CX671623

Overview
NameCX671623
Unique NameCX671623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5076 contig Csv1_Contig5076:863..1643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP52L_DEBHA (Cytochrome P450 52A12 OS=Debaryomyces hansenii GN=CYP52A12 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23
Identity = 75/227 (33.04%), Postives = 114/227 (50.22%), Query Frame = -3
Query:  138 QRADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGK-----WWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSG---HRAVP-----RTKILFSLYAMGRMKSIWGEDCLEFRPERWIS-ESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 776
            Q  D + LRD +LN ++AGRDTT+  L++ F+ +++NP+  +K++EE+      EK GK       D   + L +  YL   L E LRLYP VP   +V     +LP G   +R  P        + +++YAM R +  +G+D   FRPERW   E+  + W     F  FN GPR CLG++ A T+   V A +   +           P  +  L M H  +V++
Sbjct:  299 QTRDPHVLRDQLLNILLAGRDTTAGLLSFTFYELARNPQVWSKLKEEI-----YEKFGKGDDARLEDITFESLKKCEYLKALLNEVLRLYPSVPQNFRVAQKDTSLPRGGGPNRDQPIFIAKGQTVTYTVYAMHRDEQFYGKDSEVFRPERWFEPETRKLGW----AFLPFNGGPRICLGQQFALTEASYVIARLAQLFPNLASHDDEYPPRKASHLTMCHQSEVKI 516          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP52D_CANMA (Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.306e-23
Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = -3
Query:  222 QRADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHR-------AVPR-TKILFSLYAMGRMKSIWGEDCLEFRPERWIS-ESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNY 776
            Q  D   LRD +LN ++AGRDTT+  L++ F+ +S+NP    K++EE+ +   A++  +  +   + L    YL   + EALR+YP VP   +V     TLP G         A+ +   +++++ A  R  SI+GED   FRPERW   E+  + W     +  FN GPR CLG++ A T+   V   ++  +
Sbjct:  317 QTRDPKVLRDQLLNILVAGRDTTAGLLSFLFFELSRNPTVFEKLKEEIHNRFGAKEDARVEEITFESLKLCEYLKACVNEALRVYPSVPHNFRVATRNTTLPRGGGKDGMSPIAIKKGQNVMYTISATHRDPSIYGEDANVFRPERWFEPETRKLGW----AYVPFNGGPRICLGQQFALTEASYVTVRLLQEF 506          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP52K_CANMA (Cytochrome P450 52A11 OS=Candida maltosa GN=CYP52A11 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.934e-23
Identity = 68/206 (33.01%), Postives = 101/206 (49.03%), Query Frame = -3
Query:  186 QRADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKIL--------FSLYAMGRMKSIWGEDCLEFRPERWIS-ESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGP 776
            Q  D   LRD  LN ++AGRDTT+  L++  + + +NP+  +K+REE+      +   +  D   + L    YL   + E LRLYP VP   +      TLP G      + IL        +S+YA+ R +  +G+D  EFRPERW   E   + W     F  FN GPR CLG++ A T+   V   +I +++   +    P P
Sbjct:  298 QTRDPIVLRDQSLNILLAGRDTTAGLLSFAVFELGRNPEVWSKLREEIGDKFGLDPDSRIEDISFELLKLCEYLKAVINETLRLYPSVPRNGRFAAANTTLPHGGGPDGMSPILVRKGQTVMYSVYALQRDEKYYGKDANEFRPERWFEPEVRKLGW----AFLPFNGGPRICLGQQFALTEASYVLVRLIQSFETLELSPDAPYP 499          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP52J_CANMA (Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A10 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.934e-23
Identity = 67/195 (34.36%), Postives = 99/195 (50.77%), Query Frame = -3
Query:  219 QRADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKIL--------FSLYAMGRMKSIWGEDCLEFRPERWIS-ESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYD 776
            Q  D   LRD  LN ++AGRDTT+  L++  + + +NP+  +K+R+E+      +   +  D   + L    YL   L E LRLYP VP   +      TLP G      + IL        +S+YA+ R +  +G+D  EFRPERW   E   + W     F  FN GPR CLG++ A T+   V A +I +++
