CX671618

Overview
NameCX671618
Unique NameCX671618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8500 contig Csv1_Contig8500:268..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 54/167 (32.34%), Postives = 89/167 (53.29%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMV----PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R+ GA++IIG+D NP K E+ + FG TDF+NP D  +K + E++  +T+G G+D   ECTG  + +    E                   V    P+N +      +TLKGT FG  K ++DLP +++    KE +L + +TH V   EI+ A  L+ + + ++ ++
Sbjct:  215 RLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDH-SKPVHEVLIEMTNG-GLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFL----NEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVM 375          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.790e-17
Identity = 54/163 (33.13%), Postives = 85/163 (52.15%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            RM GA++IIG+D NP K E+ + FG TDF+NP D   K + E++  +T G GV+   ECTG    +  A E                    P+N +      RTL+GT FG  K ++ LP ++D    KE +L + +TH +   +I+ A  L+ + + ++ +I
Sbjct:  215 RMSGASRIIGVDLNPAKHEQAKKFGCTDFVNPKDH-TKPVQEVIVEMTDG-GVNRAVECTGNADAMISAFECVHDGWGVAHKEAVFKTH--PMNFL----NERTLRGTFFGNYKPRTGLPGVVDMYMRKELELDKFITHSLPFSQINTAFDLMLRGEGLRCVI 369          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17
Identity = 61/198 (30.81%), Postives = 92/198 (46.46%), Query Frame = -3
Query:  152 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNK-SISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 730
            AA   AKVE                     +  GA KI GID NP K E  + FG TDF+NP D  +K SI   +  +T G G DY FEC G  + +  ALE T                   +  P  ++     GR  KG+ FGG ++ SD+P L++    K+  + + +TH + L +I++A  L+ + + ++ +I
Sbjct:  185 AALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTDG-GFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVV----GRVWKGSAFGGWRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSII 377          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 54/169 (31.95%), Postives = 89/169 (52.66%), Query Frame = -3
Query:  146 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 640
            ++ GA++IIG+D N  K  + + FG T+ INP D  +K I E++  +T G GVDY FEC G   ++  ALE                        P  ++     GRT KGT FGG K+   +P L+ +  +K+ K+ + +TH++  +EI+KA +L+     ++ ++ I
Sbjct:  212 KVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPIQEVLIEMTDG-GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVT----GRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 1.440e-16
Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = -3
Query:  152 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 631
            GA++IIGID N  K  K +A G TD +NP D  +K I E++  +T G GVD+  +C G    +  AL+ T                   T+ P  +I     GRT+ GT FGG K+   +P L+   KNK+F L  L+TH +  ++I +A  L+ Q   ++ ++
Sbjct:  221 GASRIIGIDINSEKFVKAKALGATDCLNPRDL-HKPIQEVIIELTKG-GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFPEELII----GRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAFDLMNQGKSIRTIL 378          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 53/163 (32.52%), Postives = 85/163 (52.15%), Query Frame = -3
Query:  146 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMVPLNVIA-LACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 631
            GAA+II +D N  +  K +  G TD ++P D   K I E++  +  G GVD+CFE TG    +  AL +                    L++ + L   GR LKG+  GG KTK ++P L+     K+F +  L+TH + L E ++A+QL+K   C++ ++ +
Sbjct:  216 GAARIIAVDINKDRFAKAKTVGATDCVDPRDF-EKPIEEVLSDMIDG-GVDFCFEVTGNTEAVGAALGSCHKDHGVCVTVGALASFTSTLSIRSHLFFSGRILKGSILGGWKTKEEIPKLVSDYMAKKFNIDPLITHTLTLSEANEAVQLMKSGQCIRCVLLL 376          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = -3
Query:  152 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMVPLNVIA-LACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 631
            GAA+II +D N  K  K +  G T+ I+P D   K I +++  + +  G D+ FE TG P  +  AL +                + + LN+ + L   GRTLKG+  GG KTK ++P L+     K+F L  L+TH + L+++++AIQL+K   C++ ++
