CX671617

Overview
NameCX671617
Unique NameCX671617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12151 contig Csv1_Contig12151:97..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FADH_CANMA (S-(hydroxymethyl)glutathione dehydrogenase OS=Candida maltosa GN=FDH1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.127e-33
Identity = 84/237 (35.44%), Postives = 114/237 (48.10%), Query Frame = 1 
Query:   82 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            ITCKA V W   +PL +E++ V PPK  EVR+K+    VCHTD     G  P   +P                        D VI  Y  EC +C+ C S  +NLC K       G+M DGTSR + +G+++ H   CST+S+Y V+    VV ++P  +   A  L CG TTGYGAA   A V+K                      +GAA+II +D +  K+E G+  G T F+N
Sbjct:   10 ITCKAAVAWEAAKPLSIEDVTVAPPKRHEVRIKLYDTGVCHTDAYTLSGVDPEGAFPVILGHEGAGIVESIGEGVTNVKVGDHVIALYTPECGECKFCKSGKTNLCGKIRATQGKGVMPDGTSRFTCKGKEILHFMGCSTFSQYTVVADISVVAINPKAEFDKACLLGCGITTGYGAATITANVQKGDNVAVFGGGIVGLSVIQGCAERGAAQIILVDISDKKEEWGQKLGATAFVN 246
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.510e-33
Identity = 85/234 (36.32%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCIN 237
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.510e-33
Identity = 85/234 (36.32%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCIN 237
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.510e-33
Identity = 85/234 (36.32%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCIN 237
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.510e-33
Identity = 88/237 (37.13%), Postives = 109/237 (45.99%), Query Frame = 1 
Query:   82 ITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            I CKA V W    PL +E +QV PP+  EVR+K++ + VCHTD     G  P  L+P                        D VI  Y  ECK C+ C S  +NLC +       GLM DGTSR S  G  L H   CST+SEY V+    VV ++    L     L CG TTGYGAA   A +++                      + A +I GID NP KK    +FG TDFIN
Sbjct:   11 INCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGLFPVILGHEGAGIVESVGPQVTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGKGLMPDGTSRFSCNGNTLLHFMGCSTFSEYTVVADISVVAIERLAPLDSVCLLGCGITTGYGAATITADIKEGDSVAVFGLGSVGLAVIQGAVKKRAGRIFGIDVNPEKKNWAMSFGATDFIN 247
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33
Identity = 84/234 (35.90%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCIN 237
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33
Identity = 84/234 (35.90%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCIN 237
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33
Identity = 84/234 (35.90%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCIN 237
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33
Identity = 84/234 (35.90%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCIN 237
[Close]
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECOHS (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=frmA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33
Identity = 84/234 (35.90%), Postives = 108/234 (46.15%), Query Frame = 1 
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCIN 237
The following BLAST results are available for this feature:
BLAST of CX671617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
FADH_CANMA1.127e-3335.44S-(hydroxymethyl)glutathione dehydrogenase OS=Cand... [more]
FRMA_ECOUT2.510e-3336.32S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL52.510e-3336.32S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOK12.510e-3336.32S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FADH2_SCHPO2.510e-3337.13Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
FRMA_SHISS5.591e-3335.90S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOSM5.591e-3335.90S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLI5.591e-3335.90S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC5.591e-3335.90S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOHS5.591e-3335.90S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B08-D16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671617 ID=CX671617; Name=CX671617; organism=Citrus sinensis; type=EST; length=787bp
ACTAGTTCCAGAGCTCATCTCCGCTCGAAATTCGAAGCTGCAAAATCTAC
AGCAATACTAACAATGAGCAATTCACAAGCCATAACGTGCAAAGCTGTGG
TATGCTGGGGTTTAGGAGAGCCATTAAAGGTAGAGGAGATACAAGTAGAG
CCTCCGAAATCAACTGAAGTTAGGGTTAAGATGCTTTATGCCAGTGTTTG
TCACACTGATATCCTTTGCTCTGAAGGATTCCCAGCGCCTCTCTATCCTC
GTGTTCTCGGGCACGAAGGTGTCGGGGTGGTGGAGAGTGTTGGGGATGAA
GTGAAAGAAGTAAAAGAAGGAGATATTGTGATTCCAACTTATGTTGGAGA
ATGCAAAGATTGTGAAAATTGCACATCACGAATCAGCAATTTATGCCTAA
AATATCCAATAGCACTGAACGGTTTAATGCTTGATGGCACTTCAAGAATG
TCCGTGAGAGGCCAAAAATTGTATCACATTTTTTCATGCTCCACTTGGTC
TGAATATATGGTCATCGATGCCAATTATGTAGTCAGAGTTGATCCAAGCA
TAGACCTTTCGCATGCTAGCTTCCTTTCATGTGGATTTACAACTGGTTAT
GGGGCGGCTTGGAAGGAAGCCAAAGTTGAAAAAGGATCTAGTGTTGCTGT
TTTAGGCCTTGGTACTGTTGGATTAGGGGCTGTTGATGGAGCCAGGATGC
AAGGGGCAGCTAAGATAATTGGGATAGACAAGAACCCATGGAAAAAAGAA
AAGGGGGAAGCTTTTGGAATGACAGATTTCATAAACC
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