Sbjct:  298 QTRDPIVLRDQSLNILLAGRDTTAGLLSFAVFELGRNPEVWSKLRQEIGHKFGLDSYSRVEDISFELLKLCEYLKAVLNETLRLYPSVPRNARFAAKNTTLPHGGGPDGMSPILVRKGQTVMYSVYALQRDEKYYGKDANEFRPERWFEPEVRKLGW----AFLPFNGGPRICLGQQFALTEASYVLARLIQSFE 488          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.350e-22
Identity = 56/184 (30.43%), Postives = 96/184 (52.17%), Query Frame = -3
Query:  216 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWE-PSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDI 764
            D  ++ T L  ++ G DTT+  LTW   L+ K+P    K++EEL++ +  E+       +   +N+LVYLH  + E LRLYPP PF        D    G+     T+++ +L+ + R  S+W  D LEF+PER++S    +     +++   F +G R C G  +    +  + A  +H+++I
Sbjct:  327 DTIIKATTLELILGGSDTTAGTLTWAMCLLLKHPHVLEKLKEELNTYIGKERC-----VNESDINKLVYLHAIIKETLRLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVW-PDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEI 504          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.419e-22
Identity = 71/211 (33.65%), Postives = 113/211 (53.55%), Query Frame = -3
Query:  129 LRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVV--EGQRPGPNVSIILYMKHGLKVRVHDR 755
            +R+ V  FM  G DTTSSAL +FF+ I+ +P+A+ K  EE+ S+V  +K         + LNQL Y+   + E LR+YP VP   +  ++ D   +G      T I  S   +GR + ++ E    F+PER+   +   K  P Y +  F+AGPR C+G++ A  ++KA+ A V+ +Y++  V    + P     +IL  K  L  +V +R
Sbjct:  306 IREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKS---TPVSYELLNQLHYVDLCVKETLRMYPSVPLLGR-KVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEP-NSFKPERFDVVTTAEKLNP-YAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLMFKVRER 510          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4D1_DROSI (Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4d1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.690e-22
Identity = 71/211 (33.65%), Postives = 113/211 (53.55%), Query Frame = -3
Query:  129 LRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVV--EGQRPGPNVSIILYMKHGLKVRVHDR 755
            +R+ V  FM  G DTTSSAL +FF+ I+ +P+A+ K  EE+ S+V  +K         + LNQL Y+   + E LR+YP VP   +  ++ D   +G      T I  S   +GR + ++ E    F+PER+   +   K  P Y +  F+AGPR C+G++ A  ++KA+ A V+ +Y++  V    + P     +IL  K  L  +V +R
Sbjct:  306 IREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKS---TPVSYELLNQLHYVDLCVKETLRMYPSVPLLGR-KVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEP-NSFKPERFDVVTTAEKLNP-YAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKDPLMFKVRER 510          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP46A_MOUSE (Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp46a1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.159e-21
Identity = 64/193 (33.16%), Postives = 107/193 (55.44%), Query Frame = -3
Query:  189 DDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPG 767
            DD  L D  + F IAG +T+++ L +    +S+ P+   +++ E+  +V +++       D + L +L YL   L E+LRLYPP     ++ L  +TL  G R    T +LFS Y MGRM + + ED L F P+R+    G    +P + +F F+ G R+C+G++ A  ++K V A ++   + ++V GQR G
Sbjct:  288 DDEVLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKR-----HLDYEDLGRLQYLSQVLKESLRLYPPAWGTFRL-LEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRF----GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIEFRLVPGQRFG 469          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP46A_HUMAN (Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP46A1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.809e-21
