CX671621
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_EUGGR (Cytochrome c1, heme protein OS=Euglena gracilis PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.635e-32 Identity = 69/136 (50.74%), Postives = 87/136 (63.97%), Query Frame = -3 Query: 353 GAYPPDLSLITKARHDGQNYVFALLTGYRDP-PAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRKLVLDVVN 757 GA PPDLS+IT ARH G +Y++ALLTGY P P GV + YNPYF GG I MP L D +EYEDGTPA+ QM KDV FL W + P +ERKL+G+K I L++ + +GYY R + +SR+L N Sbjct: 105 GALPPDLSVITNARHGGVDYIYALLTGYGRPVPGGVQLSTTQWYNPYFHGGIIGMPPPLTDDMIEYEDGTPASVPQMAKDVTCFLEWCSNPWWDERKLLGYKTIATLAVIAVSSGYYNRFLSGLWRSRRLAFRPFN 240
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CYBC_BRAJA (Cytochrome b/c1 OS=Bradyrhizobium japonicum GN=fbcH PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.160e-26 Identity = 67/138 (48.55%), Postives = 82/138 (59.42%), Query Frame = -3 Query: 404 GGAYPPDLSLITKAR------------------HDGQNYVFALLTGYRDP-PAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRR 760 GGA PPDLSLITKAR G +YV A+L G+ + P GV+I EG +YN YFPG AI MPK L DG + Y+DG+PAT AQ KDV TFL W AEP ME RK +GF+ +FV + Y+ + Sbjct: 543 GGAAPPDLSLITKARSYGRGFPWFIFDFFTQYQEQGPDYVSAVLQGFEEKVPEGVTIPEGSYYNKYFPGHAIKMPKPLSDGQVTYDDGSPATVAQYSKDVTTFLMWTAEPHMEARKRLGFQ-VFVFLIIFAGLMYFTK 679
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_RHORU (Cytochrome c1 OS=Rhodospirillum rubrum GN=petC PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.022e-24 Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = -3 Query: 434 GGAYPPDLSLITKARHDGQNYVFALLTGYRDPPAG----------------VSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSL 760 GGA PPDLSL+ KAR G NY+++LL GY G V+ E ++N YFPG AI+MP L+D + YEDGT AT+ QM +DVV +L+WAAEPE++ RK +G K + L + Sbjct: 130 GGAAPPDLSLLAKARPGGPNYIYSLLEGYASDSPGEPAEWWVKQQQEKGLEVAFNEAKYFNDYFPGHAISMPPPLMDDLITYEDGTAATKDQMAQDVVAYLNWAAEPELDARKSLGLKVLLFLGV 254
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_RHOVI (Cytochrome c1 OS=Rhodopseudomonas viridis GN=petC PE=4 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.569e-21 Identity = 53/121 (43.80%), Postives = 67/121 (55.37%), Query Frame = -3 Query: 449 GAYPPDLSLITKAR------------------HDGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWI 757 GA PPDLS+I KAR +G +Y+ ALL GY DPP + +G YN YFPG I M + DG + Y DGTP T+ Q KDV FL WAAEP ++ RK +G+ W+ Sbjct: 136 GAVPPDLSVIAKARTFQRGFPWWVTDIFTQYNENGVDYIVALLNGYEDPPERFKVPDGSFYNKYFPGHIIGMTPPIADGLVTYGDGTPETQLQYSKDVAAFLMWAAEPTLDVRKRIGW-WV 255
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_PARDE (Cytochrome c1 OS=Paracoccus denitrificans GN=petC PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.415e-14 Identity = 53/130 (40.77%), Postives = 64/130 (49.23%), Query Frame = -3 Query: 425 GGAYPPDLSLITKARHD-----------------GQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGF-KWIFVLSLALL 760 G PDLSL+ KAR G Y+ A+LTGY D L++N F G I M L D + YEDGTPAT QM DV FL W AEP+M +RK +GF IF++ LA L Sbjct: 303 GEGMGPDLSLMAKARAGFHGPYGTGLSQLFNGIGGPEYIHAVLTGY-DGEEKEEAGAVLYHNAAFAGNWIQMAAPLSDDQVTYEDGTPATVDQMATDVAAFLMWTAEPKMMDRKQVGFVSVIFLIVLAAL 431
BLAST of CX671621 vs. ExPASy Swiss-Prot
Match: CY1_RHOCA (Cytochrome c1 OS=Rhodobacter capsulatus GN=petC PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.963e-11 Identity = 50/168 (29.76%), Postives = 71/168 (42.26%), Query Frame = -3 Query: 374 GGAYPPDLSLITKARHD-----------------GQNYVFALLTGYRD----PPAGVSIREGLHYNPYFPGGAIA------------------MPKMLIDGALEYEDGTPATEAQMGKDVVTFLSWAAEPEMEERKLMGFKWIFVLSLALLQAGYYRRLRWSVLKSRK 760 G PDLS++ KAR G Y++ + G+ + P G+ +G +YN F G + MP L+D + YEDGTPAT QM +DV FL WAAEP++ RK MG + +L L + + W+ K K Sbjct: 114 GDGMGPDLSVMAKARAGFSGPAGSGMNQLFKGMGGPEYIYNYVIGFEENPECAPEGI---DGYYYNKTFQIGGVPDTCKDAAGVKITHGSWARMPPPLVDDQVTYEDGTPATVDQMAQDVSAFLMWAAEPKLVARKQMGLVAMVMLGLLSVMLYLTNKRLWAPYKGHK 278 The following BLAST results are available for this feature:
BLAST of CX671621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671621 ID=CX671621; Name=CX671621; organism=Citrus sinensis; type=EST; length=762bpback to top |