CX671617

Overview
NameCX671617
Unique NameCX671617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12151 contig Csv1_Contig12151:97..883. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33
Identity = 84/234 (35.90%), Postives = 108/234 (46.15%), Query Frame = 1
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCIN 237          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33
Identity = 84/234 (35.90%), Postives = 108/234 (46.15%), Query Frame = 1
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K +    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCIN 237          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 9.537e-33
Identity = 79/237 (33.33%), Postives = 112/237 (47.26%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W   +P  +EE++V PPK+ EVR+KM+ A +C +D     G      P                        D VIP ++ +C  C  C     NLCLK      G M DGTSR + RG+ ++H    ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A K AKV +                    +  GAA+IIG+D N  K  K +  G T+ +N
Sbjct:    6 KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.246e-32
Identity = 85/242 (35.12%), Postives = 114/242 (47.11%), Query Frame = 1
Query:   67 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAP-LYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +  Q I CKA V W  G+ L +EEI+V PP++ EVRVK+ +  VCHTD     G  A   +P                        D V+  Y  EC++C+ C S  +NLC K       GL+ DGTSR   +G+ L+H   CS++S+Y V+    VV+V           L CG TTGYGAA   AK+ K                      +GA++II ID N  KK   + FG T F+N
Sbjct:    3 TEGQIIKCKAAVAWEAGKDLSIEEIEVLPPRAHEVRVKVEFTGVCHTDAYTLSGADAEGSFPVVFGHEGAGVVESVGEGVESVKVGDSVVLLYTPECRECKFCLSGKTNLCGKIRATQGKGLLPDGTSRFRCKGKDLFHYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFVN 244          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1A_PONAB (Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A PE=2 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.246e-32
Identity = 80/238 (33.61%), Postives = 113/238 (47.48%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W L +P  +EE++V PPK+ EVR+KM+   +C TD     G      P                        D VIP  V +C  C  C +  SN CLK  ++   G + DGTSR + RG+ ++H    ST+S+Y V+D N V ++D +  L+    + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ IN
Sbjct:    6 KVIKCKAAVLWELKKPFSIEEVEVAPPKAQEVRIKMVAVGICGTDDHVVSGTMVTPLPAILGHEAAGIVESVGEGVTTVKPGDKVIPLAVPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRGKPIHHFLGISTFSQYTVVDENAVAKIDAASPLAKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECIN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 85/234 (36.32%), Postives = 108/234 (46.15%), Query Frame = 1
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +G G PL++ EI V PPK  EV VK+ +  VCHTD     G  P  L+P                        D VIP Y  EC +C+ CTS  +NLC+        G+M D TSR  V GQ LYH   CST+SEY V+    + +++P  +      L CG TTG GA    AKV++                    R   A +I  ID NP K E  + FG TD IN
Sbjct:    4 RAAVAFGPGLPLEIVEIDVAPPKKGEVLVKISHTGVCHTDAYTLSGDDPEGLFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECDFCTSGKTNLCVAVRETQGKGVMPDATSRFFVNGQPLYHYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFGATDCIN 237          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADHP_RABIT (Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctolagus cuniculus GN=ADH2-1 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 79/246 (32.11%), Postives = 117/246 (47.56%), Query Frame = 1
Query:   67 SNSQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKY-----PIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +  + I CKA + W  G+PL +EE++V PPK+ EVRV++  A +C +D  + +  F     P                        D VIP Y+  CK C+ C S ++N C K+     P+    LM D TSR + +G+ +YH F  S +S+Y V+    + ++D   +L     + CGF+TGYGAA   AKV                      +  GA++II ID N  K  K +A G TD +N
