CX671617

Overview
NameCX671617
Unique NameCX671617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12151 contig Csv1_Contig12151:97..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.056e-36
Identity = 85/243 (34.98%), Postives = 122/243 (50.21%), Query Frame = 1
Query:   67 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLML-DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +  Q ITCKA V W    P+ +E++QV PP++ EVRVK+L+ ++CHTD     G  P  L+P                        D VIP Y  EC++C+ C S  +NLC K   A   G+M+ D  SR S+ G+ +YH    ST+S+Y V+    V +++P   L     L CG +TG GA W  AKVE                     +  GA++IIGID +  K +  + FG+T+F+N
Sbjct:    5 TQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVN 247          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.204e-35
Identity = 84/241 (34.85%), Postives = 121/241 (50.21%), Query Frame = 1
Query:   70 NSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +++ I CKA V W  G+P+ +EE++V PPK+ EVR+K++  +VCHTD     G  P   +P                        D VIP Y+ +C +C+ C +  +NLC K       GLM DGTSR + +G+ + H    ST+SEY V+    V ++DP   L     L CG +TGYGAA   AKVE                     ++ GA++IIG+D N  K  K + FG ++ IN
Sbjct:    2 SAEVIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECIN 242          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.204e-35
Identity = 86/246 (34.96%), Postives = 126/246 (51.22%), Query Frame = 1
Query:   64 MSNS--QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLML-DGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            MSN+  Q I C+A V W  G+PL +EE++V PP++ EVR+K+L+ S+CHTD+   E     PL+PR                       D  +P + GEC +C +C S  SN+C    I  + G+ML D  SR S++GQ ++H    ST+SEY V+ A  V +++P   L     LSCG  TG GA    AK +                     R+ GA++IIG+D    + E  + FG+ +F+N
Sbjct:    1 MSNTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICTGLGATINVAKPKPGSSVAIFGLGAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVN 246          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.572e-35
Identity = 84/243 (34.57%), Postives = 121/243 (49.79%), Query Frame = 1
Query:   67 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIA--LNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +  Q ITCKA V W   +PL +E+++V PP++ EVR+++L+ ++CHTD     G  P  L+P                        D VIP+Y  EC +C+ C S  +NLC K   A  +  +M D  SR SV+G+ +YH    ST+S+Y V+    V ++ P   L     L CG  TG GA W  AKVE                     +  GA++IIGID +  K +  + FG+T+FIN
Sbjct:    2 TQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFIN 244          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FADH_YEAST (S-(hydroxymethyl)glutathione dehydrogenase OS=Saccharomyces cerevisiae GN=SFA1 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.053e-35
Identity = 91/238 (38.24%), Postives = 118/238 (49.58%), Query Frame = 1
Query:   82 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRM-SVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            I C A V +   +PL VEEI V+ PK+ EVR+K+ Y +VCHTD     G  P  L+P                        D VI  Y  EC  C+ CTS  +NLC         G+M DGT+R  + +G+ +YH   CST+SEY V+    VV +DP   L  A  L CG TTG+GAA K A V+K                    +++GA+KII ID N  KK+    FG TDF+N
Sbjct:   10 IKCIAAVAYDAKKPLSVEEITVDAPKAHEVRIKIEYTAVCHTDAYTLSGSDPEGLFPCVLGHEGAGIVESVGDDVITVKPGDHVIALYTAECGKCKFCTSGKTNLCGAVRATQGKGVMPDGTTRFHNAKGEDIYHFMGCSTFSEYTVVADVSVVAIDPKAPLDAACLLGCGVTTGFGAALKTANVQKGDTVAVFGCGTVGLSVIQGAKLRGASKIIAIDINNKKKQYCSQFGATDFVN 247          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.053e-35
Identity = 86/240 (35.83%), Postives = 121/240 (50.42%), Query Frame = 1
Query:   73 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            S  I CKA V W  G+PL +EEI+V PPK+ EVRVK++  +VCHTD     G  P   +P                        D VIP Y+ +C +C+ C +  +NLC K  +    G+M DGTSR + +G+++ H    ST+SEY V+    + +++ S  L     L CG +TGYGAA   AKVE                     ++ GA++IIGID N  K  K + FG T+ I+
Sbjct:    2 SGVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVMPDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECIS 241          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH7_MOUSE (Alcohol dehydrogenase class 4 mu/sigma chain OS=Mus musculus GN=Adh7 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.681e-35
Identity = 80/237 (33.76%), Postives = 121/237 (51.05%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V WG+ +P  +EEI+V PPK+ EVRVK+L   +C TD    +G     +P                        D VIP ++ +C++C  C +   NLC++  +   G++ DGT+R + +G+ + H  + ST++EY V+D + V +VD +     A  + CGF+TGYGAA K AKV                      +  GA++IIGID N  K +K  A G T+ I+
