CX671623

Overview
NameCX671623
Unique NameCX671623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 44/189 (23.28%), Postives = 95/189 (50.26%), Query Frame = -3 
Query:  195 NFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQR 761
            N ++  +++ ++AG DT++  +TW    ++KNP+   K++ E+ S +  ++   + D D     +L YL   + E  RL+P  P       + +   +G+    +T++  +++A+GR    W +D   F PER+   +   K +  ++   F  G R C    +  T ++   A +++++D ++ EG +
Sbjct:  289 NHIKAILMDVLLAGMDTSAITMTWAMAELAKNPRVMKKVQSEIRSQIKNKERISFDDTD-----KLEYLKMVIKETWRLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTW-KDPEVFLPERFTDNNIDAKGQ-HFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKLPEGMK 470
The following BLAST results are available for this feature:
BLAST of CX671623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
C71BV_ARATH7.696e-1123.28Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B11-D22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671623 ID=CX671623; Name=CX671623; organism=Citrus sinensis; type=EST; length=781bp
TTTTTATTAATGATATTCATACTTACATAAACTATAGTTATTCAAATGAT
ACACGCCAACTCGCTCAATTATTCATATTAAACAAGAGGATTAAGACATT
TCCCAAACCTGTTCAATTATTTAGCCCATCTATCATGAACCCTAACCTTT
AATCCATGCTTCATATAGAGAATAATAGACACATTGGGGCCAGGACGCTG
TCCTTCCACAACTTGAATATCATAGTTATGAATTACGCCGGCAGCCACAG
CTTTCATTTGAGTGAAAGCGACCTCTTTGCCTAAACAAGTCCTTGGTCCT
GCATTAAATGAGAAGAACTTGTACGACGGCTCCCATTTGATCCCTCCACT
TTCAGAAATCCATCTTTCAGGCCTAAATTCCAAGCAATCTTCTCCCCATA
TTGACTTCATTCTCCCCATTGCATACAGAGAAAACAAGATCTTTGTTCTC
GGAACGGCGCGGTGTCCGCTTGGAAGAGTGTCTGGCACTAAAGGAACTTT
ATGCTGAAAAGGAACTGGTGGGTAAAGCCTTAATGCTTCGCACAAAGCGC
CATGTAAATAAACCAATTGATTTAGCTTTTGCGTGTCAAAATCCCACCAT
TTTCCGAGTTTCTCAGCTGGTACTATCGAACTAAGCTCTTCTCTAATCTT
GGTTTCTGCTTTTGGGTTCTTTGAAATAAGCCAAAAGAACCAAGTGAGAG
CTGAACTAGTTGTGTCTCTCCCCGCAATCATGAAATTCAAGACTGTATCT
CTCAAGAAATTGTCGTCAGCACGTTGCAATT
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