CX671623

Overview
NameCX671623
Unique NameCX671623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.186e-17
Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = -3
Query:  198 LRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQ 755
            ++  VL+  + G DT+S+ + W    + ++P    K++EE+ +I   +            +  + YL   + EALRL+PPVP         D     +     T+++ +L+A+GR  + WG D  EFRPER +      + +  ++   F AG R C G   A    + V A ++H +D Q ++ +
Sbjct:  279 IKAIVLDAFVGGTDTSSTLVEWEMTELLRHPTCLKKLQEEVRTICKGKS-----SVSEDDIQGMEYLKAVVKEALRLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDFRGQ-DFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDE 458          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.385e-17
Identity = 52/190 (27.37%), Postives = 95/190 (50.00%), Query Frame = -3
Query:  192 DTVLNFM----IAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRP 749
            DTV+  +     AG DTT  ++ W    + +NP+ + K++EEL  +V  +++    DF       L YL   + E+LRL+PP P         +    G+       ++ +++A+ R   +W    LE+RPER++ E+  IK    ++   F AG R C G ++    + ++   ++H+++  + EG RP
Sbjct:  290 DTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDF-----QNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNP-LEYRPERFLEENIDIKGS-DFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRP 472          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C4AD1_DROME (Probable cytochrome P450 4ad1 OS=Drosophila melanogaster GN=Cyp4ad1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.226e-16
Identity = 57/190 (30.00%), Postives = 101/190 (53.16%), Query Frame = -3
Query:  183 DTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDI-QVVEGQRPGPN 749
            + V  F+  G D  ++A+++  + +S++ + + K  EE   I      G   + D  +L+Q+ YL   + E LRLYP VP   +    P  + +G +    T ++  L AMG  +  + + C  FRPER+ + +G +  E ++K   F+AGPR C+ ++ A  QMKA+ + ++  ++I   V+G  PG N
Sbjct:  297 EEVSTFIFTGHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGENFAG---EADLARLDQMHYLELIIRETLRLYPSVPLIARTNRNPIDI-NGTKVAKCTTVIMCLIAMGYNEKYFDDPCT-FRPERFENPTGNVGIE-AFKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILPAVDGLPPGIN 480          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.226e-16
Identity = 53/175 (30.29%), Postives = 88/175 (50.29%), Query Frame = -3
Query:  216 FMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESG--GIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDI 734
            F++AG DTT+++L +  +L++K+P+     +EE+ ++V +E +          + +L YL   + E+LRLYP   F      V  T           KI   + ++ R K IWGE+  +F PERW+  S    + W P      F AGPR C+G  +  ++ K   A ++  YD+
Sbjct:  317 FLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENV------SYDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLEPSSRHTMSWIP------FGAGPRQCVGMRLGLSEAKTALAHLLRRYDL 479          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C13A2_CAEEL (Putative cytochrome P450 CYP13A2 OS=Caenorhabditis elegans GN=cyp-13A2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.226e-16
Identity = 50/174 (28.74%), Postives = 88/174 (50.57%), Query Frame = -3
Query:  213 FMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQ 734
            F+I G DTT+ +L++  +L++ NPK + K+ EE+     A + G   + + +KL +L Y+   + EALRLYP     +    +  T  +G +      +    +++     +WGED  EF+PERW ++      E    +  F  GPR C+G  +A  + K +   ++ NY  +