Sbjct:    6 KVIKCKAAVLWGVNQPFSIEEIEVAPPKAKEVRVKILATGICRTDDHIIKGSMVSKFPVIVGHEAVGVVESVGEGVTTVRPGDKVIPLFLPQCRECNACLNPEGNLCIRSDLTGCGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKVDGAAPPEKACLIGCGFSTGYGAAVKTAKVTPGSTCVVFGLGGVGLSVIMGCKAAGASRIIGIDINKDKFQKALAVGATECIS 242          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.681e-35
Identity = 84/239 (35.15%), Postives = 122/239 (51.05%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPI-ALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA + W + +PL +E+I+V PPK+ EVR+K+L   +C +D  + S  F  PL P                        D VIP +V +C  C +C S   NLC    + A  GLM DGTSR + +G+ L+H  S S+++EY V+  N VV++D +  L     + CGF+TGYGAA + AKVE                     +  GA++IIG+D N  K  K +  G T+ +N
Sbjct:    5 KVIKCKAAIAWEIKKPLSIEQIEVAPPKAHEVRIKILATGICRSDDHVISGAFKMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKVIPLFVPQCGKCSSCRSTRGNLCTSNDLSAATGLMPDGTSRFTCKGKSLHHFISTSSFTEYTVVHENSVVKIDAAAPLEKVCLIGCGFSTGYGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGATECVN 242          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.574e-35
Identity = 91/244 (37.30%), Postives = 122/244 (50.00%), Query Frame = 1
Query:   67 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVID--ANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +  + ITCKA V W   +PL +E+I+V+PP+  EVR+K+LY  VCHTD     G  P  ++P                        D VIP Y+ EC  C+ CTS  +NLC K  I    G M DGT+R   +G++++H    ST+S+Y V+   +  VVR D  +D      L CG TTG+GAA   AKVE+                       GA +IIGID N  K   G+ FG T+FIN
Sbjct:    3 TEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQMPDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLD--KVCLLGCGITTGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGCTEFIN 244          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 148.288 bits (373), Expect = 4.574e-35
Identity = 84/246 (34.15%), Postives = 121/246 (49.19%), Query Frame = 1
Query:   67 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEG-FPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLC-----LKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +  + I CKA + W  G+PL +EE++V PPK+ EVR++++  S+CHTD    +  F    +P                        D VIP Y   C+ C+ C S ++NLC     LK P +   LM D TSR + +G+ +YH F  ST+S+Y V+    + ++D   +L     L CGF+TGYGAA   AKV                      +  GA++IIGID N  K  K +A G TD +N
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLN 248          
The following BLAST results are available for this feature:
BLAST of CX671617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHX_ORYSJ7.056e-3634.98Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_HORSE1.204e-3534.85Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADH1_PEA1.204e-3534.96Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADHX_PEA1.572e-3534.57Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
FADH_YEAST2.053e-3538.24S-(hydroxymethyl)glutathione dehydrogenase OS=Sacc... [more]
ADHX_UROHA2.053e-3535.83Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADH7_MOUSE2.681e-3533.76Alcohol dehydrogenase class 4 mu/sigma chain OS=Mu... [more]
ADH1A_UROHA2.681e-3535.15Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADHX_DICDI4.574e-3537.30Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH4_HUMAN4.574e-3534.15Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B08-D16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671617 ID=CX671617; Name=CX671617; organism=Citrus sinensis; type=EST; length=787bp
ACTAGTTCCAGAGCTCATCTCCGCTCGAAATTCGAAGCTGCAAAATCTAC
AGCAATACTAACAATGAGCAATTCACAAGCCATAACGTGCAAAGCTGTGG
TATGCTGGGGTTTAGGAGAGCCATTAAAGGTAGAGGAGATACAAGTAGAG
CCTCCGAAATCAACTGAAGTTAGGGTTAAGATGCTTTATGCCAGTGTTTG
TCACACTGATATCCTTTGCTCTGAAGGATTCCCAGCGCCTCTCTATCCTC
GTGTTCTCGGGCACGAAGGTGTCGGGGTGGTGGAGAGTGTTGGGGATGAA
GTGAAAGAAGTAAAAGAAGGAGATATTGTGATTCCAACTTATGTTGGAGA
ATGCAAAGATTGTGAAAATTGCACATCACGAATCAGCAATTTATGCCTAA
AATATCCAATAGCACTGAACGGTTTAATGCTTGATGGCACTTCAAGAATG
TCCGTGAGAGGCCAAAAATTGTATCACATTTTTTCATGCTCCACTTGGTC
TGAATATATGGTCATCGATGCCAATTATGTAGTCAGAGTTGATCCAAGCA
TAGACCTTTCGCATGCTAGCTTCCTTTCATGTGGATTTACAACTGGTTAT
GGGGCGGCTTGGAAGGAAGCCAAAGTTGAAAAAGGATCTAGTGTTGCTGT
TTTAGGCCTTGGTACTGTTGGATTAGGGGCTGTTGATGGAGCCAGGATGC
AAGGGGCAGCTAAGATAATTGGGATAGACAAGAACCCATGGAAAAAAGAA
AAGGGGGAAGCTTTTGGAATGACAGATTTCATAAACC
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