CX671623

Overview
NameCX671623
Unique NameCX671623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP27A_HUMAN (Sterol 26-hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27A1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.785e-15
Identity = 54/174 (31.03%), Postives = 87/174 (50.00%), Query Frame = -3
Query:  216 MIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFS--FNAGPRTCLGKEVAFTQMKAVAAGVIHNYDI 731
            ++AG DTTS+ LTW  + +SK+P+ +  + EE+  +VPA ++ +  DF    L     L   L E LRLYP VP   ++ +  +    G      T+ +F  Y + R  + + E    F+P RW+  S        + F S  F  G R CLG+ +A  +M+ + A +I  Y +
Sbjct:  333 LMAGVDTTSNTLTWALYHLSKDPEIQEALHEEVVGVVPAGQVPQHKDFAHMPL-----LKAVLKETLRLYPVVPTNSRI-IEKEIEVDGFLFPKNTQFVFCHYVVSRDPTAFSEP-ESFQPHRWLRNSQPATPRIQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQKYKV 499          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.785e-15
Identity = 48/192 (25.00%), Postives = 90/192 (46.88%), Query Frame = -3
Query:  201 DDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWE---PSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEG 767
            D + L+  +    +    TTS+ + W    + +NP+   K+++E+ S+    K+  +     +++  + YL   + E LRL+PP+P      L  D    G+     T+++ + +A+ R  + WG D  EFRPER    +    W+    ++K+  F AG R C G  +         A ++  +D +V +G
Sbjct:  285 DKSDLKVIIFEMFLGSTTTTSAVIEWAMTRLMRNPECLKKLQDEIRSV---SKMNSY--VSGKEVENMNYLKAVIKEVLRLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDST----WDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDG 467          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14
Identity = 63/211 (29.86%), Postives = 106/211 (50.24%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIV-PAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKI-LFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  +R     FM  G DTT+SAL+W  + ++++P+ + + R+E+  ++   E     WD     L QL +L   + E+LRL+PP     +       LP G R +P+  I + S++ +    S+W  D   F P R+ SE+   +      F  F+AGPR C+G+  A  +MK V A  +  + + + + + P     IIL  + GL +R+
Sbjct:  317 DEDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVWELLRDREPEEIEWD----DLAQLPFLTMCIKESLRLHPPAIDLLRRCTQDIVLPDG-RVIPKGNICVISIFGIHHNPSVW-PDPEVFDPFRFDSENR--QKRSPLSFIPFSAGPRNCIGQTFAMNEMKVVVALTLLRFRV-LPDDKEPRRKPEIILRAEGGLWLRM 518          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP17A_PAPCY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio cynocephalus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14
Identity = 59/220 (26.82%), Postives = 107/220 (48.64%), Query Frame = -3
Query:  126 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPF--QHKVPLVPDTLPSGHRAVPR-TKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVV-EGQRP---GPNVSIILYMKHGLKVRVHDRW 764
            DN +  T+ +   AG +TT+S + W    +  NP+ + K+ EE+   V   +     D      N+L+ L   + E LR+ P  P    HK  +       G  AV + T ++ +L+A+   +  W +   +F PER+++ +G     PS  +  F AGPR+C+G+ +A  ++  + A ++  +D++V  +GQ P   G    + L     +K++V   W
Sbjct:  289 DNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISD-----RNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSI---GEFAVDKGTHVIINLWALHHNEKEWHQPD-QFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVFLIDSFKVKIKVRQAW 499          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP17A_MACMU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca mulatta GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14
Identity = 59/220 (26.82%), Postives = 107/220 (48.64%), Query Frame = -3
Query:  126 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPF--QHKVPLVPDTLPSGHRAVPR-TKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVV-EGQRP---GPNVSIILYMKHGLKVRVHDRW 764
            DN +  T+ +   AG +TT+S + W    +  NP+ + K+ EE+   V   +     D      N+L+ L   + E LR+ P  P    HK  +       G  AV + T ++ +L+A+   +  W +   +F PER+++ +G     PS  +  F AGPR+C+G+ +A  ++  + A ++  +D++V  +GQ P   G    + L     +K++V   W
Sbjct:  289 DNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISD-----RNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSI---GEFAVDKGTHVIINLWALHHNEKEWHQPD-QFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVFLIDSFKVKIKVRQAW 499          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP17A_MACFA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca fascicularis GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14
Identity = 59/220 (26.82%), Postives = 107/220 (48.64%), Query Frame = -3
Query:  126 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPF--QHKVPLVPDTLPSGHRAVPR-TKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVV-EGQRP---GPNVSIILYMKHGLKVRVHDRW 764
            DN +  T+ +   AG +TT+S + W    +  NP+ + K+ EE+   V   +     D      N+L+ L   + E LR+ P  P    HK  +       G  AV + T ++ +L+A+   +  W +   +F PER+++ +G     PS  +  F AGPR+C+G+ +A  ++  + A ++  +D++V  +GQ P   G    + L     +K++V   W
Sbjct:  289 DNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEEIDQNVGFSRTPTISD-----RNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSI---GEFAVDKGTHVIINLWALHHNEKEWHQPD-QFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVFLIDSFKVKIKVRQAW 499          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 63/221 (28.51%), Postives = 109/221 (49.32%), Query Frame = -3