Identity = 63/193 (32.64%), Postives = 107/193 (55.44%), Query Frame = -3
Query:  189 DDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPG 767
            DD  L D  + F IAG +T+++ L +    +S+ P+   +++ E+  ++ +++       D + L +L YL   L E+LRLYPP     ++ L  +TL  G R    T +LFS Y MGRM + + ED L F P+R+    G    +P + +F F+ G R+C+G++ A  ++K V A ++   + ++V GQR G
Sbjct:  288 DDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRY-----LDFEDLGRLQYLSQVLKESLRLYPPAWGTFRL-LEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRF----GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFG 469          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP52F_CANTR (Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP52A6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.203e-21
Identity = 60/199 (30.15%), Postives = 102/199 (51.26%), Query Frame = -3
Query:  219 QRADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRA-------VPR-TKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYK-----FFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYD 776
            Q  D   L+D +LN M+AGRDTT+  L++  + ++++P+  +K+REE+       +  +  +   + L +  YL   L E LR+YP VP   +      TLP G          +P+ + + + +Y   R++  +G+D  +FRPERW        +EPS K     +  FN GPR CLG++ A T+   V   ++  ++
Sbjct:  304 QTRDPKVLQDQLLNIMVAGRDTTAGLLSFAMFELARHPEIWSKLREEIEVNFGVGEESRVEEITFESLKRCEYLKAILNETLRMYPSVPVNSRTATRDTTLPRGGGPNGTDPIFIPKGSTVAYIVYKTHRLEEYYGKDADDFRPERW--------FEPSTKKLGWAYVPFNGGPRICLGQQFALTEASYVITRLVQMFE 494          
The following BLAST results are available for this feature:
BLAST of CX671623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
CP52L_DEBHA1.766e-2333.04Cytochrome P450 52A12 OS=Debaryomyces hansenii GN=... [more]
CP52D_CANMA2.306e-2333.51Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4... [more]
CP52K_CANMA3.934e-2333.01Cytochrome P450 52A11 OS=Candida maltosa GN=CYP52A... [more]
CP52J_CANMA3.934e-2334.36Cytochrome P450 52A10 OS=Candida maltosa GN=CYP52A... [more]
C82A1_PEA4.350e-2230.43Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
CP4D1_DROME7.419e-2233.65Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP4D1_DROSI9.690e-2233.65Cytochrome P450 4d1 OS=Drosophila simulans GN=Cyp4... [more]
CP46A_MOUSE2.159e-2133.16Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp4... [more]
CP46A_HUMAN4.809e-2132.64Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP4... [more]
CP52F_CANTR8.203e-2130.15Cytochrome P450 52A6 OS=Candida tropicalis GN=CYP5... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B11-D22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671623 ID=CX671623; Name=CX671623; organism=Citrus sinensis; type=EST; length=781bp
TTTTTATTAATGATATTCATACTTACATAAACTATAGTTATTCAAATGAT
ACACGCCAACTCGCTCAATTATTCATATTAAACAAGAGGATTAAGACATT
TCCCAAACCTGTTCAATTATTTAGCCCATCTATCATGAACCCTAACCTTT
AATCCATGCTTCATATAGAGAATAATAGACACATTGGGGCCAGGACGCTG
TCCTTCCACAACTTGAATATCATAGTTATGAATTACGCCGGCAGCCACAG
CTTTCATTTGAGTGAAAGCGACCTCTTTGCCTAAACAAGTCCTTGGTCCT
GCATTAAATGAGAAGAACTTGTACGACGGCTCCCATTTGATCCCTCCACT
TTCAGAAATCCATCTTTCAGGCCTAAATTCCAAGCAATCTTCTCCCCATA
TTGACTTCATTCTCCCCATTGCATACAGAGAAAACAAGATCTTTGTTCTC
GGAACGGCGCGGTGTCCGCTTGGAAGAGTGTCTGGCACTAAAGGAACTTT
ATGCTGAAAAGGAACTGGTGGGTAAAGCCTTAATGCTTCGCACAAAGCGC
CATGTAAATAAACCAATTGATTTAGCTTTTGCGTGTCAAAATCCCACCAT
TTTCCGAGTTTCTCAGCTGGTACTATCGAACTAAGCTCTTCTCTAATCTT
GGTTTCTGCTTTTGGGTTCTTTGAAATAAGCCAAAAGAACCAAGTGAGAG
CTGAACTAGTTGTGTCTCTCCCCGCAATCATGAAATTCAAGACTGTATCT
CTCAAGAAATTGTCGTCAGCACGTTGCAATT
back to top