Sbjct:    3 TKGKVIKCKAAIAWEAGKPLSIEEVEVAPPKAHEVRVQINAAGLCRSDTHVINPKFEGAFLPVILGHEGAGIVESVGPGVTNVKPGDKVIPLYIPHCKKCKFCLSPLTNFCEKFCKGKNPLIEQELMEDKTSRFTCKGKSIYHFFGISAFSQYTVVKDVNLAKIDDDANLERVCLIGCGFSTGYGAAINTAKVTPGSTCAVFGLGGVGLSAIMGCKTAGASRIIAIDINSDKFAKAKALGATDCLN 248          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 79/238 (33.19%), Postives = 114/238 (47.90%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIA-LNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W   +P  +EE++V PPK+ EVRVK++   +C +D     G     +P                        D VIP +V +C +C  C S   NLC K  I   + LM DGTSR + +G+ ++H    ST++EY V+    V ++D +  L     + CGF+TGYGAA + AKVE                     +  GA++IIG+D N  K  K +  G TD +N
Sbjct:    5 KVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRVKIIATGICRSDDHVISGVLVMPFPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSVCLSTKGNLCRKNDIGPASALMPDGTSRFTCKGKAIHHFAGTSTFTEYTVLHETAVAKIDAAAPLEKVCLIGCGFSTGYGAALQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKELGATDCVN 242          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.627e-32
Identity = 75/239 (31.38%), Postives = 116/239 (48.54%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN--GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W   +P  +EE++V PPK+ EVR+K++   +C +D     G  A  +P                        D VIP +V +C +C +C S   NLC+K  ++ +  GLM DGT+R + +G+ ++H    ST++EY V+      ++D +  L     + CGF+TGYGA  + AKVE                     +  GA++II ID N  K  K +  G T+ +N
Sbjct:    5 KVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMPFPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFIGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFSTGYGAVLQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATECVN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.125e-32
Identity = 84/234 (35.90%), Postives = 107/234 (45.73%), Query Frame = 1
Query:   91 KAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +A V +  G+PL++ EI V PPK  EV +K+ +  VCHTD     G  P  ++P                        D VIP Y   C +CE C S  +NLC+        GLM DGT+R S  GQ LYH   CST+SEY V+    + +++P  +  H   L CG TTG GA    AKV+                     R   A +II ID NP K E    FG TD IN
Sbjct:    4 RAAVAFAPGKPLEIVEIDVAPPKKGEVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTEXCGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCIN 237          
The following BLAST results are available for this feature:
BLAST of CX671617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
FRMA_ECO575.591e-3335.90S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO245.591e-3335.90S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
ADH1S_HORSE9.537e-3333.33Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
FADH_PICPA1.246e-3235.12S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH1A_PONAB1.246e-3233.61Alcohol dehydrogenase 1A OS=Pongo abelii GN=ADH1A ... [more]
FRMA_PASPI1.627e-3236.32S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
ADHP_RABIT1.627e-3232.11Alcohol dehydrogenase class-2 isozyme 1 OS=Oryctol... [more]
ADH1_STRCA1.627e-3233.19Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH1_COTJA1.627e-3231.38Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
FRMA_ECOL62.125e-3235.90S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B08-D16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671617 ID=CX671617; Name=CX671617; organism=Citrus sinensis; type=EST; length=787bp
ACTAGTTCCAGAGCTCATCTCCGCTCGAAATTCGAAGCTGCAAAATCTAC
AGCAATACTAACAATGAGCAATTCACAAGCCATAACGTGCAAAGCTGTGG
TATGCTGGGGTTTAGGAGAGCCATTAAAGGTAGAGGAGATACAAGTAGAG
CCTCCGAAATCAACTGAAGTTAGGGTTAAGATGCTTTATGCCAGTGTTTG
TCACACTGATATCCTTTGCTCTGAAGGATTCCCAGCGCCTCTCTATCCTC
GTGTTCTCGGGCACGAAGGTGTCGGGGTGGTGGAGAGTGTTGGGGATGAA
GTGAAAGAAGTAAAAGAAGGAGATATTGTGATTCCAACTTATGTTGGAGA
ATGCAAAGATTGTGAAAATTGCACATCACGAATCAGCAATTTATGCCTAA
AATATCCAATAGCACTGAACGGTTTAATGCTTGATGGCACTTCAAGAATG
TCCGTGAGAGGCCAAAAATTGTATCACATTTTTTCATGCTCCACTTGGTC
TGAATATATGGTCATCGATGCCAATTATGTAGTCAGAGTTGATCCAAGCA
TAGACCTTTCGCATGCTAGCTTCCTTTCATGTGGATTTACAACTGGTTAT
GGGGCGGCTTGGAAGGAAGCCAAAGTTGAAAAAGGATCTAGTGTTGCTGT
TTTAGGCCTTGGTACTGTTGGATTAGGGGCTGTTGATGGAGCCAGGATGC
AAGGGGCAGCTAAGATAATTGGGATAGACAAGAACCCATGGAAAAAAGAA
AAGGGGGAAGCTTTTGGAATGACAGATTTCATAAACC
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