CX671618

Overview
NameCX671618
Unique NameCX671618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.032e-14
Identity = 52/161 (32.30%), Postives = 80/161 (49.69%), Query Frame = -3
Query:  149 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 631
            GAA+IIG+D N  K  K +  G T+ +NP D   K I E++  +++G GVD+ FE  G    +  AL                 D+        L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   LL+  + ++ ++T
Sbjct:  216 GAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILT 374          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14
Identity = 49/167 (29.34%), Postives = 88/167 (52.69%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R   A +II ID NP K E  + FG TD +NP+D  +K I +++  I    G+D+ FEC G  +++ +ALE+                    +  P  ++     GR  KG+ FGG+K +S+LP +++     + +L   +TH + L++I++A +L+ +   ++ +I
Sbjct:  216 RQAKAGRIIAIDTNPAKFELAKQFGATDCLNPNDY-DKPIKDVLLDINK-WGIDHTFECIGNVNVMRQALESAHRGWGQSIIIGVAGAGQEISTRPFQLVT----GRVWKGSAFGGVKGRSELPQMVEDSMKGDIQLEPFVTHTMPLDKINEAFELMHEGKSIRTVI 376          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14
Identity = 53/161 (32.92%), Postives = 88/161 (54.66%), Query Frame = -3
Query:  152 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTXXXXXXXXXXXXXVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 631
            GA++II ID N  K  K +A G TD +NP  E NK + +++  +T+G GVD+  +C G   ++   ++  T              D  + ++ I L  G RTLKGT FGG   ++ +P L+   KN +F L  L+TH +  ++I++A+ LL Q   ++ ++
Sbjct:  221 GASRIIAIDINSDKFAKAKALGATDCLNPR-ELNKPVQDVIVEMTNG-GVDFAIDCAGGSEVMKATVDCATVGWGSCTFVGVNLADKGLTISPIELILG-RTLKGTNFGGWDAET-VPKLVSDYKNGKFDLDALVTHTLPFDKINEALNLLDQGKSIRTVL 377          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14
Identity = 49/167 (29.34%), Postives = 84/167 (50.30%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMV----PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            RM GA++IIG+D    + E  + FG+ +F+NP D  +K + +++  +T G GVD   ECTG    +  A E                        P+N +      RTLKGT +G  K ++DLP ++++    E +L + +TH +   EI+KA   + + + ++ +I
Sbjct:  216 RMSGASRIIGVDLVSSRFELAKKFGVNEFVNPKDH-DKPVQQVIAEMTDG-GVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPKKDDAFKTHPMNFL----NERTLKGTFYGNYKPRTDLPNVVEQYMKGELELEKFITHSIPFSEINKAFDYMLKGESIRCII 376          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 51/165 (30.91%), Postives = 85/165 (51.52%), Query Frame = -3
Query:  146 AAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 628
            A +I GID NP KK    +FG TDFINP+D     I +++   T G G+D+ F+CTG   ++  ALE                     +  P  ++     GR  +G  FGG+K +S LP L+ +  + + ++ + +TH   L+EI++A   +   +C+K +++I
Sbjct:  221 AGRIFGIDVNPEKKNWAMSFGATDFINPND-LQSPIQDVLIHETDG-GLDWTFDCTGNVHVMRSALEACHKGWGQSIVIGVAAAGQEISTRPFQLVT----GRVWRGCAFGGVKGRSQLPDLVKEYLDHKLEIDKYITHRRPLKEINEAFTDMHNGNCIKTVLSI 379          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = -3
Query:  179 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMVPLNVIA-LACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLK 631
            GAA+IIG+D N  K +K +  G T+ +NP D   K I E++  +T   G+D+CFE  G   +L+ AL  +             +   V L +   L   GR+LKG+ FGG K++  +P L+     ++  L  L+TH + L++I++A++L+K
Sbjct:  216 GAARIIGVDVNKEKFKKAQELGATECLNPQDL-KKPIQEVLFDMTDA-GIDFCFEAIGNLDVLAAAL-ASCNESYGVCVVVGVLPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMK 364          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.761e-14
Identity = 50/167 (29.94%), Postives = 85/167 (50.90%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMV----PLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R+ GA++IIG+D    + E  + FG+ +F+NP  E +K + +++  +T+G GVD   ECTG    +  A E                        P+N +      RTLKGT +G  K ++DLP +++K    E +L + +TH V   EI+KA   + + + ++ +I