Sbjct:  320 FLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEI-----AREFGTS-EVEFEKLGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNGVKIEAGVYVQMDTWSLHYDPELWGEDVKEFKPERWSTDE---PLEHKGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTFE 484          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CPXN_ANASP (Probable cytochrome P450 110 OS=Anabaena sp. (strain PCC 7120) GN=cyp110 PE=3 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 2.091e-16
Identity = 62/221 (28.05%), Postives = 108/221 (48.87%), Query Frame = -3
Query:  147 QRADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQ-----------RPGPNVSIILYMKHGLK 776
            Q   D  L+D +L  + AG +TT++ + W F+ I KN   + K+++EL      ++LG   + +  ++ QL YL     E LR+YP +P             +G++  P T ++ S+Y +   + ++  +  +FRPER+I      ++ PS ++  F  G R CLG  +A  ++K V A V+ NY + + E +            P   V +I+  K  LK
Sbjct:  244 QAMTDEELKDELLTILFAGHETTATTIAWAFYQILKNVNVQEKLQQEL------DRLGA--NPNPMEIAQLPYLTAVSQETLRMYPVLPTLFPRITKSSINIAGYQLEPDTTLMASIYLIHYREDLY-PNPQQFRPERFIER----QYSPS-EYIPFGGGSRRCLGYALALLEIKLVIATVLSNYQLALAEDKPVNVQRRGFTLAPDGGVRVIMTGKKSLK 450          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.091e-16
Identity = 54/191 (28.27%), Postives = 94/191 (49.21%), Query Frame = -3
Query:  195 DDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQR 767
            DD  ++  +L+  +AG DTT +AL W    + KNP+A   +++E+  +      G   + +   L ++ YL   + E+LRL+ PVP         DT   G+     T++L + +A+GR  S+W E+   F PER++  S   +    ++   F +G R C G   A    +   A ++H +D ++  G R
Sbjct:  297 DDLTIKAVILDMFLAGTDTTVTALEWALSELIKNPRAMKILQKEVRGVA-----GSKGEIEESDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVW-EESETFLPERFLETSIDYR-GMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVR 480          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: PID6_FUSSO (Pisatin demethylase OS=Fusarium solani subsp. pisi GN=PDA6-1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16
Identity = 54/182 (29.67%), Postives = 91/182 (50.00%), Query Frame = -3
Query:  183 AGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPR-TKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRPGPN 725
            AG DTT++AL+   + +  NP+   ++REEL + V  + +        Q+   + YL   + EALRL+P V  Q    +    L    +  P   ++  + +A+   K+I+G D   FRPERW+   G +    S   F+F AG R+C+GK ++  +M      ++ N+DI++  G     N
Sbjct:  315 AGSDTTANALSSILYFLYTNPRTLRRLREELDTHVKEDPIR------FQQSQSMPYLQAVIKEALRLHPGVGTQLTRVVPKGGLVIEGQFFPEGAEVGVNGWALYHNKAIFGNDASVFRPERWLETKGNLNIGGS---FAFGAGSRSCIGKNISILEMSKAIPQIVRNFDIEINHGDMTWKN 487          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP52P_CANTR (Cytochrome P450 52C1 OS=Candida tropicalis GN=CYP52C1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16
Identity = 58/197 (29.44%), Postives = 101/197 (51.27%), Query Frame = -3
Query:  222 QRADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVP-AEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSG-----------HRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNY 776
            Q  + + L+D +++ ++AGRDTT+S LT+ F+ +S +P+   K++EE+    P  E +     F T  + +  YL   + E +RL+P VPF  +       +P G           H+     ++LFS Y++ R +  +G +  +F PERW SES         +F  F+AGPR CLG+++   +   V   ++  +