Query:  147 QRADDNFLRDTVLNFMI----AGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLP-SGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISES----GGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPG--PNVSIILYMKHGLK 776
            + A+    RD + +  +    AG + +++ + W    I KNPK   ++REE+ S+V   +L +  D     L  L YL   + E LRL+PP P    V    +T    G     +T++  ++YA+ R    W ED  EF+PER+++ S       K E   K+  F +G R C G  +A+T + +V   ++ ++D  +++G++       ++ L M H LK
Sbjct:  291 ENAEYKITRDQIKSLFVDLFSAGTEASANTIQWTMAEIIKNPKICERLREEIDSVVGKTRLVQETD-----LPNLPYLQAIVKEGLRLHPPGPV---VRTFKETCEIKGFYIPEKTRLFVNVYAIMRDPDFW-EDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFD-WIIKGEKINMKEGGTMTLTMAHPLK 501          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4F3_RAT (Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus norvegicus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 60/211 (28.44%), Postives = 104/211 (49.29%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIV-PAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKIL-FSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  +R     FM  G DTT+S L+W  + ++K+P+ + + R+E+  ++   E     WD     L QL +L   + E+LRL+PP     +       LP G R +P+  I   S++      ++W  D   + P R+ +++G  K      F  F+AGPR C+G+  A ++MK   A  +  + + + + + P     +IL  + GL +RV
Sbjct:  315 DEDIRAEADTFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREPEEIEWD----DLAQLPFLTMCIKESLRLHPPATAISRCCTQDIMLPDG-RVIPKGVICRISIFGTHHNPAVW-PDPEVYNPFRFDADNG--KGRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRV-LPDDKEPRRKPELILRAEGGLWLRV 516          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 54/188 (28.72%), Postives = 91/188 (48.40%), Query Frame = -3
Query:  195 LRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQV-VEGQR 755
            L+  + +  +AG  TT S L W    + +NPK   K++EE+ S  P +      + + +K+N   YL   + EALRL PP P      L  D    G+     T+++ + +A+ R  + WG D  EF+PER +  +   + +  +KF  F +G R C G       +    A ++  ++ ++ VE QR
Sbjct:  290 LKLIIWDMFLAGTATTLSFLEWAMTELMRNPKVMKKLQEEIRSSSPQDLFVT--EKEAEKMN---YLQAVIKEALRLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQ-DFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQR 471          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.957e-14
Identity = 51/206 (24.76%), Postives = 100/206 (48.54%), Query Frame = -3
Query:  159 DTVLNFM----IAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRP-----GPNVSIILYMK 749
            DT++  +     AG DTT+    W    + KNP+ + K++EE   +V  +++    DF     ++L YL   + E+ RL+PP P         D    G+     + +  +++A+ R  ++W ++  EFRPER++ E   +K    ++   F AG R C G ++    + ++ + ++H++     +G +P       N  ++ YM+
Sbjct:  287 DTIIGLLWDMITAGMDTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVGLDRILTEADF-----SRLPYLQCVVKESFRLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVW-KNPFEFRPERFLEEDVDMKGH-DFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMR 485          
The following BLAST results are available for this feature:
BLAST of CX671623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
CP27A_HUMAN8.785e-1531.03Sterol 26-hydroxylase, mitochondrial OS=Homo sapie... [more]
C71AG_ARATH8.785e-1525.00Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
CP4F5_RAT1.147e-1429.86Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CP17A_PAPCY1.147e-1426.82Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP17A_MACMU1.147e-1426.82Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_MACFA1.147e-1426.82Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
THAD_ARATH1.498e-1428.51Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
CP4F3_RAT1.498e-1428.44Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus nor... [more]
C71AK_ARATH1.498e-1428.72Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C98A3_ARATH1.957e-1424.76Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B11-D22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671623 ID=CX671623; Name=CX671623; organism=Citrus sinensis; type=EST; length=781bp
TTTTTATTAATGATATTCATACTTACATAAACTATAGTTATTCAAATGAT
ACACGCCAACTCGCTCAATTATTCATATTAAACAAGAGGATTAAGACATT
TCCCAAACCTGTTCAATTATTTAGCCCATCTATCATGAACCCTAACCTTT
AATCCATGCTTCATATAGAGAATAATAGACACATTGGGGCCAGGACGCTG
TCCTTCCACAACTTGAATATCATAGTTATGAATTACGCCGGCAGCCACAG
CTTTCATTTGAGTGAAAGCGACCTCTTTGCCTAAACAAGTCCTTGGTCCT
GCATTAAATGAGAAGAACTTGTACGACGGCTCCCATTTGATCCCTCCACT
TTCAGAAATCCATCTTTCAGGCCTAAATTCCAAGCAATCTTCTCCCCATA
TTGACTTCATTCTCCCCATTGCATACAGAGAAAACAAGATCTTTGTTCTC
GGAACGGCGCGGTGTCCGCTTGGAAGAGTGTCTGGCACTAAAGGAACTTT
ATGCTGAAAAGGAACTGGTGGGTAAAGCCTTAATGCTTCGCACAAAGCGC
CATGTAAATAAACCAATTGATTTAGCTTTTGCGTGTCAAAATCCCACCAT
TTTCCGAGTTTCTCAGCTGGTACTATCGAACTAAGCTCTTCTCTAATCTT
GGTTTCTGCTTTTGGGTTCTTTGAAATAAGCCAAAAGAACCAAGTGAGAG
CTGAACTAGTTGTGTCTCTCCCCGCAATCATGAAATTCAAGACTGTATCT
CTCAAGAAATTGTCGTCAGCACGTTGCAATT
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