CX671618

Overview
NameCX671618
Unique NameCX671618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8500 contig Csv1_Contig8500:268..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14
Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R   A +II ID NP K E    FG TD INP+D  +K I +++  I    G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +  L   +TH + L+EI+ A  L+ +   ++ +I
Sbjct:  207 RQAKAGRIIAIDTNPKKFELARRFGATDCINPNDY-DKPIKDVLLDINK-WGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVI 367          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14
Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R   A +II ID NP K E    FG TD INP+D  +K I +++  I    G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +  L   +TH + L+EI+ A  L+ +   ++ +I
Sbjct:  207 RQAKAGRIIAIDTNPKKFELARRFGATDCINPNDY-DKPIKDVLLDINK-WGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVI 367          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14
Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R   A +II ID NP K E    FG TD INP+D  +K I +++  I    G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +  L   +TH + L+EI+ A  L+ +   ++ +I
Sbjct:  207 RQAKAGRIIAIDTNPKKFELARRFGATDCINPNDY-DKPIKDVLLDINK-WGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVI 367          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14
Identity = 51/167 (30.54%), Postives = 82/167 (49.10%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R   A +II ID NP K E    FG TD INP+D  +K I +++  I    G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +  L   +TH + L+EI+ A  L+ +   ++ +I
Sbjct:  207 RQAKAGRIIAIDTNPKKFELARRFGATDCINPNDY-DKPIKDVLLDINK-WGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVI 367          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH4_STRCA (Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH4 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.003e-14
Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = -3
Query:  182 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALE-TTXXXXXXXXXXXXXVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLL 631
            GA+KI GID N  K    +  G TD +NP D   K + E++  +T+G GVD+  EC G P ++  A E TT              +  +P + + L  G R +K T FGG K+   +P L+     K+F L  L++H + L++I+ A  L+
Sbjct:  220 GASKIFGIDINKDKFPLAKKLGATDCLNPQDI-RKPVQEIIAEMTNG-GVDFAIECIGNPDVMKAAFESTTVGWGTCVIVGVAVGEQSIPFSPMQLIMG-RKIKATFFGGWKSVKSVPKLVSDYMAKKFDLDALVSHTLPLDKINDAFDLM 367          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14
Identity = 50/169 (29.59%), Postives = 85/169 (50.30%), Query Frame = -3
Query:  146 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLITI 640
            R+ GA++II ID+NP K EK   FG TD + PD   +K IS+++  +T G G+DY FEC G   ++  ALE+                    +  P  ++     GRT KG  FGG K+   +P L+D     +  + + ++H +  + I++A  L+     ++ ++ +
Sbjct:  214 RVAGASRIIAIDRNPDKFEKARIFGATDCVVPDAS-DKPISQVLGEMTDG-GLDYTFECVGNVGIMRAALESCHKGWGVSVILGVAGGGQEISTRPFQLVT----GRTWKGAAFGGWKSVESVPKLVDDYMAGKIMVDEFVSHSLPFDSINEAFDLMHAGKSIRTVLQL 376          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14
Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = -3
Query:  149 GAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVDTMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLIT 631
            GA++IIGID N  K +K  A G T+ I+P D   K ISE++  +T G  V Y FE  G    + +AL +                  +      L   GRT KG  FGG K++ D+P L+ +   K+F L QL+TH +    I++  +LL     ++ ++T