Sbjct:  216 GAARIIAVDTNKDKFAKAKTVGATECIDPQDF-EKPIQQVLFDMMND-GADFTFEVTGNPETVETALASCHKDHGVCVIVGSLA-SWIQLNINSHLFFSGRTLKGSVLGGWKTKEEIPKLVSDYTAKKFNLDPLITHTLTLDKVNEAIQLMKNGQCIRCVL 373          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.881e-16
Identity = 52/167 (31.14%), Postives = 87/167 (52.10%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMV----PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R+ GA++IIG+D N  + E+   FG T+F+NP D   K + +++  +T+G GVD   ECTG  + + +A E                        P+N +      RTLKGT FG  K ++DLP +++    KE ++ + +TH V   EI+ A  L+ + + ++ +I
Sbjct:  215 RIAGASRIIGVDLNAVRFEEARKFGCTEFVNPKDH-TKPVQQVLADMTNG-GVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFL----NERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINTAFDLMAKGEGIRCII 375          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.208e-16
Identity = 58/199 (29.15%), Postives = 98/199 (49.25%), Query Frame = -3
Query:  146 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 730
            AA   A VEK                    +  GAA+IIGID N  K E G+ FG+T+F+NP  +  KS+ +++  +T  +GVD+ FEC G   ++  ALE+                    +  P  ++     GR  KGT FGG K++  +P L+D   NK+  L + ++H +  ++I++A  L+ + + ++ ++ I
Sbjct:  184 AALNTAAVEKGSNCAVWGLGAVGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNPK-KFCKSVQKVLGEMTD-VGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVT----GRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVLDI 376          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.190e-16
Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = -3
Query:  146 GAAKIIGIDKNPWKKEKGEAFGMTDFINP--DDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 631
            GA +IIGID N  K   G+ FG T+FINP  D    K+I + +  IT G GVDY FEC G  +++  ALE                     +  P  ++     GR  KG+ FGG+K++S LP ++DK  +K+ K+ + +T    L EI+ A  ++ +   ++ ++ +
Sbjct:  217 GAKRIIGIDNNETKFGPGKDFGCTEFINPSKDLPEGKTIQQHLVDITDG-GVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVAPAGAEISTRPFQLVT----GRVWKGSAFGGVKSRSQLPSIIDKYMDKKLKVDEYVTFTYPLNEINTAFDVMHEGKSLRSVVNL 379          
The following BLAST results are available for this feature:
BLAST of CX671618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH2_ORYSI3.790e-1732.34Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH2_HORVU3.790e-1733.13Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADHX_DROME6.465e-1730.81Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]
ADHX_HUMAN1.103e-1631.95Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADH4_HUMAN1.440e-1634.15Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADH6_RAT1.881e-1632.52Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH6_PERMA1.881e-1633.54Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]
ADH1_HORVU1.881e-1631.14Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADHX_OCTVU3.208e-1629.15Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADHX_DICDI4.190e-1632.74Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B08-D16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671618 ID=CX671618; Name=CX671618; organism=Citrus sinensis; type=EST; length=732bp
GCAAAAACTCCGTTCTTTCTTTATTACAAATTAGAGGTTTGGTGATGAGA
TTAGGAGTGAACATAAATAGAAGGGATCTCAAGAGCAGATCTTAAGATTT
TGATCACGAATTTAACACAAGGAGAGCATAGGATAAAACCGATCAAATCG
TGATCAGGACCTTGACACAATCAGGTTGCTTCAACAGCTGAATTGCCTTG
TCGATCTCTTCCAATTTAACATGATGGGTCAAGAGTTGATGGAGTTTAAA
TTCCTTGTTCTTGCATTTGTCAAGCAGTATCGGAAGGTCGGATTTTGTTT
TGATCCCACCAAAAGTGGTCCCTTTCAAAGTCCGACCACCACATGCAAGA
GCGATTACGTTCAGTGGCACCATGGTATCAACTCCCACCCCAATTACTAT
CACTTTTCCTTTTCCCACTTTTGTGGTTTCAAGTGCTTCAGAAAGTAAAG
ATGGAACCCCAGTGCACTCGAAGCAATAATCCACACCCATTCCATGAGTT
ATCCCCTTGACCAATTCTGAAATTGACTTGTTTGGTTCATCATCAGGGTT
TATGAAATCTGTCATTCCAAAAGCTTCCCCCTTTTCTTTTTTCCATGGGT
TCTTGTCTATCCCAATTATCTTAGCTGCCCCTTGCATCCTGGCTCCATCA
ACAGCCCCTAATCCAACAGTACCAAGGCCTAAAACAGCAACACTAGATCC
TTTTTCAACTTTGGCTTCCTTCCAAGCCGCCC
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