CX671623

Overview
NameCX671623
Unique NameCX671623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4AL_PIG (Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus scrofa GN=CYP4A21 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.203e-21
Identity = 66/210 (31.43%), Postives = 104/210 (49.52%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKIL-FSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  +R  V  FM AG D+T+S ++W  + ++ NP+ + + REE+  +     LG         L+Q+ Y    + EALRLYPPVP   +    P T P G R++P   IL  S+Y +     +W     EF P R+   S       S+ F  F+ G R C+GK+ A  +MK V A  +  +++     + P P   I+L  K+G+ + +
Sbjct:  302 DTDVRAEVDTFMAAGHDSTASGISWVLYALASNPEHQQRCREEIQGL-----LGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPSVGRELSKPITFPDG-RSLPAGIILSLSIYGLHHNPQVWPNP-EEFDPSRFAPGSA----RHSHAFMPFSGGSRNCIGKQFAMNEMKVVVALTLLRFELAPDPSRIPVPIQGIVLKSKNGIHLNL 500          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4AM_HUMAN (Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20
Identity = 62/209 (29.67%), Postives = 100/209 (47.85%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  LR  V  FM  G DTT+S ++W  + ++ +PK + + REE+  +     LG         L+Q+ Y    + EALRLYPPVP   +    P T P G        +L S+Y +     +W  +   F P R+   S     + S+ F  F+ G R C+GK+ A  Q+K   A  +  +++     + P P   ++L  K+G+ +R+
Sbjct:  308 DKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHGL-----LGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVW-PNLEVFDPSRFAPGSA----QHSHAFLPFSGGSRNCIGKQFAMNQLKVARALTLLRFELLPDPTRIPIPMARLVLKSKNGIHLRL 506          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.071e-20
Identity = 65/210 (30.95%), Postives = 109/210 (51.90%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILF-SLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  LR  V  FM  G DTT+S ++W F+ ++ +P+ + + REE+  +     LG       + L+Q+ Y    + EALRLYPPVP   +    P T P G R++P+  ILF S+Y +     +W ++   F P R+  +S       S+ F  F+ G R C+GK+ A  ++K   A  +  +++     + P P   ++L  K+G+ +R+
Sbjct:  308 DQDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQHRCREEIQGL-----LGDGASITWEHLDQMPYTTMCIKEALRLYPPVPSVTRQLSKPVTFPDG-RSLPKGVILFLSIYGLHYNPKVW-QNPEVFDPFRFAPDSA----YHSHAFLPFSGGARNCIGKQFAMRELKVAVALTLVRFELLPDPTRIPIPIARVVLKSKNGIHLRL 506          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4AP_PIG (Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.827e-20
Identity = 63/210 (30.00%), Postives = 105/210 (50.00%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKIL-FSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  LR  V  FM  G DTT+S ++W  + ++ +P+ + + REE+  +     LG         L+Q+ Y    + EALRLYPPVP   +    P T P G R++P   IL  S+Y++     +W     EF P R+   S       S+ F  F+ G R C+GK+ A  +MK   A  +  +++     ++P     ++L+ K+G+ +++
Sbjct:  302 DTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGL-----LGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDG-RSLPAGIILSLSVYSLHHNPQVWPNP-EEFDPSRFAPGSA----RHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFELAPDPSRKPTVIPEVVLHSKNGIHLKL 500          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.827e-20
Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  LR  V  FM  G DTT+S ++W  + ++ +PK + + REE+ S+     LG         L+Q+ Y    + EALRLYPPVP   +    P T P G        +L S+Y +     +W    + F P R+   S     + S+ F  F+ G R C+GK+ A  ++K   A  +  +++     + P P   ++L  K+G+ +R+
Sbjct:  308 DKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSL-----LGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEV-FDPFRFAPGSA----QHSHAFLPFSGGSRNCIGKQFAMNELKVATALTLLRFELLPDPTRIPIPIARLVLKSKNGIHLRL 506          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4B1_RABIT (Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CYP4B1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20
Identity = 65/209 (31.10%), Postives = 101/209 (48.33%), Query Frame = -3
Query:  150 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGE----DCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGL 764
            D  LR  V  FM  G DTT+S ++WF + ++  P+ + + REE+  I     LG    F  + L ++ YL   + E  RLYPPVP  ++    P +   G      + I   +YA+ R   +W +    D L F PE   + SG       Y F  F+AGPR C+G++ A  +MK V A  +  ++  V   + P     ++L  K+G+
Sbjct:  297 DTDLRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQRCREEVREI-----LGDQDSFQWEDLAKMTYLTMCMKECFRLYPPVPQVYRQLSKPVSFVDGRSLPAGSLISLHIYALHRNSDVWPDPEVFDPLRFSPE---NSSG----RHPYAFIPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSVDPLRLPIKLPQLVLRSKNGI 493          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20
Identity = 59/209 (28.23%), Postives = 99/209 (47.37%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  LR  V  FM  G DTT+S ++W  + ++ +P+ + + REE+  +     LG         L+Q+ Y    + EALRLYPPVP   +    P T P G        +  S+Y +     +W  +  EF P R+   S       S+ F  F+ G R C+GK+ A  +MK   A  +  +++     ++P     ++L  K+G+ +++