Sbjct:  215 GASRIIGIDINKDKFQKALAVGATECISPKDS-TKPISEVLSDMT-GNTVQYTFEVIGRLETMVDALSSCHMNYGTSVVVGAPPSAKMLTYDPMLLFTGRTWKGCVFGGWKSRDDVPKLVTEFLEKKFDLDQLITHTLPFNNINEGFELLYSGKSIRTVLT 373          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 50/167 (29.94%), Postives = 82/167 (49.10%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R   A +II ID NP K +    FG TD INP+D  +K I +++  I    G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +  L   +TH + L+EI+ A  L+ +   ++ +I
Sbjct:  207 RQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDINK-WGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVI 367          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 50/167 (29.94%), Postives = 82/167 (49.10%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R   A +II ID NP K +    FG TD INP+D  +K I +++  I    G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +  L   +TH + L+EI+ A  L+ +   ++ +I
Sbjct:  207 RQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDINK-WGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVI 367          
BLAST of CX671618 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14
Identity = 50/167 (29.94%), Postives = 82/167 (49.10%), Query Frame = -3
Query:  152 RMQGAAKIIGIDKNPWKKEKGEAFGMTDFINPDDEPNKSISELVKGITHGMGVDYCFECTGVPSLLSEALETTXXXXXXXXXXXXXVD----TMVPLNVIALACGGRTLKGTTFGGIKTKSDLPILLDKCKNKEFKLHQLLTHHVKLEEIDKAIQLLKQPDCVKVLI 640
            R   A +II ID NP K +    FG TD INP+D  +K I +++  I    G+D+ FEC G  +++  ALE+                    +  P  ++     GR  KG+ FGG+K +S LP +++     +  L   +TH + L+EI+ A  L+ +   ++ +I
Sbjct:  207 RQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDY-DKPIKDVLLDINK-WGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGVAGSGQEISTRPFQLVT----GRVWKGSAFGGVKGRSQLPGMVEDAMKGDIDLEPFVTHTMSLDEINDAFDLMHEGKSIRTVI 367          
The following BLAST results are available for this feature:
BLAST of CX671618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FRMA_ECOUT3.003e-1430.54S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL63.003e-1430.54S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL53.003e-1430.54S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK13.003e-1430.54S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH4_STRCA3.003e-1433.77Alcohol dehydrogenase 4 OS=Struthio camelus GN=ADH... [more]
ADHX_MYXGL5.122e-1429.59Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
ADH7_MOUSE5.122e-1432.92Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
FRMA_SHISS6.690e-1429.94S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOSM6.690e-1429.94S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC6.690e-1429.94S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B08-D16-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671618 ID=CX671618; Name=CX671618; organism=Citrus sinensis; type=EST; length=732bp
GCAAAAACTCCGTTCTTTCTTTATTACAAATTAGAGGTTTGGTGATGAGA
TTAGGAGTGAACATAAATAGAAGGGATCTCAAGAGCAGATCTTAAGATTT
TGATCACGAATTTAACACAAGGAGAGCATAGGATAAAACCGATCAAATCG
TGATCAGGACCTTGACACAATCAGGTTGCTTCAACAGCTGAATTGCCTTG
TCGATCTCTTCCAATTTAACATGATGGGTCAAGAGTTGATGGAGTTTAAA
TTCCTTGTTCTTGCATTTGTCAAGCAGTATCGGAAGGTCGGATTTTGTTT
TGATCCCACCAAAAGTGGTCCCTTTCAAAGTCCGACCACCACATGCAAGA
GCGATTACGTTCAGTGGCACCATGGTATCAACTCCCACCCCAATTACTAT
CACTTTTCCTTTTCCCACTTTTGTGGTTTCAAGTGCTTCAGAAAGTAAAG
ATGGAACCCCAGTGCACTCGAAGCAATAATCCACACCCATTCCATGAGTT
ATCCCCTTGACCAATTCTGAAATTGACTTGTTTGGTTCATCATCAGGGTT
TATGAAATCTGTCATTCCAAAAGCTTCCCCCTTTTCTTTTTTCCATGGGT
TCTTGTCTATCCCAATTATCTTAGCTGCCCCTTGCATCCTGGCTCCATCA
ACAGCCCCTAATCCAACAGTACCAAGGCCTAAAACAGCAACACTAGATCC
TTTTTCAACTTTGGCTTCCTTCCAAGCCGCCC
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