Sbjct:  293 QTKNRDILQDELMSILLAGRDTTASLLTFLFFELSHHPEVFNKLKEEIERHFPDVESV----TFGT--IQRCDYLQWCINETMRLHPSVPFNFRTAANDTVIPRGGGKSCTDPILVHKG---EQVLFSFYSVNREEKYFGTNTDKFAPERW-SES-----LRRTEFIPFSAGPRACLGQQLPRVEASYVTIRLLQTF 474          
BLAST of CX671623 vs. ExPASy Swiss-Prot
Match: CP4V3_MOUSE (Cytochrome P450 4V3 OS=Mus musculus GN=Cyp4v3 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16
Identity = 58/216 (26.85%), Postives = 105/216 (48.61%), Query Frame = -3
Query:  129 RADDNFLRDTVLNFMIAGRDTTSSALTWFFWLISKNPKAETKIREELSSIVPAEKLGKWWDFDTQKLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGEDCLEFRPERWISESGGIKWEPSYKFFSFNAGPRTCLGKEVAFTQMKAVAAGVIHNYDIQVVEGQRP-GPNVSIILYMKHGLKVRVHDR 773
            R     +R+ V  FM  G DTT++A+ W  +L+  NP+ + K+ +EL  +              + L +L YL   + E LR++P VP   +  L  D    G++    T+ +   YA+ R    +  D  EFRPER+  E+   +    Y +  F+AGPR C+G++ A  + K + A ++  + ++  + +   G    +IL   +G+ +++  R
Sbjct:  313 RLSQEDIREEVDTFMFEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHR----PVTLEDLKKLKYLDCVIKETLRVFPSVPLFAR-SLSEDCEVGGYKVTKGTEAIIIPYALHRDPRYF-PDPEEFRPERFFPENS--QGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQFWVESNQKREELGLAGDLILRPNNGIWIKLKRR 520          
The following BLAST results are available for this feature:
BLAST of CX671623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 301
Match NameE-valueIdentityDescription
C71AN_ARATH7.186e-1726.88Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI9.385e-1727.37Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C4AD1_DROME1.226e-1630.00Probable cytochrome P450 4ad1 OS=Drosophila melano... [more]
C13B1_CAEEL1.226e-1630.29Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
C13A2_CAEEL1.226e-1628.74Putative cytochrome P450 CYP13A2 OS=Caenorhabditis... [more]
CPXN_ANASP2.091e-1628.05Probable cytochrome P450 110 OS=Anabaena sp. (stra... [more]
C71A6_NEPRA2.091e-1628.27Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
PID6_FUSSO2.731e-1629.67Pisatin demethylase OS=Fusarium solani subsp. pisi... [more]
CP52P_CANTR2.731e-1629.44Cytochrome P450 52C1 OS=Candida tropicalis GN=CYP5... [more]
CP4V3_MOUSE2.731e-1626.85Cytochrome P450 4V3 OS=Mus musculus GN=Cyp4v3 PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12B11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B11-D22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671623 ID=CX671623; Name=CX671623; organism=Citrus sinensis; type=EST; length=781bp
TTTTTATTAATGATATTCATACTTACATAAACTATAGTTATTCAAATGAT
ACACGCCAACTCGCTCAATTATTCATATTAAACAAGAGGATTAAGACATT
TCCCAAACCTGTTCAATTATTTAGCCCATCTATCATGAACCCTAACCTTT
AATCCATGCTTCATATAGAGAATAATAGACACATTGGGGCCAGGACGCTG
TCCTTCCACAACTTGAATATCATAGTTATGAATTACGCCGGCAGCCACAG
CTTTCATTTGAGTGAAAGCGACCTCTTTGCCTAAACAAGTCCTTGGTCCT
GCATTAAATGAGAAGAACTTGTACGACGGCTCCCATTTGATCCCTCCACT
TTCAGAAATCCATCTTTCAGGCCTAAATTCCAAGCAATCTTCTCCCCATA
TTGACTTCATTCTCCCCATTGCATACAGAGAAAACAAGATCTTTGTTCTC
GGAACGGCGCGGTGTCCGCTTGGAAGAGTGTCTGGCACTAAAGGAACTTT
ATGCTGAAAAGGAACTGGTGGGTAAAGCCTTAATGCTTCGCACAAAGCGC
CATGTAAATAAACCAATTGATTTAGCTTTTGCGTGTCAAAATCCCACCAT
TTTCCGAGTTTCTCAGCTGGTACTATCGAACTAAGCTCTTCTCTAATCTT
GGTTTCTGCTTTTGGGTTCTTTGAAATAAGCCAAAAGAACCAAGTGAGAG
CTGAACTAGTTGTGTCTCTCCCCGCAATCATGAAATTCAAGACTGTATCT
CTCAAGAAATTGTCGTCAGCACGTTGCAATT
back to top