Sbjct:  302 DTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGL-----LGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVW-PNPEEFDPSRFAPGSA----RHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFELAPDPSRKPIATPEVVLNSKNGIHLKL 500          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4B1_HUMAN (Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.317e-20
Identity = 62/216 (28.70%), Postives = 105/216 (48.61%), Query Frame = -3
Query:  138 RADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGE----DCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 773
            +  D  LR  V  FM  G DTT+S ++WF + ++  P+ + + REE+  I+  +   +W D     L ++ YL   + E+ RLYPPVP  ++    P T   G      + I   +YA+ R  ++W +    D L F      S     K  P + F  F+AGPR C+G++ A ++MK V A  +  ++  +   + P     ++L  K+G  + +
Sbjct:  299 KLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQHRCREEVREILGDQDFFQWDD-----LGKMTYLTMCIKESFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISMHIYALHRNSAVWPDPEVFDSLRF------STENASKRHP-FAFMPFSAGPRNCIGQQFAMSEMKVVTAMCLLRFEFSLDPSRLPIKMPQLVLRSKNGFHLHL 502          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.317e-20
Identity = 66/212 (31.13%), Postives = 109/212 (51.42%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPR---TKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  LR  V  FM  G DTT+S ++W F+ ++ +P+ + + REE+ SI+  +     WD     L+Q+ Y    + EALRLYPPVP   +    P T P G R++P+   T IL  +Y +    S W    + F P R+  +S       S+ +  F+ G R C+GK+ A  ++K   A  +  +++     + P P   ++L  K+G+ +R+
Sbjct:  305 DEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSIL-GDGTSVTWD----HLDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDG-RSIPKGITTTIL--IYGLHHNPSYWPNPKV-FDPSRFSPDSP----RHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRIPVPMARLVLKSKNGIHLRL 503          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4CA_MOUSE (Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.070e-20
Identity = 59/209 (28.23%), Postives = 100/209 (47.85%), Query Frame = -3
Query:  138 DNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPNVSIILYMKHGLKVRV 764
            D  LR  V  FM  G DTT+S ++W F+ ++ NP+ + + R+E+ S+     LG         L+++ Y    + EALR+YPPVP   +    P T P G        ++ S Y +    ++W    + F P R+   S       S+ F  F+ G R C+GK+ A  ++K   A  +  +++     + P P   I+L  K+G+ + +
Sbjct:  306 DKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSL-----LGDGTSITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEV-FDPSRFAPGSS----RHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRVPIPIPRIVLKSKNGIHLHL 504          
The following BLAST results are available for this feature:
BLAST of CX671623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
CP4AL_PIG8.203e-2131.43Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus s... [more]
CP4AM_HUMAN1.071e-2029.67Cytochrome P450 4A22 OS=Homo sapiens GN=CYP4A22 PE... [more]
CP4A4_RABIT1.071e-2030.95Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CY... [more]
CP4AP_PIG1.827e-2030.00Cytochrome P450 4A25 OS=Sus scrofa GN=CYP4A25 PE=2... [more]
CP4AB_HUMAN1.827e-2029.67Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP4B1_RABIT4.071e-2031.10Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CY... [more]
CP4AO_PIG4.071e-2028.23Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP4B1_HUMAN5.317e-2028.70Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1... [more]
CP4AE_RAT5.317e-2031.13Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4CA_MOUSE9.070e-2028.23Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B11-D22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671623 ID=CX671623; Name=CX671623; organism=Citrus sinensis; type=EST; length=781bp
TTTTTATTAATGATATTCATACTTACATAAACTATAGTTATTCAAATGAT
ACACGCCAACTCGCTCAATTATTCATATTAAACAAGAGGATTAAGACATT
TCCCAAACCTGTTCAATTATTTAGCCCATCTATCATGAACCCTAACCTTT
AATCCATGCTTCATATAGAGAATAATAGACACATTGGGGCCAGGACGCTG
TCCTTCCACAACTTGAATATCATAGTTATGAATTACGCCGGCAGCCACAG
CTTTCATTTGAGTGAAAGCGACCTCTTTGCCTAAACAAGTCCTTGGTCCT
GCATTAAATGAGAAGAACTTGTACGACGGCTCCCATTTGATCCCTCCACT
TTCAGAAATCCATCTTTCAGGCCTAAATTCCAAGCAATCTTCTCCCCATA
TTGACTTCATTCTCCCCATTGCATACAGAGAAAACAAGATCTTTGTTCTC
GGAACGGCGCGGTGTCCGCTTGGAAGAGTGTCTGGCACTAAAGGAACTTT
ATGCTGAAAAGGAACTGGTGGGTAAAGCCTTAATGCTTCGCACAAAGCGC
CATGTAAATAAACCAATTGATTTAGCTTTTGCGTGTCAAAATCCCACCAT
TTTCCGAGTTTCTCAGCTGGTACTATCGAACTAAGCTCTTCTCTAATCTT
GGTTTCTGCTTTTGGGTTCTTTGAAATAAGCCAAAAGAACCAAGTGAGAG
CTGAACTAGTTGTGTCTCTCCCCGCAATCATGAAATTCAAGACTGTATCT
CTCAAGAAATTGTCGTCAGCACGTTGCAATT
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