ+R +PNQ TGI IH+  +  AP +Q   G + TYLGRPW+ Y+R V + TY+   I+P GW++W+   AL TLYYGEY NSGPGS   +RV W G+ VI+   EA +FT+ +FI  +SWLP T V F
Sbjct:  270 HQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVIHNSVVKGAPGVQL--GGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPF 470          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.410e-64
Identity = 116/204 (56.86%), Postives = 147/204 (72.06%), Query Frame = -3
Query:  244 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAF 855
            HQAVAL V AD +V Y+C +  +QDT+Y H+ RQFYR+C I GTVDFIFGNAAVV QKC I  R+PM  Q+NTITAQ RKDPNQNTGISIH+C++    +L      I T+LGRPWK +S  V M ++M   I P+GWL W GD A DT++Y EY+NSGPG++  +RV+W G +   +  EA+KFTV  FI G++WLP+T V F
Sbjct:  361 HQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLT----DIQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPF 560          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.368e-64
Identity = 116/208 (55.77%), Postives = 147/208 (70.67%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVALR  +D +V Y C+  GYQDTLY+HS+RQF R C+IYGTVDFIFG+A  +LQ C IYARKPM+ QKNTITAQ+RK+P++ TG  I   ++  A +         TYLGRPW+ +SR V+M   +G  + P GWL W+G FAL TLYYGEY N+G G++V  RV+WPGY VI + TEA KFTV  F+ G+ W+ +TGV    GL
Sbjct:  356 HQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASE---------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.562e-63
Identity = 115/209 (55.02%), Postives = 145/209 (69.38%), Query Frame = -3
Query:  232 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW--NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 852
            QAVALR  +D ++ Y+C++ GYQDTL VHS RQFYREC IYGTVDFIFGNAA V Q C I  R+P+  Q N ITAQ R DP QNTGISIH+  +  APDL+   G++ TY+GRPW  +SR V + TY+ + + P GW  W     F LDTL+Y EY N+GP S+   RV W G+ V+  A++AS FTV +FI G++WLP TG+ F  GL
Sbjct:  328 QAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.322e-62
Identity = 118/209 (56.46%), Postives = 143/209 (68.42%), Query Frame = -3
Query:  232 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW--NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 852
            QAVA+R  +D +V YR  + G+QDTLY+HS RQF+REC I GT+DFIFGNAAVV Q C I  R+P+  Q N ITAQ R DP QNTGI+IH   + AA DL+    +  TYLGRPW+ YSRV  M TY+ + I P GW  W    +FAL+T++YGEY N GPGS+   RVRW G+  ITS   AS+FTV   I G SWLP+TGV F  GL
Sbjct:  386 QAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL 594          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.946e-62
Identity = 118/208 (56.73%), Postives = 142/208 (68.27%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVAL V AD    YRC +  YQDTLYVH+ RQFYREC I GTVDFIFGN+A VLQ C I  R+PM  Q+NTITAQ R DPN NTGISIH C++    DL      + T+LGRPWK +S  V M +Y+   I  +GWL W GD A DT++YGEY N+GPG++  +RV+W G R + S  EA++FTV  FI G  WLP+T V F  GL
Sbjct:  359 HQAVALMVSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLT----DVMTFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFL-STKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.119e-61
Identity = 114/209 (54.55%), Postives = 143/209 (68.42%), Query Frame = -3
Query:  232 QAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEW--NGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 852
            QAVALR  +D ++ YRC++ GYQDTL VHS RQFYREC IYGTVDFIFGNAAVV Q C I  R P+  Q N ITAQ R D  QNTGISIH+  +  APDL+    S+ TY+GRPW +YSR V + TY+   + P GW  W     + LDTL+Y EY N GP S+   RVRW G+ V++ A++AS F+V +FI G++WLP +G+ F   L