Sbjct:  216 RISGASRIIGVDLVSSRFELAKKFGVNEFVNPK-EHDKPVQQVIAEMTNG-GVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFL----NERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCII 376          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14
Identity = 54/194 (27.84%), Postives = 84/194 (43.30%), Query Frame = -3
Query:  149 AAWKEAKVEKXXXXXXXXXXXXXXXXXXXARMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 730
            AA   AKVE                     ++ GA +IIG+D NP K  K   FG T+ +NP D   + + E++  +T G GVDY FEC G   ++  ALE                              GR  K T FGG K+   +P L++   NK+ K+ + +TH +  + I++   L+     ++ ++T
Sbjct:  183 AALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHA-RPVQEVLVEMTDG-GVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGAGQEIATRPFQLVTGRVWKATAFGGWKSVESVPKLVEDYMNKKLKVDEFVTHTLPFDSINEGFDLMHAGKSIRCVLT 374          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = -3
Query:  149 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTM-VPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 631
            GAA+II +D N  K  K +  G T+ INP D  +K I E+++ +T G GVD+ FE  G    ++ AL +               +   + +N + L  G RT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++A  LL+    ++ ++T
Sbjct:  216 GAARIIAVDINKDKFAKAKELGATECINPQDY-SKPIQEVLQEMTDG-GVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQNLSMNPMLLLLG-RTWKGAIFGGFKSKDSVPKLVADFMAKKFPLDPLITHVLPFEKINEAFDLLRSGKSIRTVLT 374          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 2.299e-14
Identity = 52/161 (32.30%), Postives = 79/161 (49.07%), Query Frame = -3
Query:  149 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 631
            GAA+IIG+D N  K  K +  G T+ +NP D   K I E++  +++G GVD+ FE  G    +  AL                 D+        L   GRT KG  FGG K+K  +P L+     K+F L  L+TH +  E+I++   LL+    ++ ++T
Sbjct:  215 GAARIIGVDINKDKFAKAKEVGATECVNPQDY-KKPIQEVLTEMSNG-GVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGKSIRTILT 373          
The following BLAST results are available for this feature:
BLAST of CX671618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ADH1E_HORSE1.032e-1432.30Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
FRMA_HAEIN1.348e-1429.34S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
ADHP_RABIT1.348e-1432.92Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH1_TRIRP1.348e-1429.34Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
FADH2_SCHPO1.761e-1430.91Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH6_HUMAN1.761e-1433.55Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]
ADH1_PEA1.761e-1429.94Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADHH_GADMO2.299e-1427.84Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADH1_MOUSE2.299e-1433.33Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1S_HORSE2.299e-1432.30Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B08-D16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671618 ID=CX671618; Name=CX671618; organism=Citrus sinensis; type=EST; length=732bp
GCAAAAACTCCGTTCTTTCTTTATTACAAATTAGAGGTTTGGTGATGAGA
TTAGGAGTGAACATAAATAGAAGGGATCTCAAGAGCAGATCTTAAGATTT
TGATCACGAATTTAACACAAGGAGAGCATAGGATAAAACCGATCAAATCG
TGATCAGGACCTTGACACAATCAGGTTGCTTCAACAGCTGAATTGCCTTG
TCGATCTCTTCCAATTTAACATGATGGGTCAAGAGTTGATGGAGTTTAAA
TTCCTTGTTCTTGCATTTGTCAAGCAGTATCGGAAGGTCGGATTTTGTTT
TGATCCCACCAAAAGTGGTCCCTTTCAAAGTCCGACCACCACATGCAAGA
GCGATTACGTTCAGTGGCACCATGGTATCAACTCCCACCCCAATTACTAT
CACTTTTCCTTTTCCCACTTTTGTGGTTTCAAGTGCTTCAGAAAGTAAAG
ATGGAACCCCAGTGCACTCGAAGCAATAATCCACACCCATTCCATGAGTT
ATCCCCTTGACCAATTCTGAAATTGACTTGTTTGGTTCATCATCAGGGTT
TATGAAATCTGTCATTCCAAAAGCTTCCCCCTTTTCTTTTTTCCATGGGT
TCTTGTCTATCCCAATTATCTTAGCTGCCCCTTGCATCCTGGCTCCATCA
ACAGCCCCTAATCCAACAGTACCAAGGCCTAAAACAGCAACACTAGATCC
TTTTTCAACTTTGGCTTCCTTCCAAGCCGCCC
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