Sbjct:  332 QAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFTSEL 540          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.254e-61
Identity = 112/208 (53.85%), Postives = 143/208 (68.75%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVALRV AD   +YRC + GYQDTLY HS RQFYRECDIYGT+D+IFGNAAVV Q C I ++ PM  Q   ITAQ+R   +++TGIS+ +CS+ A+ DL  S   + +YLGRPW+ +SR V M +Y+ + I   GW +WNG  ALDTLYYGEY N+GPGS    RV WPG+ ++    +A  FT ++FI G  WL ST   +  G+
Sbjct:  341 HQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of CX671641 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.787e-59
Identity = 105/208 (50.48%), Postives = 138/208 (66.35%), Query Frame = -3
Query:  232 HQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITAQNRKDPNQNTGISIHDCSLYAAPDLQASKGSIPTYLGRPWKLYSRVVYMLTYMGDHIQPRGWLEWNGDFALDTLYYGEYMNSGPGSAVGHRVRWPGYRVITSATEASKFTVSQFIYGSSWLPSTGVAFLGGL 855
            HQAVA+RV AD ++ Y C   GYQDTLY HS+RQFYR+C I GT+DF+FG+AA V Q C +  RKP+  Q   ITA  RKDP ++TG  +  C++   PD  A K    TYLGRPWK YSR + M T++ D + P GW  W G+F L+TL+Y E  N+GPG+A+  RV WPG + + S  E  KFT +Q+I G +W+P  GV ++ GL
Sbjct:  356 HQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKL-SDEEILKFTPAQYIQGDAWIPGKGVPYILGL 562          
The following BLAST results are available for this feature:
BLAST of CX671641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME35_ARATH1.082e-6460.39Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME38_ARATH1.845e-6458.82Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME46_ARATH2.410e-6456.86Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME6_ARATH5.368e-6455.77Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME59_ARATH1.562e-6355.02Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME33_ARATH1.322e-6256.46Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME24_ARATH2.946e-6256.73Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME60_ARATH1.119e-6154.55Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME12_ARATH4.254e-6153.85Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME28_ARATH1.787e-5950.48Putative pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12C08-F16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671641 ID=CX671641; Name=CX671641; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTAAAGACCGTCACAAATATTATTACTTATTACAACATCAAGACG
AAAAAAATGAAACCAGAAAATTATACAATTGCGAAAGAAATATTTAGAAT
TTAACCTCCCCGTGTGTGTGTGTGCATGCAGTAAGTAAAATTCCATTTGA
TCCTTCCAACACTCATGAGACCCACCTATATATAATAAGTATACGTACTA
AAAAGTTAAATTAAAATTCACTTTAAACCGAAAGCCCACCCAAGAAAGCC
ACCCCAGTCGACGGCAGCCACGACGACCCGTAGATAAACTGCGACACAGT
GAATTTACTTGCCTCCGTCGCCGACGTTATAACCCGGTAACCCGGCCACC
TCACCCGGTGCCCCACGGCCGAACCCGGGCCGGAGTTCATGTACTCGCCG
TAGTATAAAGTATCCAGTGCAAAGTCTCCATTCCATTCAAGCCAGCCTCT
GGGTTGGATGTGGTCACCCATGTACGTTAACATGTACACAACCCTCGAGT
AGAGCTTCCACGGCCGGCCTAGGTACGTGGGGATGCTGCCTTTCGAGGCC
TGAAGATCGGGGGCGGCGTAGAGGCTGCAGTCGTGGATTGAGATGCCCGT
GTTCTGATTAGGGTCTTTCCTGTTCTGCGCCGTGATGGTGTTCTTCTGCA
TGGCCATCGGCTTGCGAGCGTAGATGGCGCACTTCTGTAAGACCACGGCG
GCGTTCCCGAAGATGAAGTCCACGGTGCCGTAGATGTCGCACTCGCGGTA
GAACTGCCGGTTTGAGTGCACGTAGAGGGTGTCTTGGTAACCGATTACGT
TGCAGCGGTACACCACCGCGTGGTCGGCGCCGACCCGGAGGGCCACCGCT
TGGTGCT
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